; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg021679 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021679
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold2:17400527..17405003
RNA-Seq ExpressionSpg021679
SyntenySpg021679
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037079.1 suppressor of mec-8 and unc-52 protein-like protein 1 [Cucumis melo var. makuwa]2.0e-1345.83Show/hide
Query:  GFHR---PLSDRETIDILALLSLLEGVSLRPDRRVVHSWSLNPSGGFSCNSFFHFLVDPYLVREFIFSCIWKVKALKKVLFFIWQVILGRVNTFDRLSRV
        GFH     L++RET ++ +LLSLL+G S    RR V +W+ NPS GFS                      +++KALKKV FFIWQV+LG+VNT DRL R 
Subjt:  GFHR---PLSDRETIDILALLSLLEGVSLRPDRRVVHSWSLNPSGGFSCNSFFHFLVDPYLVREFIFSCIWKVKALKKVLFFIWQVILGRVNTFDRLSRV

Query:  QVPVVGPFCRILCRKARKIL
        + P+VGPF  +LCRK  + L
Subjt:  QVPVVGPFCRILCRKARKIL

KAA0054311.1 golgin subfamily A member 6-like protein 22 isoform X2 [Cucumis melo var. makuwa]3.8e-2040.59Show/hide
Query:  LSELGDRFGLCG--PCWCILGDFNVTSSTSFSFGFHRPLSDRETIDILALLSLLEGVSLRPDRRVVHSWSLNPSGGFSCNSFFHFLVDPYLVREFIFSCI
        L  LG    LCG     C++   ++    SFS+GF   L+++E  ++ +LL+LL+G + + +RR V   + NPS GF C S F  L+DP    EF+F  +
Subjt:  LSELGDRFGLCG--PCWCILGDFNVTSSTSFSFGFHRPLSDRETIDILALLSLLEGVSLRPDRRVVHSWSLNPSGGFSCNSFFHFLVDPYLVREFIFSCI

Query:  WKVKALKKVLFFIWQVILGRVNTFDRLSRVQVPVVGPFCRILCRKARKILIICCGVVILLALSGVSSLRS
         + K  KKV FF WQV+LGRV   DRL R +  ++ PFC ILCRK     II  G+ I+    G  S RS
Subjt:  WKVKALKKVLFFIWQVILGRVNTFDRLSRVQVPVVGPFCRILCRKARKILIICCGVVILLALSGVSSLRS

TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]1.2e-1344.72Show/hide
Query:  LGDRFGLCGPCWCI----------LGDFNV--TSSTSFSFGFHRPLSDRETIDILALLSLLEGVSLRPDRRVVHSWSLNPSGGFSCNSFFHFLVDPYLVR
        LG    LCG   C+          + DF V   +S SFSFGF R LSDRET +++AL+SLLE  S R  RR V  WS  P  GF C SFF  LV+     
Subjt:  LGDRFGLCGPCWCI----------LGDFNV--TSSTSFSFGFHRPLSDRETIDILALLSLLEGVSLRPDRRVVHSWSLNPSGGFSCNSFFHFLVDPYLVR

Query:  EFIFSCIWKVKALKKVLFFIWQV
        E + S IW++K  +K + F WQV
Subjt:  EFIFSCIWKVKALKKVLFFIWQV

TYK29954.1 reverse transcriptase [Cucumis melo var. makuwa]1.4e-1452.87Show/hide
Query:  RVVHSWSLNPSGGFSCNSFFHFLVDPYLVREFIFSCIWKVKALKKVLFFIWQVILGRVNTFDRLSRVQVPVVGPFCRILCRKARKIL
        R VH WS NPS GFS  S F  L+DP   REF+F  +W++K  KKV FF WQV+L R N  DRL R   P     C ILCRKA++ L
Subjt:  RVVHSWSLNPSGGFSCNSFFHFLVDPYLVREFIFSCIWKVKALKKVLFFIWQVILGRVNTFDRLSRVQVPVVGPFCRILCRKARKIL

XP_008464727.1 PREDICTED: uncharacterized protein LOC103502543 [Cucumis melo]3.9e-1745.61Show/hide
Query:  RPLSDRETIDILALLSLLEGVSLRPDRRVVHSWSLNPSGGFSCNSFFHFLVDPYLVREFIFSCIWKVKALKKVLFFIWQVILGRVNTFDRLSRVQVPVVG
        R  S +E   + +LLS L+G S R  RR +H W+ NPS GF   S F  L+DP   +E +F  +W     KKV+FFIWQV+L +VN  DRL R +  +VG
Subjt:  RPLSDRETIDILALLSLLEGVSLRPDRRVVHSWSLNPSGGFSCNSFFHFLVDPYLVREFIFSCIWKVKALKKVLFFIWQVILGRVNTFDRLSRVQVPVVG

Query:  PFCRILCRKARKIL
         FC +LC+KA   L
Subjt:  PFCRILCRKARKIL

TrEMBL top hitse value%identityAlignment
A0A1S3CMM8 uncharacterized protein LOC1035025431.9e-1745.61Show/hide
Query:  RPLSDRETIDILALLSLLEGVSLRPDRRVVHSWSLNPSGGFSCNSFFHFLVDPYLVREFIFSCIWKVKALKKVLFFIWQVILGRVNTFDRLSRVQVPVVG
        R  S +E   + +LLS L+G S R  RR +H W+ NPS GF   S F  L+DP   +E +F  +W     KKV+FFIWQV+L +VN  DRL R +  +VG
Subjt:  RPLSDRETIDILALLSLLEGVSLRPDRRVVHSWSLNPSGGFSCNSFFHFLVDPYLVREFIFSCIWKVKALKKVLFFIWQVILGRVNTFDRLSRVQVPVVG

Query:  PFCRILCRKARKIL
         FC +LC+KA   L
Subjt:  PFCRILCRKARKIL

A0A5A7T6T0 Suppressor of mec-8 and unc-52 protein-like protein 19.8e-1445.83Show/hide
Query:  GFHR---PLSDRETIDILALLSLLEGVSLRPDRRVVHSWSLNPSGGFSCNSFFHFLVDPYLVREFIFSCIWKVKALKKVLFFIWQVILGRVNTFDRLSRV
        GFH     L++RET ++ +LLSLL+G S    RR V +W+ NPS GFS                      +++KALKKV FFIWQV+LG+VNT DRL R 
Subjt:  GFHR---PLSDRETIDILALLSLLEGVSLRPDRRVVHSWSLNPSGGFSCNSFFHFLVDPYLVREFIFSCIWKVKALKKVLFFIWQVILGRVNTFDRLSRV

Query:  QVPVVGPFCRILCRKARKIL
        + P+VGPF  +LCRK  + L
Subjt:  QVPVVGPFCRILCRKARKIL

A0A5A7UL95 Golgin subfamily A member 6-like protein 22 isoform X21.8e-2040.59Show/hide
Query:  LSELGDRFGLCG--PCWCILGDFNVTSSTSFSFGFHRPLSDRETIDILALLSLLEGVSLRPDRRVVHSWSLNPSGGFSCNSFFHFLVDPYLVREFIFSCI
        L  LG    LCG     C++   ++    SFS+GF   L+++E  ++ +LL+LL+G + + +RR V   + NPS GF C S F  L+DP    EF+F  +
Subjt:  LSELGDRFGLCG--PCWCILGDFNVTSSTSFSFGFHRPLSDRETIDILALLSLLEGVSLRPDRRVVHSWSLNPSGGFSCNSFFHFLVDPYLVREFIFSCI

Query:  WKVKALKKVLFFIWQVILGRVNTFDRLSRVQVPVVGPFCRILCRKARKILIICCGVVILLALSGVSSLRS
         + K  KKV FF WQV+LGRV   DRL R +  ++ PFC ILCRK     II  G+ I+    G  S RS
Subjt:  WKVKALKKVLFFIWQVILGRVNTFDRLSRVQVPVVGPFCRILCRKARKILIICCGVVILLALSGVSSLRS

A0A5D3CI74 Calpain-type cysteine protease DEK15.7e-1444.72Show/hide
Query:  LGDRFGLCGPCWCI----------LGDFNV--TSSTSFSFGFHRPLSDRETIDILALLSLLEGVSLRPDRRVVHSWSLNPSGGFSCNSFFHFLVDPYLVR
        LG    LCG   C+          + DF V   +S SFSFGF R LSDRET +++AL+SLLE  S R  RR V  WS  P  GF C SFF  LV+     
Subjt:  LGDRFGLCGPCWCI----------LGDFNV--TSSTSFSFGFHRPLSDRETIDILALLSLLEGVSLRPDRRVVHSWSLNPSGGFSCNSFFHFLVDPYLVR

Query:  EFIFSCIWKVKALKKVLFFIWQV
        E + S IW++K  +K + F WQV
Subjt:  EFIFSCIWKVKALKKVLFFIWQV

A0A5D3E255 Reverse transcriptase6.8e-1552.87Show/hide
Query:  RVVHSWSLNPSGGFSCNSFFHFLVDPYLVREFIFSCIWKVKALKKVLFFIWQVILGRVNTFDRLSRVQVPVVGPFCRILCRKARKIL
        R VH WS NPS GFS  S F  L+DP   REF+F  +W++K  KKV FF WQV+L R N  DRL R   P     C ILCRKA++ L
Subjt:  RVVHSWSLNPSGGFSCNSFFHFLVDPYLVREFIFSCIWKVKALKKVLFFIWQVILGRVNTFDRLSRVQVPVVGPFCRILCRKARKIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGGGTTGAATGGGCCTATCAATTTAATCTCAGAAAATACAGTCAAGGACAAAAGAAAATCAGCGTGTAATTTAGTGGAAGAAGGAAATTGGTTTATGTTCGGGCC
TATGCCTTTAAATGGTTACTCGAGGCAAGAAGATGACGTGGAGGAAATGGGGGAAGCAGGAAAGGACTTGGAATGGACGATGAATTTCAACCCGATTGAGGAAGATTTCG
GTTCAGACCCATCTAGTGTTGGTTATTCAGAGGATGAATCTTTCTTAACTACTCCAGCAGCAAAGGAAATGGAAATTCTAAATTTGGGGTCGACGTTCATTTGTGAAGGG
GAACTGTCAGAGCAGAATCATTCGGAGATAAAGGCAGGGCGGGTTTCTTCTCACTCTCCAACAGTGGATGGGGTCTCTTCGGCGACTTCCGAGAGTAAGCAACAGATTGG
TCCATCGTCTGAGGGCCATCTCAATCGATGGTCGAGGTCCTTTCCGGGAATGGGGGAGGGGAATCATATGGGGAATGCTCTTTTTCTTTTTACCTTGTCCTTATTAATCC
TAGTTCGTTTCCTGGAGGAATGGTCTTCCATGTACAGGAGGGATGGTTATAGAGAATTCGGGTTGCTAGCCTCACCCTCCAGAGTATCTAGGGGTTCCTTTCCAGGGGAG
TGTTATAGGGCTTGGGGGAGGGAGAAGAGGAGTATCGTGAAGGAGGTGTTATCCCAAGAGAATCCGGACATTGTGGTTCTTCTTAAGACTAAGAAGCAAAGGTACTGTAG
AAGCTTTGTTAAGAGTGTGTGGGGTTGGGTGACTGGTGTGTATGGCCCCCAGTACTCAAGGGAGAAAGGATTAAGTGAGTTGGGCGACCGTTTTGGTCTTTGCGGGCCTT
GCTGGTGCATTTTGGGGGACTTCAATGTCACGAGCTCCACTTCGTTCTCCTTTGGTTTTCATCGCCCATTATCTGATAGAGAAACCATAGATATCTTGGCCCTCTTATCT
TTGCTAGAGGGGGTTAGCCTTAGACCGGATAGGAGGGTCGTTCACTCTTGGAGTCTCAACCCCTCTGGGGGTTTCTCTTGCAACTCATTCTTTCATTTCTTGGTTGATCC
CTACCTGGTTAGAGAGTTTATCTTTTCGTGCATATGGAAGGTTAAAGCTCTAAAGAAAGTCTTGTTCTTCATTTGGCAGGTCATCTTGGGTCGTGTGAACACTTTTGATA
GGCTTTCGAGAGTGCAGGTCCCTGTGGTTGGCCCTTTTTGTCGCATTCTTTGTCGGAAGGCGAGAAAGATCTTGATCATTTGTTGTGGGGTTGTGATTTTGCTCGCTCTA
TCTGGAGTCTCTTCTTTGAGGTCTTCGAGTTTCAGTTTATTGGGCAATGTTGCTGCAGGGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGGGTTGAATGGGCCTATCAATTTAATCTCAGAAAATACAGTCAAGGACAAAAGAAAATCAGCGTGTAATTTAGTGGAAGAAGGAAATTGGTTTATGTTCGGGCC
TATGCCTTTAAATGGTTACTCGAGGCAAGAAGATGACGTGGAGGAAATGGGGGAAGCAGGAAAGGACTTGGAATGGACGATGAATTTCAACCCGATTGAGGAAGATTTCG
GTTCAGACCCATCTAGTGTTGGTTATTCAGAGGATGAATCTTTCTTAACTACTCCAGCAGCAAAGGAAATGGAAATTCTAAATTTGGGGTCGACGTTCATTTGTGAAGGG
GAACTGTCAGAGCAGAATCATTCGGAGATAAAGGCAGGGCGGGTTTCTTCTCACTCTCCAACAGTGGATGGGGTCTCTTCGGCGACTTCCGAGAGTAAGCAACAGATTGG
TCCATCGTCTGAGGGCCATCTCAATCGATGGTCGAGGTCCTTTCCGGGAATGGGGGAGGGGAATCATATGGGGAATGCTCTTTTTCTTTTTACCTTGTCCTTATTAATCC
TAGTTCGTTTCCTGGAGGAATGGTCTTCCATGTACAGGAGGGATGGTTATAGAGAATTCGGGTTGCTAGCCTCACCCTCCAGAGTATCTAGGGGTTCCTTTCCAGGGGAG
TGTTATAGGGCTTGGGGGAGGGAGAAGAGGAGTATCGTGAAGGAGGTGTTATCCCAAGAGAATCCGGACATTGTGGTTCTTCTTAAGACTAAGAAGCAAAGGTACTGTAG
AAGCTTTGTTAAGAGTGTGTGGGGTTGGGTGACTGGTGTGTATGGCCCCCAGTACTCAAGGGAGAAAGGATTAAGTGAGTTGGGCGACCGTTTTGGTCTTTGCGGGCCTT
GCTGGTGCATTTTGGGGGACTTCAATGTCACGAGCTCCACTTCGTTCTCCTTTGGTTTTCATCGCCCATTATCTGATAGAGAAACCATAGATATCTTGGCCCTCTTATCT
TTGCTAGAGGGGGTTAGCCTTAGACCGGATAGGAGGGTCGTTCACTCTTGGAGTCTCAACCCCTCTGGGGGTTTCTCTTGCAACTCATTCTTTCATTTCTTGGTTGATCC
CTACCTGGTTAGAGAGTTTATCTTTTCGTGCATATGGAAGGTTAAAGCTCTAAAGAAAGTCTTGTTCTTCATTTGGCAGGTCATCTTGGGTCGTGTGAACACTTTTGATA
GGCTTTCGAGAGTGCAGGTCCCTGTGGTTGGCCCTTTTTGTCGCATTCTTTGTCGGAAGGCGAGAAAGATCTTGATCATTTGTTGTGGGGTTGTGATTTTGCTCGCTCTA
TCTGGAGTCTCTTCTTTGAGGTCTTCGAGTTTCAGTTTATTGGGCAATGTTGCTGCAGGGAGATGA
Protein sequenceShow/hide protein sequence
MNGLNGPINLISENTVKDKRKSACNLVEEGNWFMFGPMPLNGYSRQEDDVEEMGEAGKDLEWTMNFNPIEEDFGSDPSSVGYSEDESFLTTPAAKEMEILNLGSTFICEG
ELSEQNHSEIKAGRVSSHSPTVDGVSSATSESKQQIGPSSEGHLNRWSRSFPGMGEGNHMGNALFLFTLSLLILVRFLEEWSSMYRRDGYREFGLLASPSRVSRGSFPGE
CYRAWGREKRSIVKEVLSQENPDIVVLLKTKKQRYCRSFVKSVWGWVTGVYGPQYSREKGLSELGDRFGLCGPCWCILGDFNVTSSTSFSFGFHRPLSDRETIDILALLS
LLEGVSLRPDRRVVHSWSLNPSGGFSCNSFFHFLVDPYLVREFIFSCIWKVKALKKVLFFIWQVILGRVNTFDRLSRVQVPVVGPFCRILCRKARKILIICCGVVILLAL
SGVSSLRSSSFSLLGNVAAGR