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Spg021683 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021683
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionChorein_N domain-containing protein
Genome locationscaffold2:17350341..17350828
RNA-Seq ExpressionSpg021683
SyntenySpg021683
Gene Ontology termsGO:0006623 - protein targeting to vacuole (biological process)
GO:0045053 - protein retention in Golgi apparatus (biological process)
GO:0019898 - extrinsic component of membrane (cellular component)
InterPro domainsIPR026854 - Vacuolar protein sorting-associated protein 13-like, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011660209.1 uncharacterized protein LOC101204937 isoform X1 [Cucumis sativus]4.8e-0891.43Show/hide
Query:  MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSI
        MFEGLV QLLVGYLGRYVKDIQKEKLKITFWN  I
Subjt:  MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSI
XP_022149963.1 uncharacterized protein LOC111018256 isoform X1 [Momordica charantia]9.7e-0991.43Show/hide
Query:  MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSI
        MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWN  +
Subjt:  MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSI
XP_022149964.1 uncharacterized protein LOC111018256 isoform X2 [Momordica charantia]9.7e-0991.43Show/hide
Query:  MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSI
        MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWN  +
Subjt:  MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSI
XP_038879509.1 uncharacterized protein LOC120071354 isoform X1 [Benincasa hispida]4.8e-0891.43Show/hide
Query:  MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSI
        MFEGLV QLLVGYLGRYVKDIQKEKLKITFWN  I
Subjt:  MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSI
XP_038879511.1 uncharacterized protein LOC120071354 isoform X3 [Benincasa hispida]4.8e-0891.43Show/hide
Query:  MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSI
        MFEGLV QLLVGYLGRYVKDIQKEKLKITFWN  I
Subjt:  MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSI
TrEMBL top hitse value%identityAlignment
A0A0A0M0J0 Chorein_N domain-containing protein2.3e-0891.43Show/hide
Query:  MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSI
        MFEGLV QLLVGYLGRYVKDIQKEKLKITFWN  I
Subjt:  MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSI
A0A1S3B8J3 putative vacuolar protein sorting-associated protein 13A isoform X12.3e-0891.43Show/hide
Query:  MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSI
        MFEGLV QLLVGYLGRYVKDIQKEKLKITFWN  I
Subjt:  MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSI
A0A5C7HN35 Uncharacterized protein3.0e-0882.86Show/hide
Query:  MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSI
        MFEGLVRQL++GYLGRYVKDIQKE+LKIT WNG +
Subjt:  MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSI
A0A6J1D861 uncharacterized protein LOC111018256 isoform X14.7e-0991.43Show/hide
Query:  MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSI
        MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWN  +
Subjt:  MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSI
A0A6J1D8L0 uncharacterized protein LOC111018256 isoform X24.7e-0991.43Show/hide
Query:  MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSI
        MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWN  +
Subjt:  MFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G24740.1 Protein of unknown function (DUF1162)2.5e-0760.53Show/hide
Query:  MFEGLVR---QLLVGYLGRYVKDIQKEKLKITFWNGSI
        M EG V+    LL+GYLGRY+KDIQK++LKI+ WNG +
Subjt:  MFEGLVR---QLLVGYLGRYVKDIQKEKLKITFWNGSI
AT5G24740.2 Protein of unknown function (DUF1162)2.5e-0760.53Show/hide
Query:  MFEGLVR---QLLVGYLGRYVKDIQKEKLKITFWNGSI
        M EG V+    LL+GYLGRY+KDIQK++LKI+ WNG +
Subjt:  MFEGLVR---QLLVGYLGRYVKDIQKEKLKITFWNGSI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGAATAGTGTGAGAATGTTCGAAGGACTTGTTCGACAGTTGCTTGTGGGTTATTTGGGCCGATATGTCAAGGATATTCAGAAGGAGAAGCTGAAGATTACCTTTTGGAA
CGGTTCGATTGGTCCTATCAAACAGAGGAAATTCTACATTTCTCTTCGTCAATTGACCTTCCTTCACTTCTAG
mRNA sequenceShow/hide mRNA sequence
GAGAATAGTGTGAGAATGTTCGAAGGACTTGTTCGACAGTTGCTTGTGGGTTATTTGGGCCGATATGTCAAGGATATTCAGAAGGAGAAGCTGAAGATTACCTTTTGGAA
CGGTTCGATTGGTCCTATCAAACAGAGGAAATTCTACATTTCTCTTCGTCAATTGACCTTCCTTCACTTCTAG
Protein sequenceShow/hide protein sequence
ENSVRMFEGLVRQLLVGYLGRYVKDIQKEKLKITFWNGSIGPIKQRKFYISLRQLTFLHF