CuGenDBv2

Gene ID	Spg021678
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	zinc finger CCCH domain-containing protein 16 isoform X1
Genome location	scaffold2:17397896..17399898
RNA-Seq Expression	Spg021678
Synteny	Spg021678
Gene Ontology terms	NA
InterPro domains	IPR045072 - MKRN-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6588269.1 Zinc finger CCCH domain-containing protein 16, partial [Cucurbita argyrosperma subsp. sororia]

7.7e-23

59.63

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Query:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNS-QQQKPNPFGFGVHSTSQSKAAAD
        MHY+KEPCRNFQRG                                C +GERCKFLHV QQ QK S+FGSGMQT+S QQQKPNPFGFGVHST QSKAA D
Subjt:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNS-QQQKPNPFGFGVHSTSQSKAAAD

Query:  IGSKQNQYK
         GSKQNQYK
Subjt:  IGSKQNQYK

KAG7022189.1 Zinc finger CCCH domain-containing protein 16 [Cucurbita argyrosperma subsp. argyrosperma]

7.7e-23

59.63

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Query:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNS-QQQKPNPFGFGVHSTSQSKAAAD
        MHY+KEPCRNFQRG                                C +GERCKFLHV QQ QK S+FGSGMQT+S QQQKPNPFGFGVHST QSKAA D
Subjt:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNS-QQQKPNPFGFGVHSTSQSKAAAD

Query:  IGSKQNQYK
         GSKQNQYK
Subjt:  IGSKQNQYK

XP_022925231.1 zinc finger CCCH domain-containing protein 16 isoform X1 [Cucurbita moschata]

7.7e-23

59.63

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Query:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNS-QQQKPNPFGFGVHSTSQSKAAAD
        MHY+KEPCRNFQRG                                C +GERCKFLHV QQ QK S+FGSGMQT+S QQQKPNPFGFGVHST QSKAA D
Subjt:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNS-QQQKPNPFGFGVHSTSQSKAAAD

Query:  IGSKQNQYK
         GSKQNQYK
Subjt:  IGSKQNQYK

XP_023005674.1 zinc finger CCCH domain-containing protein 16 isoform X1 [Cucurbita maxima]

2.2e-22

58.72

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Query:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNS-QQQKPNPFGFGVHSTSQSKAAAD
        MHY+KEPCRNFQRG                                C +GERCKFLHV QQ QK S+FGSGMQT+S QQQKPNPFGFGVHS+ QSKAA D
Subjt:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNS-QQQKPNPFGFGVHSTSQSKAAAD

Query:  IGSKQNQYK
         GSKQNQYK
Subjt:  IGSKQNQYK

XP_023520667.1 zinc finger CCCH domain-containing protein 16 [Cucurbita pepo subsp. pepo]

7.7e-23

59.63

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Query:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNSQ-QQKPNPFGFGVHSTSQSKAAAD
        MHY+KEPCRNFQRG                                C +GERCKFLHV QQ QK S+FGSGMQT+SQ QQKPNPFGFGVHST QSKAA D
Subjt:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNSQ-QQKPNPFGFGVHSTSQSKAAAD

Query:  IGSKQNQYK
         GSKQNQYK
Subjt:  IGSKQNQYK

TrEMBL top hits

e value

%identity

Alignment

A0A061GS52 Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform 1

8.0e-18

51.38

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Query:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNS-QQQKPNPFGFGVHSTSQSKAAAD
        MHY+KEPCRNFQRG                                C +GERCKFLHV QQQ KS++FG G Q +S QQQKPNPFGFGV +  QSK A D
Subjt:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNS-QQQKPNPFGFGVHSTSQSKAAAD

Query:  IGSKQNQYK
         G+KQNQ+K
Subjt:  IGSKQNQYK

A0A6J1CTC5 zinc finger CCCH domain-containing protein 16

4.3e-19

53.21

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Query:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNSQ-QQKPNPFGFGVHSTSQSKAAAD
        M Y+K+ CRNFQRG                                C +GERC+++H  QQ Q S SFG GMQT+SQ QQKPNPFGFGVHST QSKAAAD
Subjt:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNSQ-QQKPNPFGFGVHSTSQSKAAAD

Query:  IGSKQNQYK
         GSKQNQYK
Subjt:  IGSKQNQYK

A0A6J1DLN7 zinc finger CCCH domain-containing protein 16-like

4.3e-19

53.21

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Query:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNSQ-QQKPNPFGFGVHSTSQSKAAAD
        M Y+K+ CRNFQRG                                C +GERC+++H  QQ Q S SFG GMQT+SQ QQKPNPFGFGVHST QSKAAAD
Subjt:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNSQ-QQKPNPFGFGVHSTSQSKAAAD

Query:  IGSKQNQYK
         GSKQNQYK
Subjt:  IGSKQNQYK

A0A6J1EHE7 zinc finger CCCH domain-containing protein 16 isoform X1

3.7e-23

59.63

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Query:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNS-QQQKPNPFGFGVHSTSQSKAAAD
        MHY+KEPCRNFQRG                                C +GERCKFLHV QQ QK S+FGSGMQT+S QQQKPNPFGFGVHST QSKAA D
Subjt:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNS-QQQKPNPFGFGVHSTSQSKAAAD

Query:  IGSKQNQYK
         GSKQNQYK
Subjt:  IGSKQNQYK

A0A6J1KZY0 zinc finger CCCH domain-containing protein 16 isoform X1

1.1e-22

58.72

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Query:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNS-QQQKPNPFGFGVHSTSQSKAAAD
        MHY+KEPCRNFQRG                                C +GERCKFLHV QQ QK S+FGSGMQT+S QQQKPNPFGFGVHS+ QSKAA D
Subjt:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNS-QQQKPNPFGFGVHSTSQSKAAAD

Query:  IGSKQNQYK
         GSKQNQYK
Subjt:  IGSKQNQYK

SwissProt top hits

e value

%identity

Alignment

Q5Z807 Zinc finger CCCH domain-containing protein 46

3.7e-04

36.04

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Query:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSG-MQTNSQQQKPNPFGFGVHSTSQSKAAAD
        M   +E CRNFQRG C      R+       +  Q        P    FG        G +QQ+  SFGS   Q   QQQKPNPFGFGV   +     A 
Subjt:  MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSG-MQTNSQQQKPNPFGFGVHSTSQSKAAAD

Query:  IGSKQNQYKFV
          +K  Q K+V
Subjt:  IGSKQNQYKFV

Q9FWS3 Zinc finger CCCH domain-containing protein 16

2.9e-04

35.05

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Query:  KEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNSQQQK------PNPFGFGVHSTSQSK
        KE CRNFQRG                                C +GE C+FLH  QQ + ++ FG G Q   QQQ+       NPFGFGV S   S+
Subjt:  KEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNSQQQK------PNPFGFGVHSTSQSK

Arabidopsis top hits

e value

%identity

Alignment

AT1G75340.1 Zinc finger C-x8-C-x5-C-x3-H type family protein

2.0e-05

35.05

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Query:  KEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNSQQQK------PNPFGFGVHSTSQSK
        KE CRNFQRG                                C +GE C+FLH  QQ + ++ FG G Q   QQQ+       NPFGFGV S   S+
Subjt:  KEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNSQQQK------PNPFGFGVHSTSQSK

AT1G75340.2 Zinc finger C-x8-C-x5-C-x3-H type family protein

3.7e-07

39.8

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Query:  KEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTI-YSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNSQQQK------PNPFGFGVHSTSQSK
        KE CRNFQRG  G            F  YI         + R C +GE C+FLH  QQ + ++ FG G Q   QQQ+       NPFGFGV S   S+
Subjt:  KEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTI-YSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNSQQQK------PNPFGFGVHSTSQSK

Sequences

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CDS sequence

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ATGCATTACGAGAAAGAACCCTGCAGAAATTTTCAGCGTGGCAGGTGTGGAGAATTTCCCCTCTCTCGTTTCGCCTGTTTGTTGCAGTTTCATCGCTATATTCAGACAAT
TTATTCCCATTTTCGGCTTCCTCGATTTTGCCATTTTGGTGAAAGGTGCAAATTTCTCCATGTTGGTCAGCAACAACAGAAATCAAGTAGCTTTGGCTCTGGGATGCAAA
CTAATTCACAGCAACAAAAACCTAATCCCTTTGGATTTGGAGTTCATAGCACCAGTCAATCTAAAGCAGCTGCTGATATTGGATCCAAACAAAACCAATATAAGTTTGTA
TTTTCTGCGCAATAG

mRNA sequence

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Protein sequence

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MHYEKEPCRNFQRGRCGEFPLSRFACLLQFHRYIQTIYSHFRLPRFCHFGERCKFLHVGQQQQKSSSFGSGMQTNSQQQKPNPFGFGVHSTSQSKAAADIGSKQNQYKFV
FSAQ

Spg021678 (gene) of Sponge gourd (cylindrica) v1 genome