CuGenDBv2

Gene ID	Spg021663
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	VPS13_C domain-containing protein
Genome location	scaffold2:17230449..17237031
RNA-Seq Expression	Spg021663
Synteny	Spg021663
Gene Ontology terms	NA
InterPro domains	IPR026847 - Vacuolar protein sorting-associated protein 13

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022988633.1 uncharacterized protein LOC111485823 isoform X1 [Cucurbita maxima]

2.6e-118

89.62

Show/hide

Query:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD
        +GLTGLLQSPIRGAERHGLPGV SGIALGITGLVAKPAASVLELTGKTAQSIRNRSRL+QMRPQ LRVRLPRPLSS+LPLRPFSWEEAIGTS+LLEAGGD
Subjt:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD

Query:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHAD--NDGAVVHIVGSSSDLLSRPNKSHQK--IR
        DMKLN+EVLVACKALKLAGKFVVITQSLILIVSCA+LVD GKPEFRG+AADSKWVIES I  DTVI+AD   DGAVVHIVGSSSDLLSR NKSHQK  I 
Subjt:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHAD--NDGAVVHIVGSSSDLLSRPNKSHQK--IR

Query:  SSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGW-RGHVLHRYDVK
        +SSR VRW  PTPLPIFETNLELELKEDAENLLKILLSTI+LAKERGW RGHVLHRYDVK
Subjt:  SSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGW-RGHVLHRYDVK

XP_022988634.1 uncharacterized protein LOC111485823 isoform X2 [Cucurbita maxima]

2.6e-118

89.62

Show/hide

Query:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD
        +GLTGLLQSPIRGAERHGLPGV SGIALGITGLVAKPAASVLELTGKTAQSIRNRSRL+QMRPQ LRVRLPRPLSS+LPLRPFSWEEAIGTS+LLEAGGD
Subjt:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD

Query:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHAD--NDGAVVHIVGSSSDLLSRPNKSHQK--IR
        DMKLN+EVLVACKALKLAGKFVVITQSLILIVSCA+LVD GKPEFRG+AADSKWVIES I  DTVI+AD   DGAVVHIVGSSSDLLSR NKSHQK  I 
Subjt:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHAD--NDGAVVHIVGSSSDLLSRPNKSHQK--IR

Query:  SSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGW-RGHVLHRYDVK
        +SSR VRW  PTPLPIFETNLELELKEDAENLLKILLSTI+LAKERGW RGHVLHRYDVK
Subjt:  SSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGW-RGHVLHRYDVK

XP_022988635.1 uncharacterized protein LOC111485823 isoform X3 [Cucurbita maxima]

2.6e-118

89.62

Show/hide

Query:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD
        +GLTGLLQSPIRGAERHGLPGV SGIALGITGLVAKPAASVLELTGKTAQSIRNRSRL+QMRPQ LRVRLPRPLSS+LPLRPFSWEEAIGTS+LLEAGGD
Subjt:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD

Query:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHAD--NDGAVVHIVGSSSDLLSRPNKSHQK--IR
        DMKLN+EVLVACKALKLAGKFVVITQSLILIVSCA+LVD GKPEFRG+AADSKWVIES I  DTVI+AD   DGAVVHIVGSSSDLLSR NKSHQK  I 
Subjt:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHAD--NDGAVVHIVGSSSDLLSRPNKSHQK--IR

Query:  SSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGW-RGHVLHRYDVK
        +SSR VRW  PTPLPIFETNLELELKEDAENLLKILLSTI+LAKERGW RGHVLHRYDVK
Subjt:  SSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGW-RGHVLHRYDVK

XP_023516584.1 uncharacterized protein LOC111780422 isoform X1 [Cucurbita pepo subsp. pepo]

1.3e-117

89.23

Show/hide

Query:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD
        +GLTGLLQSPI+GAERHGLPGV SGIALGITGLVAKPAASVLELTGKTAQSIRNRSRL+QMRPQ LRVRLPRPLSSVLPLRPFSWEEAIGTS+LLEAGGD
Subjt:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD

Query:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHAD--NDGAVVHIVGSSSDLLSRPNKSHQK--IR
        DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCA+LVD GKPEFRG+AADSKWVIES I  DTVI+AD   DGAVVHIVGSSSDLLS  NKSHQK  I 
Subjt:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHAD--NDGAVVHIVGSSSDLLSRPNKSHQK--IR

Query:  SSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGW-RGHVLHRYDVK
        +SSR VRW  PTPLPIFETNLELELKEDA+NLLKILLSTI+LAKERGW RGHVLHRYDVK
Subjt:  SSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGW-RGHVLHRYDVK

XP_023516585.1 uncharacterized protein LOC111780422 isoform X2 [Cucurbita pepo subsp. pepo]

1.3e-117

89.23

Show/hide

Query:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD
        +GLTGLLQSPI+GAERHGLPGV SGIALGITGLVAKPAASVLELTGKTAQSIRNRSRL+QMRPQ LRVRLPRPLSSVLPLRPFSWEEAIGTS+LLEAGGD
Subjt:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD

Query:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHAD--NDGAVVHIVGSSSDLLSRPNKSHQK--IR
        DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCA+LVD GKPEFRG+AADSKWVIES I  DTVI+AD   DGAVVHIVGSSSDLLS  NKSHQK  I 
Subjt:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHAD--NDGAVVHIVGSSSDLLSRPNKSHQK--IR

Query:  SSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGW-RGHVLHRYDVK
        +SSR VRW  PTPLPIFETNLELELKEDA+NLLKILLSTI+LAKERGW RGHVLHRYDVK
Subjt:  SSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGW-RGHVLHRYDVK

TrEMBL top hits

e value

%identity

Alignment

A0A6J1H814 uncharacterized protein LOC111461381 isoform X1

3.1e-117

88.85

Show/hide

Query:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD
        +GLTGLLQSPI+GAERHGLPGV SGIALGITGLVAKPAASVLELTGKTAQSIRNRSRL+QMRPQ LRVRLPRPLSSVLPLRPFSWEEAIGTS+LLEAGGD
Subjt:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD

Query:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHAD--NDGAVVHIVGSSSDLLSRPNKSHQK--IR
        DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCA+LVD GKPEFRG+AADSKW IES I  DTVI+AD   DGAVVHIVGSSSDLLSR N SHQK  I 
Subjt:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHAD--NDGAVVHIVGSSSDLLSRPNKSHQK--IR

Query:  SSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGW-RGHVLHRYDVK
        +SSR VRW  PTPLPIFETNLELEL EDAENLLKILLSTI+LAKERGW RGHVLHRYDVK
Subjt:  SSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGW-RGHVLHRYDVK

A0A6J1HBP0 uncharacterized protein LOC111461381 isoform X3

3.1e-117

88.85

Show/hide

Query:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD
        +GLTGLLQSPI+GAERHGLPGV SGIALGITGLVAKPAASVLELTGKTAQSIRNRSRL+QMRPQ LRVRLPRPLSSVLPLRPFSWEEAIGTS+LLEAGGD
Subjt:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD

Query:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHAD--NDGAVVHIVGSSSDLLSRPNKSHQK--IR
        DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCA+LVD GKPEFRG+AADSKW IES I  DTVI+AD   DGAVVHIVGSSSDLLSR N SHQK  I 
Subjt:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHAD--NDGAVVHIVGSSSDLLSRPNKSHQK--IR

Query:  SSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGW-RGHVLHRYDVK
        +SSR VRW  PTPLPIFETNLELEL EDAENLLKILLSTI+LAKERGW RGHVLHRYDVK
Subjt:  SSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGW-RGHVLHRYDVK

A0A6J1JK45 uncharacterized protein LOC111485823 isoform X3

1.3e-118

89.62

Show/hide

Query:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD
        +GLTGLLQSPIRGAERHGLPGV SGIALGITGLVAKPAASVLELTGKTAQSIRNRSRL+QMRPQ LRVRLPRPLSS+LPLRPFSWEEAIGTS+LLEAGGD
Subjt:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD

Query:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHAD--NDGAVVHIVGSSSDLLSRPNKSHQK--IR
        DMKLN+EVLVACKALKLAGKFVVITQSLILIVSCA+LVD GKPEFRG+AADSKWVIES I  DTVI+AD   DGAVVHIVGSSSDLLSR NKSHQK  I 
Subjt:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHAD--NDGAVVHIVGSSSDLLSRPNKSHQK--IR

Query:  SSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGW-RGHVLHRYDVK
        +SSR VRW  PTPLPIFETNLELELKEDAENLLKILLSTI+LAKERGW RGHVLHRYDVK
Subjt:  SSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGW-RGHVLHRYDVK

A0A6J1JM44 uncharacterized protein LOC111485823 isoform X2

1.3e-118

89.62

Show/hide

Query:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD
        +GLTGLLQSPIRGAERHGLPGV SGIALGITGLVAKPAASVLELTGKTAQSIRNRSRL+QMRPQ LRVRLPRPLSS+LPLRPFSWEEAIGTS+LLEAGGD
Subjt:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD

Query:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHAD--NDGAVVHIVGSSSDLLSRPNKSHQK--IR
        DMKLN+EVLVACKALKLAGKFVVITQSLILIVSCA+LVD GKPEFRG+AADSKWVIES I  DTVI+AD   DGAVVHIVGSSSDLLSR NKSHQK  I 
Subjt:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHAD--NDGAVVHIVGSSSDLLSRPNKSHQK--IR

Query:  SSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGW-RGHVLHRYDVK
        +SSR VRW  PTPLPIFETNLELELKEDAENLLKILLSTI+LAKERGW RGHVLHRYDVK
Subjt:  SSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGW-RGHVLHRYDVK

A0A6J1JMV4 uncharacterized protein LOC111485823 isoform X1

1.3e-118

89.62

Show/hide

Query:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD
        +GLTGLLQSPIRGAERHGLPGV SGIALGITGLVAKPAASVLELTGKTAQSIRNRSRL+QMRPQ LRVRLPRPLSS+LPLRPFSWEEAIGTS+LLEAGGD
Subjt:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD

Query:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHAD--NDGAVVHIVGSSSDLLSRPNKSHQK--IR
        DMKLN+EVLVACKALKLAGKFVVITQSLILIVSCA+LVD GKPEFRG+AADSKWVIES I  DTVI+AD   DGAVVHIVGSSSDLLSR NKSHQK  I 
Subjt:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHAD--NDGAVVHIVGSSSDLLSRPNKSHQK--IR

Query:  SSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGW-RGHVLHRYDVK
        +SSR VRW  PTPLPIFETNLELELKEDAENLLKILLSTI+LAKERGW RGHVLHRYDVK
Subjt:  SSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGW-RGHVLHRYDVK

SwissProt top hits

e value

%identity

Alignment

P87319 Vacuolar protein sorting-associated protein 13a

8.2e-06

32.97

Show/hide

Query:  RQGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIG
        R G+ GL   PI GA R+GLPG++ G+  G+ G   KP   + +     ++  RN + +   R    ++RL R +S    + PF   EA+G
Subjt:  RQGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIG

Q555C6 Putative vacuolar protein sorting-associated protein 13B

1.7e-11

30.5

Show/hide

Query:  GLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGDD
        G+ G+++ P+RGA + GL G   G   G+ G+  KP   V +   KT++ IRN + +H   P+R R+R PR ++   P++ +S +E+ G  LL +   D 
Subjt:  GLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGDD

Query:  MKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGK
         K     L    + K+  KF V+     L+++  +L+   K
Subjt:  MKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGK

Q5THJ4 Vacuolar protein sorting-associated protein 13D

5.7e-07

28.39

Show/hide

Query:  GLTGLLQSPIRGAERH-GLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRP-FSWEEAIGTSLLLEAGG
        GLT ++ S + G +   G+ G ISG+  G+ G V KP A  L+   +TAQ++R+ + L   R Q  RVR PR  +    L P +S  +A G   L +   
Subjt:  GLTGLLQSPIRGAERH-GLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRP-FSWEEAIGTSLLLEAGG

Query:  DDMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHADNDGAVVHIVGSSSDLLSRPNKSHQK----I
        +   + DE  +A +   +    V+I+   +  +   + VD  +  F  +  D   +    +S D   H      V     S+S  +S P  SHQK    +
Subjt:  DDMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHADNDGAVVHIVGSSSDLLSRPNKSHQK----I

Query:  RSSSRAVRW---IVPTPLPIFETNLELELKEDAENL
        +S   AV+    I       +E  L L L E+ E L
Subjt:  RSSSRAVRW---IVPTPLPIFETNLELELKEDAENL

Q96RL7 Vacuolar protein sorting-associated protein 13A

2.4e-05

26.88

Show/hide

Query:  GLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLL
        G+TG++  PI+GA++ G  G   G+  G+ G VA+P   ++++   T Q I+  +   ++      +R PR  +    +RP+   +  G  +L
Subjt:  GLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLL

Q9BGZ0 Vacuolar protein sorting-associated protein 13A (Fragment)

1.4e-05

26.88

Show/hide

Query:  GLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLL
        G+TG++  PI+GA++ G  G   G+  G+ G VA+P   ++++   T Q I+  +   ++      +R PR  +    +RP+   +  G  +L
Subjt:  GLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLL

Arabidopsis top hits

e value

%identity

Alignment

AT5G24740.1 Protein of unknown function (DUF1162)

3.0e-72

57.25

Show/hide

Query:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD
        +GLTGLLQSPIRGAE+HGLPGVISG+A+GITGLVA+P AS+LE+TGKTAQSIRNRSR+H +R QR R+RLPRPLS   PLRP+SWEEA+GT++L+E  GD
Subjt:  QGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSSVLPLRPFSWEEAIGTSLLLEAGGD

Query:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHADNDGAVVHIVGSSSDLLSRPNKSHQKIRSSSR
         +K   E LV CKALK  G FVVIT  L+L++S  +LVDF K  F G+  D  W IE  I  ++VIH D  G VV I+GS+SD +    +  QK +SS  
Subjt:  DMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHADNDGAVVHIVGSSSDLLSRPNKSHQKIRSSSR

Query:  AVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGWRGH-VLHRYDV
          RW  P+  P+ +TNLE   +E+AE+LL +LLSTI+  K R W    VL R ++
Subjt:  AVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGWRGH-VLHRYDV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACGACCAAGAAAGTCTCGACTAACGTAAGTGGAGACCCATCCTTGGTTGGTAAAGAGACGGAATCTACCCCCGTCCTCTCACCACAAGAAACAACTGTACGCTTGCT
GTCAATTGAAGATGACGTGTGTGAGATCAAGAAGATATTGGAACTAATATTGGAAAGAATCAGCAGCAAGACTGAACAAATGGGTTTGAATCTGACAGCACAAACAAATT
GGGAAAAAGAACCACAAAACCGCCAAGAGGAAAGTAGTAAGACAAAATTCCAACAAGATAGGCAAATTGGTGATCAAAGGAAGGTTCAAGAATGGGACACGGCTCCAAAG
AAATATCAAGATTGGGATGCGGTGCCCAAGAGATTTCAAGAATGGGATACGGCTCCAAAGAGATATCAAGATTGGCGCATGGCTCCAAAAAGGACACACAGGCAGGGGCT
CACTGGTCTTCTTCAATCACCAATCAGAGGAGCTGAGAGACATGGTCTTCCAGGAGTCATCTCAGGCATTGCATTAGGAATCACAGGACTTGTGGCAAAACCTGCTGCCA
GTGTTCTAGAACTTACTGGAAAAACCGCCCAGAGCATTCGAAACAGAAGTAGGTTACATCAAATGAGACCGCAGCGCCTTAGAGTACGTCTTCCTCGGCCCTTAAGCAGT
GTGCTTCCGCTGAGGCCTTTCTCCTGGGAAGAAGCAATCGGAACATCGCTACTTCTGGAGGCTGGAGGAGATGACATGAAGCTTAATGATGAAGTTTTAGTTGCCTGCAA
AGCACTTAAACTAGCTGGAAAATTTGTCGTCATCACCCAGAGTTTAATCTTAATTGTTAGTTGTGCGAACTTAGTGGACTTCGGCAAGCCTGAATTTCGGGGCATTGCTG
CTGATTCCAAATGGGTGATTGAATCAGCCATCAGTTCGGACACTGTCATTCATGCCGATAATGATGGAGCTGTCGTGCACATTGTCGGAAGCAGTTCTGACTTATTATCC
AGGCCAAATAAATCTCACCAGAAGATTCGTAGTAGTAGTAGGGCAGTGAGATGGATTGTTCCAACTCCTCTTCCTATTTTTGAGACAAACCTTGAACTGGAACTCAAGGA
AGATGCAGAAAATCTGTTAAAGATCTTGTTGTCTACGATCAAATTAGCGAAAGAGCGAGGCTGGCGAGGTCATGTTCTCCATCGATATGATGTAAAATAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MTTKKVSTNVSGDPSLVGKETESTPVLSPQETTVRLLSIEDDVCEIKKILELILERISSKTEQMGLNLTAQTNWEKEPQNRQEESSKTKFQQDRQIGDQRKVQEWDTAPK
KYQDWDAVPKRFQEWDTAPKRYQDWRMAPKRTHRQGLTGLLQSPIRGAERHGLPGVISGIALGITGLVAKPAASVLELTGKTAQSIRNRSRLHQMRPQRLRVRLPRPLSS
VLPLRPFSWEEAIGTSLLLEAGGDDMKLNDEVLVACKALKLAGKFVVITQSLILIVSCANLVDFGKPEFRGIAADSKWVIESAISSDTVIHADNDGAVVHIVGSSSDLLS
RPNKSHQKIRSSSRAVRWIVPTPLPIFETNLELELKEDAENLLKILLSTIKLAKERGWRGHVLHRYDVK

Spg021663 (gene) of Sponge gourd (cylindrica) v1 genome