CuGenDBv2

Gene ID	Spg021723
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	succinate dehydrogenase subunit 6, mitochondrial-like
Genome location	scaffold2:14322681..14326123
RNA-Seq Expression	Spg021723
Synteny	Spg021723
Gene Ontology terms	GO:0005749 - mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) (cellular component)
InterPro domains	IPR034574 - Succinate dehydrogenase subunit 6, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6590149.1 Succinate dehydrogenase subunit 6, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-69

72.83

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Query:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLL
        ME SSSQSFFRKHWEGYKEFWSERFSILDNYSPFV R+KPLPPWSSSDVEEFIA +PVHGPA                                     L
Subjt:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLL

Query:  KTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNEGRF
        KTAREAVNFGLTG+VIGA+STAGV WKYS+SLHGAG+S LAGGVFGWTFGHEIANHWYQLYR+DTMGAQVKFMEWWRNKNEG F
Subjt:  KTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNEGRF

XP_022153276.1 succinate dehydrogenase subunit 6, mitochondrial [Momordica charantia]

4.7e-70

72.83

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Query:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLL
        MEDSSSQSFFRKHWEGYKEFWSERFSILDNY+P+V REKPLP WSSSDVE FIASDPVHGP                                      L
Subjt:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLL

Query:  KTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNEGRF
        KTAREAVNFGLTGSVIGA+STAGV WKYS+SLHGAG+SFLAGGVFGWTFGHE+ANHWYQLYR+DTM AQVKFMEWWRNKNEGRF
Subjt:  KTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNEGRF

XP_022927277.1 succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita moschata]

2.8e-70

73.37

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Query:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLL
        MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFV REKPLP WS SDVEEFIASDPVHGP                                     +L
Subjt:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLL

Query:  KTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNEGRF
        KTAREAVNFGLTGS+IGA+STAGV WKYS+SLHGAG+SFLAGG FGWTFGHEIANHWYQLYR+DTMGAQVKFMEWWRNK+EGRF
Subjt:  KTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNEGRF

XP_022965868.1 succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita maxima]

2.6e-68

72.93

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Query:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLL
        MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFV REKPLP WS SDVEEFIASDPVHGP                                     +L
Subjt:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLL

Query:  KTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNE
        KTAREAVNFGLTGS+IGA+STAGV WKYS+SLHGAG+SFLAGG FGWTFGHEIANHWYQLYR+DTMGAQVKFMEWWRNK+E
Subjt:  KTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNE

XP_022988231.1 succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita maxima]

8.9e-69

71.74

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Query:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLL
        MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFV R+ PLPPWSSSDVEEFIA +PVHGP                                      L
Subjt:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLL

Query:  KTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNEGRF
        KTAREAVNFGLTG+VIGA+STAGV WKYS+SLHGAG+S L GGVFGWTFGHEIANHWYQLYR+DTMGAQVKFMEWWRNKNEG F
Subjt:  KTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNEGRF

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DK58 succinate dehydrogenase subunit 6, mitochondrial

2.3e-70

72.83

Show/hide

Query:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLL
        MEDSSSQSFFRKHWEGYKEFWSERFSILDNY+P+V REKPLP WSSSDVE FIASDPVHGP                                      L
Subjt:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLL

Query:  KTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNEGRF
        KTAREAVNFGLTGSVIGA+STAGV WKYS+SLHGAG+SFLAGGVFGWTFGHE+ANHWYQLYR+DTM AQVKFMEWWRNKNEGRF
Subjt:  KTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNEGRF

A0A6J1EGQ0 succinate dehydrogenase subunit 6, mitochondrial-like

1.3e-70

73.37

Show/hide

Query:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLL
        MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFV REKPLP WS SDVEEFIASDPVHGP                                     +L
Subjt:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLL

Query:  KTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNEGRF
        KTAREAVNFGLTGS+IGA+STAGV WKYS+SLHGAG+SFLAGG FGWTFGHEIANHWYQLYR+DTMGAQVKFMEWWRNK+EGRF
Subjt:  KTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNEGRF

A0A6J1H994 succinate dehydrogenase subunit 6, mitochondrial-like

1.6e-68

71.74

Show/hide

Query:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLL
        ME SSSQSFFRKHWEGYKEFWSERFSILDNYSPFV R+KPLPPWSSSD EEFIA +PVHGPA                                     L
Subjt:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLL

Query:  KTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNEGRF
        KTAREAVNFGLTG+VIGA+STAGV WKYS+SLHGAG+S LAGGVFGWTFGHEIANHWYQLYR+DTMGAQVKFMEWW NKNEG F
Subjt:  KTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNEGRF

A0A6J1HQ77 succinate dehydrogenase subunit 6, mitochondrial-like

1.3e-68

72.93

Show/hide

Query:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLL
        MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFV REKPLP WS SDVEEFIASDPVHGP                                     +L
Subjt:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLL

Query:  KTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNE
        KTAREAVNFGLTGS+IGA+STAGV WKYS+SLHGAG+SFLAGG FGWTFGHEIANHWYQLYR+DTMGAQVKFMEWWRNK+E
Subjt:  KTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNE

A0A6J1JGN4 succinate dehydrogenase subunit 6, mitochondrial-like

4.3e-69

71.74

Show/hide

Query:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLL
        MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFV R+ PLPPWSSSDVEEFIA +PVHGP                                      L
Subjt:  MEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLL

Query:  KTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNEGRF
        KTAREAVNFGLTG+VIGA+STAGV WKYS+SLHGAG+S L GGVFGWTFGHEIANHWYQLYR+DTMGAQVKFMEWWRNKNEG F
Subjt:  KTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNEGRF

SwissProt top hits

e value

%identity

Alignment

Q6ZCC4 Succinate dehydrogenase subunit 6, mitochondrial

2.2e-25

35.67

Show/hide

Query:  KHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLLKTAREAVNFGL
        +H EG K  W++ FS LD +     R+KPLP W+ +DV+EFIASDPV+GP                                      LK  RE+  F L
Subjt:  KHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLLKTAREAVNFGL

Query:  TGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNEG
         G+++G     G+  KYSK+ HG  ++   G + G   G E+A HWYQLY+ D  GA ++F+ WW +K  G
Subjt:  TGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNEG

Q941A6 Succinate dehydrogenase subunit 6, mitochondrial

2.4e-48

53.41

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Query:  SQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLLKTARE
        S+SF  K+W G K+FWS+R S  +NY+ F  R+ PLP WSSSDVEEFIASDPVHGP                                      LKTARE
Subjt:  SQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLLKTARE

Query:  AVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNE
        AV FG+TG+ +GA+STA   WKYS+S HGA +SFL GGVFGWTFG E+ANH  QLY++DTM AQVKFMEWW  K++
Subjt:  AVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNE

Arabidopsis top hits

e value

%identity

Alignment

AT1G08480.1 unknown protein

1.7e-49

53.41

Show/hide

Query:  SQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLLKTARE
        S+SF  K+W G K+FWS+R S  +NY+ F  R+ PLP WSSSDVEEFIASDPVHGP                                      LKTARE
Subjt:  SQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDVEEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLLKTARE

Query:  AVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNE
        AV FG+TG+ +GA+STA   WKYS+S HGA +SFL GGVFGWTFG E+ANH  QLY++DTM AQVKFMEWW  K++
Subjt:  AVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQLYRMDTMGAQVKFMEWWRNKNE

Sequences

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CDS sequence

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AGAAGCCTCACAGAGATACACCAAGCAGCCACAGCCTCCATTTTCCTAACAGACAAACGTGACGAGCTCTCAAGATTCAAGAACGAAATTGCAGAGCTAGAAGAGAACCA
CCATCAAGATTCTGCTTTCAATCGGATTAGTTTCTTAAATCTCAATCATAATCTGTTTTCCGGCGCAACAGTTATGGAAGATTCGTCATCTCAATCCTTCTTCAGGAAGC
ACTGGGAGGGCTACAAGGAATTTTGGTCCGAGAGATTCTCGATCCTCGACAACTACTCCCCCTTCGTCCTGCGCGAGAAGCCCCTTCCTCCCTGGTCTAGCTCCGATGTC
GAGGAGTTCATTGCTTCCGACCCCGTTCATGGCCCCGCTGTAATTCCTCGCTTACTTCCTTTTTCTTTTGCTCCTTTTACTGCCTGCTTTATGGCTTTGAAAATGATTGA
AGGAAATTCTGAGTCAGGCCTTATACTTTTCAATCTTCTATTGAAGACTGCCAGAGAAGCTGTAAACTTTGGTCTTACAGGAAGTGTTATTGGAGCCATATCAACTGCAG
GTGTTGTATGGAAATACTCAAAAAGTTTGCATGGTGCTGGGATGTCGTTCCTAGCGGGAGGCGTATTCGGTTGGACTTTCGGCCATGAGATTGCAAATCATTGGTATCAA
CTCTACAGGATGGACACCATGGGAGCACAAGTTAAGTTTATGGAGTGGTGGAGAAACAAGAATGAGGGACGTTTTTAA

mRNA sequence

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Protein sequence

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RSLTEIHQAATASIFLTDKRDELSRFKNEIAELEENHHQDSAFNRISFLNLNHNLFSGATVMEDSSSQSFFRKHWEGYKEFWSERFSILDNYSPFVLREKPLPPWSSSDV
EEFIASDPVHGPAVIPRLLPFSFAPFTACFMALKMIEGNSESGLILFNLLLKTAREAVNFGLTGSVIGAISTAGVVWKYSKSLHGAGMSFLAGGVFGWTFGHEIANHWYQ
LYRMDTMGAQVKFMEWWRNKNEGRF

Spg021723 (gene) of Sponge gourd (cylindrica) v1 genome