; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg021753 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021753
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold2:12712758..12713510
RNA-Seq ExpressionSpg021753
SyntenySpg021753
Gene Ontology termsNA
InterPro domainsIPR028919 - Viral movement protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590198.1 hypothetical protein SDJN03_15621, partial [Cucurbita argyrosperma subsp. sororia]4.1e-5347.6Show/hide
Query:  MSQLFTKCCSSKSGNHALDSQEYMKKGNNLLNWKMPKIPTTTLYKRSNKFSFFL----SDPSIKISEARASFGNGNRAIRLINPIMNAFESK-RFYDMFN
        MS  F  C S    +H+L+ +EY++KGNNL+ W MP +P   LY+   K   F      D SI+I+E + SFGNG  + +L     +++  K +FY + N
Subjt:  MSQLFTKCCSSKSGNHALDSQEYMKKGNNLLNWKMPKIPTTTLYKRSNKFSFFL----SDPSIKISEARASFGNGNRAIRLINPIMNAFESK-RFYDMFN

Query:  VGLVQIGVKTLTKKIPQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFD-NESFGALVLNVIVKGFEQLLVGAEPISLMVRTVCK
        +GLVQIGVKT+T+KIP NASI L VRD R +K+E SI+ +V++ LGDGP YFNVFPNM   LF+ +     L ++V+VKGF+QL  G+EPI +  RT  K
Subjt:  VGLVQIGVKTLTKKIPQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFD-NESFGALVLNVIVKGFEQLLVGAEPISLMVRTVCK

Query:  L-QSDEAPSALLESPDGKTVFFQTDV--------EGSNETVQRVTAWDKV
        L Q+   P ALLESP GKTVFFQT +         G  + VQ+VT WD+V
Subjt:  L-QSDEAPSALLESPDGKTVFFQTDV--------EGSNETVQRVTAWDKV

KGN66493.1 hypothetical protein Csa_007053 [Cucumis sativus]5.0e-5145.9Show/hide
Query:  LFTKCCSSKS--GNHALDSQEYMKKGNNLLNWKMPKIPTTTLYKRSNKFSFFL----SDPSIKISEARASFGNGNRAIRLINPIMNAFESKR---FYDMF
        LF K CSSK+  G+H+L+ +EY++KG +L+ WKMP++P   +Y+   K  FF+    +DPSI+ +E + SFGN   + +L     +++  +R   F++  
Subjt:  LFTKCCSSKS--GNHALDSQEYMKKGNNLLNWKMPKIPTTTLYKRSNKFSFFL----SDPSIKISEARASFGNGNRAIRLINPIMNAFESKR---FYDMF

Query:  NVGLVQIGVKTLTKKIPQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFDNESFGALVLNVIVKGFEQLLVGAEPISLMVRTVCK
        N+GLVQIGVKTLTKKIP NASI L +RD R +K+E S+L LV++ LGDGP YFNVFPN+ + LF +     L ++V+VKG +++  G+ PI +  RT  K
Subjt:  NVGLVQIGVKTLTKKIPQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFDNESFGALVLNVIVKGFEQLLVGAEPISLMVRTVCK

Query:  L-QSDEAPSALLESPDGKTVFFQTDV--EGSNETVQRVTAWDKV
        L Q+D    AL+ESP GKTVFFQ ++  +  ++ VQ+VT W++V
Subjt:  L-QSDEAPSALLESPDGKTVFFQTDV--EGSNETVQRVTAWDKV

KGN66494.1 hypothetical protein Csa_006902 [Cucumis sativus]1.5e-6355.88Show/hide
Query:  TKCCSSK--SGNHALDSQEYMKKGNNLLNWKMPKIPTTTLYKRSNKFSFFLSDPSIKISEARASFGNGNRAIRLI--NPIMNAFESKRFYDMFNVGLVQI
        T C SS    G+H+LDS+EY+KKG NLL WK+PKIPTT +YK SN F FF SDP IK  E      NG++  RLI  NP+++ F+ KRFY   N+G++QI
Subjt:  TKCCSSK--SGNHALDSQEYMKKGNNLLNWKMPKIPTTTLYKRSNKFSFFLSDPSIKISEARASFGNGNRAIRLI--NPIMNAFESKRFYDMFNVGLVQI

Query:  GVKTLTKKIPQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFDNESFGALVLNVIVKGFEQLLVGAEPISLMVRTVCKLQSDEAP
        GVKTLT KIP NASI L V D R+D  E SILGLV++ L DGP++FN+FPN+TMP+F  +   + VL  +V+GFEQL  G  PISLM RT  KLQ+   P
Subjt:  GVKTLTKKIPQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFDNESFGALVLNVIVKGFEQLLVGAEPISLMVRTVCKLQSDEAP

Query:  SALLESPDGKTVFFQTDVEGSNETVQRVTAWDKVVCNL
        +AL+ESP GKTVFFQT+ E S    Q+V+ WD+V+C +
Subjt:  SALLESPDGKTVFFQTDVEGSNETVQRVTAWDKVVCNL

TYK18873.1 polyprotein [Cucumis melo var. makuwa]3.4e-4760Show/hide
Query:  NGNRAIRLI--NPIMNAFESKRFYDMFNVGLVQIGVKTLTKKIPQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFDNESFGALV
        NG++A RLI  NPI+ +F+ KRF  M N+G++QIGVKTLT KIP NASI L V D R+D  E SILGLV+A L DGP++FN+FPN+TM LF  +   +LV
Subjt:  NGNRAIRLI--NPIMNAFESKRFYDMFNVGLVQIGVKTLTKKIPQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFDNESFGALV

Query:  LNVIVKGFEQLLVGAEPISLMVRTVCKLQSDEAPSALLESPDGKTVFFQTDVEGSNETVQRVTAWDKVVC
        L  +V+GFEQL  G  PISLM RT  KLQ    P+AL+ESP GKTVFFQTD E S   VQ+V+ WD+VVC
Subjt:  LNVIVKGFEQLLVGAEPISLMVRTVCKLQSDEAPSALLESPDGKTVFFQTDVEGSNETVQRVTAWDKVVC

XP_038880673.1 uncharacterized protein LOC120072292 [Benincasa hispida]2.6e-5552.26Show/hide
Query:  MSQLFTKCCSSK--SGNHALDSQEYMKKGNNLLNWKMPKIPTTTLYKRSNKFSFFLSDPSIKISEARASFGNGNRAIRLI--NPIMNAFESKRFYDMFNV
        M+ LF  CCSS    G+HALDS+EY+KKGNNLL WK+PK+PTT +YKR N F+FF SDPSIK  E + S  NG++A RLI  NPIM +F   RFY   NV
Subjt:  MSQLFTKCCSSK--SGNHALDSQEYMKKGNNLLNWKMPKIPTTTLYKRSNKFSFFLSDPSIKISEARASFGNGNRAIRLI--NPIMNAFESKRFYDMFNV

Query:  GLVQIGVKTLTKKIPQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFDNESFGALVLNVIVKGFEQLLVGAEPISLMVRTVCKLQ
        G++QIGVK +T KIP NASI L V D+R++  E +ILGLV++NL                                 GFEQL  G  PISLM RT  KLQ
Subjt:  GLVQIGVKTLTKKIPQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFDNESFGALVLNVIVKGFEQLLVGAEPISLMVRTVCKLQ

Query:  SDEAPSALLESPDGKTVFFQTDVEGSNETVQRVTAWDKVVCNL
            P+ALLESP GKTV+FQTD++ S   VQ+V+ WD+VVC L
Subjt:  SDEAPSALLESPDGKTVFFQTDVEGSNETVQRVTAWDKVVCNL

TrEMBL top hitse value%identityAlignment
A0A0A0LXM3 Uncharacterized protein2.4e-5145.9Show/hide
Query:  LFTKCCSSKS--GNHALDSQEYMKKGNNLLNWKMPKIPTTTLYKRSNKFSFFL----SDPSIKISEARASFGNGNRAIRLINPIMNAFESKR---FYDMF
        LF K CSSK+  G+H+L+ +EY++KG +L+ WKMP++P   +Y+   K  FF+    +DPSI+ +E + SFGN   + +L     +++  +R   F++  
Subjt:  LFTKCCSSKS--GNHALDSQEYMKKGNNLLNWKMPKIPTTTLYKRSNKFSFFL----SDPSIKISEARASFGNGNRAIRLINPIMNAFESKR---FYDMF

Query:  NVGLVQIGVKTLTKKIPQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFDNESFGALVLNVIVKGFEQLLVGAEPISLMVRTVCK
        N+GLVQIGVKTLTKKIP NASI L +RD R +K+E S+L LV++ LGDGP YFNVFPN+ + LF +     L ++V+VKG +++  G+ PI +  RT  K
Subjt:  NVGLVQIGVKTLTKKIPQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFDNESFGALVLNVIVKGFEQLLVGAEPISLMVRTVCK

Query:  L-QSDEAPSALLESPDGKTVFFQTDV--EGSNETVQRVTAWDKV
        L Q+D    AL+ESP GKTVFFQ ++  +  ++ VQ+VT W++V
Subjt:  L-QSDEAPSALLESPDGKTVFFQTDV--EGSNETVQRVTAWDKV

A0A0A0LZS0 Uncharacterized protein7.3e-6455.88Show/hide
Query:  TKCCSSK--SGNHALDSQEYMKKGNNLLNWKMPKIPTTTLYKRSNKFSFFLSDPSIKISEARASFGNGNRAIRLI--NPIMNAFESKRFYDMFNVGLVQI
        T C SS    G+H+LDS+EY+KKG NLL WK+PKIPTT +YK SN F FF SDP IK  E      NG++  RLI  NP+++ F+ KRFY   N+G++QI
Subjt:  TKCCSSK--SGNHALDSQEYMKKGNNLLNWKMPKIPTTTLYKRSNKFSFFLSDPSIKISEARASFGNGNRAIRLI--NPIMNAFESKRFYDMFNVGLVQI

Query:  GVKTLTKKIPQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFDNESFGALVLNVIVKGFEQLLVGAEPISLMVRTVCKLQSDEAP
        GVKTLT KIP NASI L V D R+D  E SILGLV++ L DGP++FN+FPN+TMP+F  +   + VL  +V+GFEQL  G  PISLM RT  KLQ+   P
Subjt:  GVKTLTKKIPQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFDNESFGALVLNVIVKGFEQLLVGAEPISLMVRTVCKLQSDEAP

Query:  SALLESPDGKTVFFQTDVEGSNETVQRVTAWDKVVCNL
        +AL+ESP GKTVFFQT+ E S    Q+V+ WD+V+C +
Subjt:  SALLESPDGKTVFFQTDVEGSNETVQRVTAWDKVVCNL

A0A438I6T6 CCHC-type domain-containing protein1.3e-2333.04Show/hide
Query:  SSKSGNHALDSQE--YMKKGNNLLNWKMPKIPTTTLYKRSNKFSFFLSDPSIKISEARASFGNGNRAIRLINPIMNAFESKRFYDMFNVGLVQIGVKTLT
        SS S +  ++S+E  Y K  N+L +WK+PK+    +YK+   F FF +D +IK SE   S    ++ IRL++        K  Y+  + G++Q+  K LT
Subjt:  SSKSGNHALDSQE--YMKKGNNLLNWKMPKIPTTTLYKRSNKFSFFLSDPSIKISEARASFGNGNRAIRLINPIMNAFESKRFYDMFNVGLVQIGVKTLT

Query:  KKIPQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFDNESFGALVLNVIVKGFEQLLVGAEPISLMVRTVCK-LQSDEAPSALLE
         ++  N +I + +RD RH +   SI+G V+A L DGP+YF  +PN T+ L D +   ++VL++   GF ++  G  P+S++ R   K + +     AL  
Subjt:  KKIPQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFDNESFGALVLNVIVKGFEQLLVGAEPISLMVRTVCK-LQSDEAPSALLE

Query:  SPDGKTVFFQTD-VEGSNETVQRVTAWDKV
        SP G+T +F +D ++ S+  + +   W  V
Subjt:  SPDGKTVFFQTD-VEGSNETVQRVTAWDKV

A0A5A7U9X3 Polyprotein1.4e-4659.41Show/hide
Query:  NGNRAIRLI--NPIMNAFESKRFYDMFNVGLVQIGVKTLTKKIPQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFDNESFGALV
        NG++A RLI  NPI+ +F+ KRF  M N+G++QIGVKTLT KI  NASI L V D R+D  E SILGLV+A L DGP++FN+FPN+TM LF  +   +LV
Subjt:  NGNRAIRLI--NPIMNAFESKRFYDMFNVGLVQIGVKTLTKKIPQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFDNESFGALV

Query:  LNVIVKGFEQLLVGAEPISLMVRTVCKLQSDEAPSALLESPDGKTVFFQTDVEGSNETVQRVTAWDKVVC
        L  +V+GFEQL  G  PISLM RT  KLQ    P+AL+ESP GKTVFFQTD E S   VQ+V+ WD+VVC
Subjt:  LNVIVKGFEQLLVGAEPISLMVRTVCKLQSDEAPSALLESPDGKTVFFQTDVEGSNETVQRVTAWDKVVC

A0A5D3D5V1 Polyprotein1.6e-4760Show/hide
Query:  NGNRAIRLI--NPIMNAFESKRFYDMFNVGLVQIGVKTLTKKIPQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFDNESFGALV
        NG++A RLI  NPI+ +F+ KRF  M N+G++QIGVKTLT KIP NASI L V D R+D  E SILGLV+A L DGP++FN+FPN+TM LF  +   +LV
Subjt:  NGNRAIRLI--NPIMNAFESKRFYDMFNVGLVQIGVKTLTKKIPQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFDNESFGALV

Query:  LNVIVKGFEQLLVGAEPISLMVRTVCKLQSDEAPSALLESPDGKTVFFQTDVEGSNETVQRVTAWDKVVC
        L  +V+GFEQL  G  PISLM RT  KLQ    P+AL+ESP GKTVFFQTD E S   VQ+V+ WD+VVC
Subjt:  LNVIVKGFEQLLVGAEPISLMVRTVCKLQSDEAPSALLESPDGKTVFFQTDVEGSNETVQRVTAWDKVVC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACAACTTTTCACCAAATGTTGCAGTTCAAAATCCGGAAACCATGCTTTAGACAGCCAAGAATACATGAAGAAAGGGAACAATCTTTTGAATTGGAAGATGCCAAA
AATTCCCACAACAACACTCTACAAAAGAAGCAACAAATTCAGCTTTTTCCTCTCCGATCCCTCCATCAAAATAAGCGAAGCAAGAGCTTCATTTGGCAATGGCAACAGAG
CCATACGACTCATCAACCCCATAATGAATGCATTCGAAAGCAAAAGATTTTACGACATGTTCAACGTGGGGCTGGTTCAAATTGGAGTCAAAACCTTAACCAAAAAAATC
CCACAAAACGCCTCCATAACTCTCATCGTTCGCGATGCGAGACACGACAAGATCGAGGGTTCGATTCTGGGATTGGTGAAAGCAAATCTAGGAGATGGGCCTCTGTATTT
CAATGTTTTTCCAAACATGACAATGCCTTTGTTCGATAATGAGTCGTTTGGTGCGTTGGTTTTGAATGTGATTGTCAAGGGTTTTGAGCAGCTTCTTGTTGGGGCTGAGC
CCATCAGTTTGATGGTTAGAACTGTTTGCAAATTGCAAAGTGATGAAGCGCCTAGTGCCTTGTTGGAGAGCCCAGATGGGAAGACTGTGTTCTTTCAGACGGATGTTGAA
GGTTCCAATGAAACCGTTCAAAGGGTTACTGCTTGGGATAAAGTTGTTTGCAACCTTGTGCTCTCTGGTGAGGATAAGAAAGCTCAGAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACAACTTTTCACCAAATGTTGCAGTTCAAAATCCGGAAACCATGCTTTAGACAGCCAAGAATACATGAAGAAAGGGAACAATCTTTTGAATTGGAAGATGCCAAA
AATTCCCACAACAACACTCTACAAAAGAAGCAACAAATTCAGCTTTTTCCTCTCCGATCCCTCCATCAAAATAAGCGAAGCAAGAGCTTCATTTGGCAATGGCAACAGAG
CCATACGACTCATCAACCCCATAATGAATGCATTCGAAAGCAAAAGATTTTACGACATGTTCAACGTGGGGCTGGTTCAAATTGGAGTCAAAACCTTAACCAAAAAAATC
CCACAAAACGCCTCCATAACTCTCATCGTTCGCGATGCGAGACACGACAAGATCGAGGGTTCGATTCTGGGATTGGTGAAAGCAAATCTAGGAGATGGGCCTCTGTATTT
CAATGTTTTTCCAAACATGACAATGCCTTTGTTCGATAATGAGTCGTTTGGTGCGTTGGTTTTGAATGTGATTGTCAAGGGTTTTGAGCAGCTTCTTGTTGGGGCTGAGC
CCATCAGTTTGATGGTTAGAACTGTTTGCAAATTGCAAAGTGATGAAGCGCCTAGTGCCTTGTTGGAGAGCCCAGATGGGAAGACTGTGTTCTTTCAGACGGATGTTGAA
GGTTCCAATGAAACCGTTCAAAGGGTTACTGCTTGGGATAAAGTTGTTTGCAACCTTGTGCTCTCTGGTGAGGATAAGAAAGCTCAGAGCTGA
Protein sequenceShow/hide protein sequence
MSQLFTKCCSSKSGNHALDSQEYMKKGNNLLNWKMPKIPTTTLYKRSNKFSFFLSDPSIKISEARASFGNGNRAIRLINPIMNAFESKRFYDMFNVGLVQIGVKTLTKKI
PQNASITLIVRDARHDKIEGSILGLVKANLGDGPLYFNVFPNMTMPLFDNESFGALVLNVIVKGFEQLLVGAEPISLMVRTVCKLQSDEAPSALLESPDGKTVFFQTDVE
GSNETVQRVTAWDKVVCNLVLSGEDKKAQS