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Spg021724 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021724
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description(DL)-glycerol-3-phosphatase 2
Genome locationscaffold2:2279267..2281052
RNA-Seq ExpressionSpg021724
SyntenySpg021724
Gene Ontology termsGO:0006114 - glycerol biosynthetic process (biological process)
GO:0016311 - dephosphorylation (biological process)
GO:0043136 - glycerol-3-phosphatase activity (molecular function)
InterPro domainsIPR006439 - HAD hydrolase, subfamily IA
IPR023214 - HAD superfamily
IPR036412 - HAD-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058275.1 (DL)-glycerol-3-phosphatase 2 [Cucumis melo var. makuwa]4.2e-2980.95Show/hide
Query:  PSPS-FLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES
        PSP  FL     + DAPVDP+RTLVFEDAP+GVLAAKN+GMKVIMVPDPRLDSS+H +A+QVLSSLLDFNPKEWGLPPFEDSES
Subjt:  PSPS-FLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES

XP_004146318.1 (DL)-glycerol-3-phosphatase 2 [Cucumis sativus]2.1e-2879.76Show/hide
Query:  PSPS-FLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES
        PSP  FL     + DAPVD +RTLVFEDAP+GVLAAKN+GMKVIMVPDPRLDSS+H +A+QVLSSLLDFNPKEWGLPPFEDSES
Subjt:  PSPS-FLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES

XP_008453605.1 PREDICTED: (DL)-glycerol-3-phosphatase 2 [Cucumis melo]4.2e-2980.95Show/hide
Query:  PSPS-FLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES
        PSP  FL     + DAPVDP+RTLVFEDAP+GVLAAKN+GMKVIMVPDPRLDSS+H +A+QVLSSLLDFNPKEWGLPPFEDSES
Subjt:  PSPS-FLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES

XP_022135581.1 (DL)-glycerol-3-phosphatase 2 [Momordica charantia]6.1e-2878.57Show/hide
Query:  PSPS-FLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES
        PSP  FL     + DAPVDP RTLVFEDAP+GVLAAK++GM+VIMVPDPRLD SY  DADQVLSSLLDFNP+EWGLPPFEDSES
Subjt:  PSPS-FLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES

XP_038878592.1 (DL)-glycerol-3-phosphatase 2 [Benincasa hispida]1.8e-2777.38Show/hide
Query:  PSPS-FLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES
        PSP  FL     + DAPV P++ LVFEDAP+GVLAAKN+GMKV+MVPDPRLDSSYH +A+QVLSSLLDFNPKEWGLPPFEDSES
Subjt:  PSPS-FLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES

TrEMBL top hitse value%identityAlignment
A0A0A0LZT1 Uncharacterized protein1.0e-2879.76Show/hide
Query:  PSPS-FLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES
        PSP  FL     + DAPVD +RTLVFEDAP+GVLAAKN+GMKVIMVPDPRLDSS+H +A+QVLSSLLDFNPKEWGLPPFEDSES
Subjt:  PSPS-FLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES

A0A1S3BXU4 (DL)-glycerol-3-phosphatase 22.0e-2980.95Show/hide
Query:  PSPS-FLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES
        PSP  FL     + DAPVDP+RTLVFEDAP+GVLAAKN+GMKVIMVPDPRLDSS+H +A+QVLSSLLDFNPKEWGLPPFEDSES
Subjt:  PSPS-FLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES

A0A5D3CIR5 (DL)-glycerol-3-phosphatase 22.0e-2980.95Show/hide
Query:  PSPS-FLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES
        PSP  FL     + DAPVDP+RTLVFEDAP+GVLAAKN+GMKVIMVPDPRLDSS+H +A+QVLSSLLDFNPKEWGLPPFEDSES
Subjt:  PSPS-FLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES

A0A6J1C159 (DL)-glycerol-3-phosphatase 22.9e-2878.57Show/hide
Query:  PSPS-FLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES
        PSP  FL     + DAPVDP RTLVFEDAP+GVLAAK++GM+VIMVPDPRLD SY  DADQVLSSLLDFNP+EWGLPPFEDSES
Subjt:  PSPS-FLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES

A0A6J1KX79 (DL)-glycerol-3-phosphatase 2 isoform X21.5e-2778.57Show/hide
Query:  PSPS-FLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES
        PSP  FL     + + PVDPQR LVFEDAP+GVLAAKN+GM VIMVPDPRLDSSY  DADQVLSSL+DFNPKEWGLPPFEDSES
Subjt:  PSPS-FLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES

SwissProt top hitse value%identityAlignment
F4JTE7 (DL)-glycerol-3-phosphatase 1, mitochondrial5.5e-2465.48Show/hide
Query:  PSP-SFLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES
        P+P  FL     + D PVDP++ LVFEDAP+GV AAKN+GM VIMVPD RLD SY N ADQVL+SLLDF P+EWGLP F+DS +
Subjt:  PSP-SFLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES

Q08623 Pseudouridine-5'-phosphatase1.3e-0941.46Show/hide
Query:  YANPSPSFLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFE
        +  P P   +        P   ++ LVFEDAP GV AA  +GM+V+MVPD  L       A  VL+SL DF P+ +GLP +E
Subjt:  YANPSPSFLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFE

Q84MD8 Bifunctional riboflavin kinase/FMN phosphatase1.0e-0939.33Show/hide
Query:  IISSHSYANPSPSFLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFED
        I+ S   +   PS  I          DP   LV ED+  GV+A K +G KVI VP     +  +  AD+V++SLLD   ++WGLPPF+D
Subjt:  IISSHSYANPSPSFLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFED

Q8VZP1 (DL)-glycerol-3-phosphatase 21.5e-2464.63Show/hide
Query:  PSP-SFLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDS
        P+P  FL     + D PVD Q+ LVFEDAP+GVLAAKN+GM V+MVPDPRLD S+ + ADQ+++SL+DF P+EWGLPPFEDS
Subjt:  PSP-SFLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDS

Q94529 Probable pseudouridine-5'-phosphatase2.3e-1447.5Show/hide
Query:  PSPSFLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFED
        P+P   ++       P  P   LVFED+P GV AA ++GM+V+MVPDPRL     + A QVL+SL DF P+++GLP F D
Subjt:  PSPSFLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFED

Arabidopsis top hitse value%identityAlignment
AT4G21470.1 riboflavin kinase/FMN hydrolase7.2e-1139.33Show/hide
Query:  IISSHSYANPSPSFLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFED
        I+ S   +   PS  I          DP   LV ED+  GV+A K +G KVI VP     +  +  AD+V++SLLD   ++WGLPPF+D
Subjt:  IISSHSYANPSPSFLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFED

AT4G25840.1 glycerol-3-phosphatase 13.9e-2565.48Show/hide
Query:  PSP-SFLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES
        P+P  FL     + D PVDP++ LVFEDAP+GV AAKN+GM VIMVPD RLD SY N ADQVL+SLLDF P+EWGLP F+DS +
Subjt:  PSP-SFLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDSES

AT5G57440.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein1.0e-2564.63Show/hide
Query:  PSP-SFLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDS
        P+P  FL     + D PVD Q+ LVFEDAP+GVLAAKN+GM V+MVPDPRLD S+ + ADQ+++SL+DF P+EWGLPPFEDS
Subjt:  PSP-SFLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFEDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
atggaaagcgcatggatacaagttatgccttggaatgaaaagacaatcgaattagcttgtctacggatcataagcagccattcttatgcaaatcctagtccttctttttt
gataatttaccattattatctggatgcacccgtggatccacaaagaacccttgtttttgaagatgcaccagcaggtgttcttgcagctaaaaattcgggaatGAAGGTTA
TTATGGTTCCAGATCCAAGGTTGGATAGTTCTTATCACAATGATGCAGACCAGGTATTGAGTTCCCTCTTGGATTTCAACCCCAAGGAATGGGGTCTGCCTCCTTTTGAA
GATTCAGAAAGCTAA
mRNA sequenceShow/hide mRNA sequence
atggaaagcgcatggatacaagttatgccttggaatgaaaagacaatcgaattagcttgtctacggatcataagcagccattcttatgcaaatcctagtccttctttttt
gataatttaccattattatctggatgcacccgtggatccacaaagaacccttgtttttgaagatgcaccagcaggtgttcttgcagctaaaaattcgggaatGAAGGTTA
TTATGGTTCCAGATCCAAGGTTGGATAGTTCTTATCACAATGATGCAGACCAGGTATTGAGTTCCCTCTTGGATTTCAACCCCAAGGAATGGGGTCTGCCTCCTTTTGAA
GATTCAGAAAGCTAA
Protein sequenceShow/hide protein sequence
MESAWIQVMPWNEKTIELACLRIISSHSYANPSPSFLIIYHYYLDAPVDPQRTLVFEDAPAGVLAAKNSGMKVIMVPDPRLDSSYHNDADQVLSSLLDFNPKEWGLPPFE
DSES