; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg021784 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021784
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationscaffold2:14643955..14647485
RNA-Seq ExpressionSpg021784
SyntenySpg021784
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041857.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.8e-3931.35Show/hide
Query:  IWNQMAEPNQGGMIIQENPL----FGYSTSSSEQAKEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAA
        IW Q+++P +GG++I+ENP     + +S  SSE   E+  P++MSVM+ ++ T E RMAELE+KVNMLMK VEERD EIA LKNHIESRD AESS     
Subjt:  IWNQMAEPNQGGMIIQENPL----FGYSTSSSEQAKEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAA

Query:  KNNDKGKAVIQENQPQHSTSIASLPVQQLQDMIMSSIRAQYG----------------------------------------------------------
        KN DKGKAV+QE+QPQ+STSI SL VQQLQ+MI +SI+ QYG                                                          
Subjt:  KNNDKGKAVIQENQPQHSTSIASLPVQQLQDMIMSSIRAQYG----------------------------------------------------------

Query:  -----------------------------------------------------------------------------------------SLIQFGTFEPI
                                                                                                 SLIQFGT  PI
Subjt:  -----------------------------------------------------------------------------------------SLIQFGTFEPI

Query:  IVWSQPEAPGNDFLYEDDIQEKIRQIEDEDGGWTLVTRRKNRKQNWVQKESHLFREHKRKSRPRRKNGK--KYMRRLKPILEESEKKLQKEGYAIPISRA
        +V  Q        +   + Q K    +D+  GW  VTR+K R+ N +QKES   +++ + S   +K G+  K M   KPI  + E  LQ           
Subjt:  IVWSQPEAPGNDFLYEDDIQEKIRQIEDEDGGWTLVTRRKNRKQNWVQKESHLFREHKRKSRPRRKNGK--KYMRRLKPILEESEKKLQKEGYAIPISRA

Query:  GLGYKSPEPVRITRKGKAKVADTLHITVEEIDDSEQAKEDEIDHRTSALDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSVFQRLSMASEEKGSV
           +    P  I        A  + +        E    +EI+ RTS  DRI PS TR+SVFQRLS    E+E+Q PT+  TR S   + S    +K  +
Subjt:  GLGYKSPEPVRITRKGKAKVADTLHITVEEIDDSEQAKEDEIDHRTSALDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSVFQRLSMASEEKGSV

Query:  HSTP
           P
Subjt:  HSTP

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]2.2e-3762.24Show/hide
Query:  IWNQMAEPNQGGMIIQENPLFGYSTSSSEQA-KEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAAKNN
        IW Q+++P +GG++I+ENP      S SE++ +E+  P++MSVM+ D+ T E+RMAELE+KVNMLMKAVEERD EIA LKNHIESRD AESS T   KN 
Subjt:  IWNQMAEPNQGGMIIQENPLFGYSTSSSEQA-KEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAAKNN

Query:  DKGKAVIQENQPQHSTSIASLPVQQLQDMIMSSIRAQYGSLIQ
        +KGKA++QE+QPQ+STSIASL VQQLQ+MI +SI+ QYG   Q
Subjt:  DKGKAVIQENQPQHSTSIASLPVQQLQDMIMSSIRAQYGSLIQ

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]9.0e-3152.5Show/hide
Query:  KPILEESEKKLQKEGYAIPISRAGLGYKSPEPVRITRKGKAKVADTLHITVEEIDDSEQAKEDEIDHRTSALDRIGPSVTRSSVFQRLSTAAIEDESQHP
        +P L  ++KKLQK+GY+IP SRAG+GY+S EPVRIT KGKAKVA+T HITVEE  DSE+ K+     R+S  DRI  S  R SVFQR+ST+  +D +Q  
Subjt:  KPILEESEKKLQKEGYAIPISRAGLGYKSPEPVRITRKGKAKVADTLHITVEEIDDSEQAKEDEIDHRTSALDRIGPSVTRSSVFQRLSTAAIEDESQHP

Query:  TYGSTRPSVFQRLSMASEEKGSVHSTPTTRLSAFQRLSVVTKRSEEQSPILASNITETAT
        T  STR S FQRL+ ++++  S+  TPTTR SAF+RLSV   R ++++ +  SN +   T
Subjt:  TYGSTRPSVFQRLSMASEEKGSVHSTPTTRLSAFQRLSVVTKRSEEQSPILASNITETAT

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]4.9e-1346.32Show/hide
Query:  GSLIQFGTFEPIIVWSQPEAPGNDFLYEDDIQEKIRQIEDEDGGWTLVTRRKNRKQNWVQKESHLFREHKRKSRPRRKNGKKYMRRLKPILEESE
        GSLIQFG+ EP++++S PE   N+    D  +E+ +Q+++ + GWTLVTRRK RKQ++ QKES  +R ++ K + +R+N +K  R+  PI+EESE
Subjt:  GSLIQFGTFEPIIVWSQPEAPGNDFLYEDDIQEKIRQIEDEDGGWTLVTRRKNRKQNWVQKESHLFREHKRKSRPRRKNGKKYMRRLKPILEESE

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]4.9e-3761.54Show/hide
Query:  IWNQMAEPNQGGMIIQENPLFGYSTSSSEQA-KEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAAKNN
        IW Q+++P +GG++I+ENP      S SE++ +E+  P++MSVM+ D+ T E+RMAELE+KVNMLMKAVEE+D EIA LKNHIESRD AESS T   KN 
Subjt:  IWNQMAEPNQGGMIIQENPLFGYSTSSSEQA-KEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAAKNN

Query:  DKGKAVIQENQPQHSTSIASLPVQQLQDMIMSSIRAQYGSLIQ
        +KGKA++QE+QPQ+STSIASL VQQLQ+MI +SI+ QYG   Q
Subjt:  DKGKAVIQENQPQHSTSIASLPVQQLQDMIMSSIRAQYGSLIQ

KAA0061331.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.4e-3937.8Show/hide
Query:  EPNQGGMIIQENPLFGYSTSSSEQAKEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAAKNNDKGKAVI
        E  + G++++ENPL+  S S+S ++K+ + PDVM  MMA+I T E  MAE+ERKVN LMK VEERD EI +L+  +++R+ AESSQTP  K  DKGK  +
Subjt:  EPNQGGMIIQENPLFGYSTSSSEQAKEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAAKNNDKGKAVI

Query:  QENQP-QHSTSIASLPVQQLQDMIMSSIRAQYGSLIQFGTFEPIIVWSQPEAPGNDFLYEDDIQEKIRQIEDEDGGWTLVTRRKNRKQNWVQKESHLFRE
        Q+NQP Q S S+ASL VQQL DMI +SIRAQYG   Q                   F+Y     ++I  +    G    +  R   +   ++ +S  FR 
Subjt:  QENQP-QHSTSIASLPVQQLQDMIMSSIRAQYGSLIQFGTFEPIIVWSQPEAPGNDFLYEDDIQEKIRQIEDEDGGWTLVTRRKNRKQNWVQKESHLFRE

Query:  HKRKSRPRRKNGKKYMRRLKPILEESEKKLQKEGYAIPIS-----RAGLGYKSPEPVRITRKGKAKV--ADTLHITVEEIDDSEQAKEDEIDHRTSALDR
        +   ++ +   G+   R  KP +E S+  LQ++ +    S     R+ L     E + +T    A +   D  + + EE+D+S     +EI  +TS  DR
Subjt:  HKRKSRPRRKNGKKYMRRLKPILEESEKKLQKEGYAIPIS-----RAGLGYKSPEPVRITRKGKAKV--ADTLHITVEEIDDSEQAKEDEIDHRTSALDR

Query:  IGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSVFQRLSMASEEKGSVHSTPTTRLSAFQRLSVVTKRSEEQ
        I P  TRSS+FQRLS A  ++E+Q PT   TR S F+RLS++  +K      P T  SAF RL +   + + +
Subjt:  IGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSVFQRLSMASEEKGSVHSTPTTRLSAFQRLSVVTKRSEEQ

TYK09793.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.5e-4331.86Show/hide
Query:  IWNQMAEPNQGGMIIQENPLFGYSTSSSE-QAKEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAAKNN
        IW Q+++P +GG++I+ENP      SSS+  ++E+  P++MSVM+ ++ T E RM ELE+KVNMLMK VEERD EIA LKNHIES D AESS     KN 
Subjt:  IWNQMAEPNQGGMIIQENPLFGYSTSSSE-QAKEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAAKNN

Query:  DKGKAVIQENQPQHSTSIASLPVQQLQDMIMSSIRAQYG-------------------------------------------------------------
        DKGKAV+QE+Q Q+STSI SL VQQLQ+MI +SI+ QYG                                                             
Subjt:  DKGKAVIQENQPQHSTSIASLPVQQLQDMIMSSIRAQYG-------------------------------------------------------------

Query:  --------------------------------------------------------------------------------------SLIQFGTFEPIIVW
                                                                                              SLIQFGTF PI+V 
Subjt:  --------------------------------------------------------------------------------------SLIQFGTFEPIIVW

Query:  SQPEAPGNDFLYEDDIQEKIRQIEDEDGGWTLVTRRKNRKQNWVQKESHLFREHKRKSRPRRKNG--KKYMRRLKPILEESEKKLQKEGYAIPISRAGLG
         Q            + Q K    +D+  GW  VTR+K R+ N +QKES   +++ + S   +K G   K M   KPI  + E  LQ              
Subjt:  SQPEAPGNDFLYEDDIQEKIRQIEDEDGGWTLVTRRKNRKQNWVQKESHLFREHKRKSRPRRKNG--KKYMRRLKPILEESEKKLQKEGYAIPISRAGLG

Query:  YKSPEPVRITRKGKAKVADTLHITVEEIDDSEQAKEDEIDHRTSALDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSVFQRLSMASEEKGSVHST
        +    P  I        A  + +        E    +EI+ RTS  DRI PS TRSSVFQRLS A  E+E+Q PT+  TR S F+RLS+++ +K      
Subjt:  YKSPEPVRITRKGKAKVADTLHITVEEIDDSEQAKEDEIDHRTSALDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSVFQRLSMASEEKGSVHST

Query:  PTTRLSAFQRLSVVTKRSEEQ
        P+T  SAF RL +   + + +
Subjt:  PTTRLSAFQRLSVVTKRSEEQ

TrEMBL top hitse value%identityAlignment
A0A5A7TJG8 Ty3-gypsy retrotransposon protein8.7e-4031.35Show/hide
Query:  IWNQMAEPNQGGMIIQENPL----FGYSTSSSEQAKEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAA
        IW Q+++P +GG++I+ENP     + +S  SSE   E+  P++MSVM+ ++ T E RMAELE+KVNMLMK VEERD EIA LKNHIESRD AESS     
Subjt:  IWNQMAEPNQGGMIIQENPL----FGYSTSSSEQAKEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAA

Query:  KNNDKGKAVIQENQPQHSTSIASLPVQQLQDMIMSSIRAQYG----------------------------------------------------------
        KN DKGKAV+QE+QPQ+STSI SL VQQLQ+MI +SI+ QYG                                                          
Subjt:  KNNDKGKAVIQENQPQHSTSIASLPVQQLQDMIMSSIRAQYG----------------------------------------------------------

Query:  -----------------------------------------------------------------------------------------SLIQFGTFEPI
                                                                                                 SLIQFGT  PI
Subjt:  -----------------------------------------------------------------------------------------SLIQFGTFEPI

Query:  IVWSQPEAPGNDFLYEDDIQEKIRQIEDEDGGWTLVTRRKNRKQNWVQKESHLFREHKRKSRPRRKNGK--KYMRRLKPILEESEKKLQKEGYAIPISRA
        +V  Q        +   + Q K    +D+  GW  VTR+K R+ N +QKES   +++ + S   +K G+  K M   KPI  + E  LQ           
Subjt:  IVWSQPEAPGNDFLYEDDIQEKIRQIEDEDGGWTLVTRRKNRKQNWVQKESHLFREHKRKSRPRRKNGK--KYMRRLKPILEESEKKLQKEGYAIPISRA

Query:  GLGYKSPEPVRITRKGKAKVADTLHITVEEIDDSEQAKEDEIDHRTSALDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSVFQRLSMASEEKGSV
           +    P  I        A  + +        E    +EI+ RTS  DRI PS TR+SVFQRLS    E+E+Q PT+  TR S   + S    +K  +
Subjt:  GLGYKSPEPVRITRKGKAKVADTLHITVEEIDDSEQAKEDEIDHRTSALDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSVFQRLSMASEEKGSV

Query:  HSTP
           P
Subjt:  HSTP

A0A5A7TZU9 Ribonuclease H1.1e-3762.24Show/hide
Query:  IWNQMAEPNQGGMIIQENPLFGYSTSSSEQA-KEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAAKNN
        IW Q+++P +GG++I+ENP      S SE++ +E+  P++MSVM+ D+ T E+RMAELE+KVNMLMKAVEERD EIA LKNHIESRD AESS T   KN 
Subjt:  IWNQMAEPNQGGMIIQENPLFGYSTSSSEQA-KEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAAKNN

Query:  DKGKAVIQENQPQHSTSIASLPVQQLQDMIMSSIRAQYGSLIQ
        +KGKA++QE+QPQ+STSIASL VQQLQ+MI +SI+ QYG   Q
Subjt:  DKGKAVIQENQPQHSTSIASLPVQQLQDMIMSSIRAQYGSLIQ

A0A5A7TZU9 Ribonuclease H4.3e-3152.5Show/hide
Query:  KPILEESEKKLQKEGYAIPISRAGLGYKSPEPVRITRKGKAKVADTLHITVEEIDDSEQAKEDEIDHRTSALDRIGPSVTRSSVFQRLSTAAIEDESQHP
        +P L  ++KKLQK+GY+IP SRAG+GY+S EPVRIT KGKAKVA+T HITVEE  DSE+ K+     R+S  DRI  S  R SVFQR+ST+  +D +Q  
Subjt:  KPILEESEKKLQKEGYAIPISRAGLGYKSPEPVRITRKGKAKVADTLHITVEEIDDSEQAKEDEIDHRTSALDRIGPSVTRSSVFQRLSTAAIEDESQHP

Query:  TYGSTRPSVFQRLSMASEEKGSVHSTPTTRLSAFQRLSVVTKRSEEQSPILASNITETAT
        T  STR S FQRL+ ++++  S+  TPTTR SAF+RLSV   R ++++ +  SN +   T
Subjt:  TYGSTRPSVFQRLSMASEEKGSVHSTPTTRLSAFQRLSVVTKRSEEQSPILASNITETAT

A0A5A7TZU9 Ribonuclease H2.4e-1346.32Show/hide
Query:  GSLIQFGTFEPIIVWSQPEAPGNDFLYEDDIQEKIRQIEDEDGGWTLVTRRKNRKQNWVQKESHLFREHKRKSRPRRKNGKKYMRRLKPILEESE
        GSLIQFG+ EP++++S PE   N+    D  +E+ +Q+++ + GWTLVTRRK RKQ++ QKES  +R ++ K + +R+N +K  R+  PI+EESE
Subjt:  GSLIQFGTFEPIIVWSQPEAPGNDFLYEDDIQEKIRQIEDEDGGWTLVTRRKNRKQNWVQKESHLFREHKRKSRPRRKNGKKYMRRLKPILEESE

A0A5A7TZU9 Ribonuclease H2.4e-3761.54Show/hide
Query:  IWNQMAEPNQGGMIIQENPLFGYSTSSSEQA-KEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAAKNN
        IW Q+++P +GG++I+ENP      S SE++ +E+  P++MSVM+ D+ T E+RMAELE+KVNMLMKAVEE+D EIA LKNHIESRD AESS T   KN 
Subjt:  IWNQMAEPNQGGMIIQENPLFGYSTSSSEQA-KEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAAKNN

Query:  DKGKAVIQENQPQHSTSIASLPVQQLQDMIMSSIRAQYGSLIQ
        +KGKA++QE+QPQ+STSIASL VQQLQ+MI +SI+ QYG   Q
Subjt:  DKGKAVIQENQPQHSTSIASLPVQQLQDMIMSSIRAQYGSLIQ

A0A5A7V6H5 Ty3-gypsy retrotransposon protein6.7e-4037.8Show/hide
Query:  EPNQGGMIIQENPLFGYSTSSSEQAKEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAAKNNDKGKAVI
        E  + G++++ENPL+  S S+S ++K+ + PDVM  MMA+I T E  MAE+ERKVN LMK VEERD EI +L+  +++R+ AESSQTP  K  DKGK  +
Subjt:  EPNQGGMIIQENPLFGYSTSSSEQAKEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAAKNNDKGKAVI

Query:  QENQP-QHSTSIASLPVQQLQDMIMSSIRAQYGSLIQFGTFEPIIVWSQPEAPGNDFLYEDDIQEKIRQIEDEDGGWTLVTRRKNRKQNWVQKESHLFRE
        Q+NQP Q S S+ASL VQQL DMI +SIRAQYG   Q                   F+Y     ++I  +    G    +  R   +   ++ +S  FR 
Subjt:  QENQP-QHSTSIASLPVQQLQDMIMSSIRAQYGSLIQFGTFEPIIVWSQPEAPGNDFLYEDDIQEKIRQIEDEDGGWTLVTRRKNRKQNWVQKESHLFRE

Query:  HKRKSRPRRKNGKKYMRRLKPILEESEKKLQKEGYAIPIS-----RAGLGYKSPEPVRITRKGKAKV--ADTLHITVEEIDDSEQAKEDEIDHRTSALDR
        +   ++ +   G+   R  KP +E S+  LQ++ +    S     R+ L     E + +T    A +   D  + + EE+D+S     +EI  +TS  DR
Subjt:  HKRKSRPRRKNGKKYMRRLKPILEESEKKLQKEGYAIPIS-----RAGLGYKSPEPVRITRKGKAKV--ADTLHITVEEIDDSEQAKEDEIDHRTSALDR

Query:  IGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSVFQRLSMASEEKGSVHSTPTTRLSAFQRLSVVTKRSEEQ
        I P  TRSS+FQRLS A  ++E+Q PT   TR S F+RLS++  +K      P T  SAF RL +   + + +
Subjt:  IGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSVFQRLSMASEEKGSVHSTPTTRLSAFQRLSVVTKRSEEQ

A0A5D3CD55 Ty3-gypsy retrotransposon protein1.7e-4331.86Show/hide
Query:  IWNQMAEPNQGGMIIQENPLFGYSTSSSE-QAKEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAAKNN
        IW Q+++P +GG++I+ENP      SSS+  ++E+  P++MSVM+ ++ T E RM ELE+KVNMLMK VEERD EIA LKNHIES D AESS     KN 
Subjt:  IWNQMAEPNQGGMIIQENPLFGYSTSSSE-QAKEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAAKNN

Query:  DKGKAVIQENQPQHSTSIASLPVQQLQDMIMSSIRAQYG-------------------------------------------------------------
        DKGKAV+QE+Q Q+STSI SL VQQLQ+MI +SI+ QYG                                                             
Subjt:  DKGKAVIQENQPQHSTSIASLPVQQLQDMIMSSIRAQYG-------------------------------------------------------------

Query:  --------------------------------------------------------------------------------------SLIQFGTFEPIIVW
                                                                                              SLIQFGTF PI+V 
Subjt:  --------------------------------------------------------------------------------------SLIQFGTFEPIIVW

Query:  SQPEAPGNDFLYEDDIQEKIRQIEDEDGGWTLVTRRKNRKQNWVQKESHLFREHKRKSRPRRKNG--KKYMRRLKPILEESEKKLQKEGYAIPISRAGLG
         Q            + Q K    +D+  GW  VTR+K R+ N +QKES   +++ + S   +K G   K M   KPI  + E  LQ              
Subjt:  SQPEAPGNDFLYEDDIQEKIRQIEDEDGGWTLVTRRKNRKQNWVQKESHLFREHKRKSRPRRKNG--KKYMRRLKPILEESEKKLQKEGYAIPISRAGLG

Query:  YKSPEPVRITRKGKAKVADTLHITVEEIDDSEQAKEDEIDHRTSALDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSVFQRLSMASEEKGSVHST
        +    P  I        A  + +        E    +EI+ RTS  DRI PS TRSSVFQRLS A  E+E+Q PT+  TR S F+RLS+++ +K      
Subjt:  YKSPEPVRITRKGKAKVADTLHITVEEIDDSEQAKEDEIDHRTSALDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSVFQRLSMASEEKGSVHST

Query:  PTTRLSAFQRLSVVTKRSEEQ
        P+T  SAF RL +   + + +
Subjt:  PTTRLSAFQRLSVVTKRSEEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATGGAACCAGATGGCAGAGCCAAATCAAGGCGGAATGATCATCCAAGAAAATCCTTTATTTGGCTATTCTACTTCATCTTCTGAGCAAGCAAAGGAGATATCAGA
TCCTGACGTGATGTCTGTAATGATGGCTGACATAGGTACAGGCGAAGAAAGAATGGCTGAACTGGAAAGGAAGGTCAACATGCTGATGAAGGCGGTGGAAGAGAGAGATT
GTGAAATTGCCTCTCTAAAAAATCACATTGAAAGTCGTGATATCGCTGAATCAAGCCAAACACCCGCTGCAAAGAATAATGACAAAGGGAAGGCTGTCATACAAGAAAAC
CAGCCTCAACATTCCACTTCAATTGCTTCGCTGCCTGTTCAGCAACTCCAAGATATGATTATGAGCTCCATTAGAGCTCAATATGGAAGCTTAATCCAATTTGGTACCTT
TGAACCTATTATCGTTTGGTCTCAACCAGAGGCCCCAGGAAATGACTTCCTCTACGAAGATGATATTCAAGAAAAGATTAGACAAATTGAAGACGAAGATGGAGGCTGGA
CACTCGTAACGCGACGGAAGAACCGAAAGCAAAATTGGGTTCAGAAGGAATCTCATTTGTTTCGAGAACACAAAAGAAAAAGCAGGCCTCGAAGGAAAAATGGGAAGAAG
TACATGAGAAGGCTCAAGCCTATCTTAGAAGAAAGTGAGAAGAAACTTCAAAAAGAGGGTTATGCTATACCCATTTCAAGAGCTGGTCTTGGATATAAATCTCCTGAGCC
GGTTCGAATCACAAGAAAAGGGAAAGCGAAAGTTGCAGATACACTTCACATTACAGTGGAAGAAATCGATGATTCCGAACAGGCTAAAGAAGACGAAATAGATCATAGAA
CTTCTGCACTTGATCGCATTGGACCGTCGGTTACACGATCCTCGGTTTTTCAAAGATTGAGTACAGCTGCAATAGAAGATGAAAGTCAGCATCCAACTTATGGCTCCACA
CGACCTTCGGTCTTCCAAAGGCTGAGTATGGCTTCTGAGGAAAAAGGGAGCGTGCATTCAACCCCTACTACACGACTATCAGCTTTCCAAAGGTTGAGCGTAGTCACAAA
AAGGAGTGAAGAACAATCTCCTATATTAGCCTCAAACATAACAGAGACTGCTACCAAGGCAAAA
mRNA sequenceShow/hide mRNA sequence
ATGATATGGAACCAGATGGCAGAGCCAAATCAAGGCGGAATGATCATCCAAGAAAATCCTTTATTTGGCTATTCTACTTCATCTTCTGAGCAAGCAAAGGAGATATCAGA
TCCTGACGTGATGTCTGTAATGATGGCTGACATAGGTACAGGCGAAGAAAGAATGGCTGAACTGGAAAGGAAGGTCAACATGCTGATGAAGGCGGTGGAAGAGAGAGATT
GTGAAATTGCCTCTCTAAAAAATCACATTGAAAGTCGTGATATCGCTGAATCAAGCCAAACACCCGCTGCAAAGAATAATGACAAAGGGAAGGCTGTCATACAAGAAAAC
CAGCCTCAACATTCCACTTCAATTGCTTCGCTGCCTGTTCAGCAACTCCAAGATATGATTATGAGCTCCATTAGAGCTCAATATGGAAGCTTAATCCAATTTGGTACCTT
TGAACCTATTATCGTTTGGTCTCAACCAGAGGCCCCAGGAAATGACTTCCTCTACGAAGATGATATTCAAGAAAAGATTAGACAAATTGAAGACGAAGATGGAGGCTGGA
CACTCGTAACGCGACGGAAGAACCGAAAGCAAAATTGGGTTCAGAAGGAATCTCATTTGTTTCGAGAACACAAAAGAAAAAGCAGGCCTCGAAGGAAAAATGGGAAGAAG
TACATGAGAAGGCTCAAGCCTATCTTAGAAGAAAGTGAGAAGAAACTTCAAAAAGAGGGTTATGCTATACCCATTTCAAGAGCTGGTCTTGGATATAAATCTCCTGAGCC
GGTTCGAATCACAAGAAAAGGGAAAGCGAAAGTTGCAGATACACTTCACATTACAGTGGAAGAAATCGATGATTCCGAACAGGCTAAAGAAGACGAAATAGATCATAGAA
CTTCTGCACTTGATCGCATTGGACCGTCGGTTACACGATCCTCGGTTTTTCAAAGATTGAGTACAGCTGCAATAGAAGATGAAAGTCAGCATCCAACTTATGGCTCCACA
CGACCTTCGGTCTTCCAAAGGCTGAGTATGGCTTCTGAGGAAAAAGGGAGCGTGCATTCAACCCCTACTACACGACTATCAGCTTTCCAAAGGTTGAGCGTAGTCACAAA
AAGGAGTGAAGAACAATCTCCTATATTAGCCTCAAACATAACAGAGACTGCTACCAAGGCAAAA
Protein sequenceShow/hide protein sequence
MIWNQMAEPNQGGMIIQENPLFGYSTSSSEQAKEISDPDVMSVMMADIGTGEERMAELERKVNMLMKAVEERDCEIASLKNHIESRDIAESSQTPAAKNNDKGKAVIQEN
QPQHSTSIASLPVQQLQDMIMSSIRAQYGSLIQFGTFEPIIVWSQPEAPGNDFLYEDDIQEKIRQIEDEDGGWTLVTRRKNRKQNWVQKESHLFREHKRKSRPRRKNGKK
YMRRLKPILEESEKKLQKEGYAIPISRAGLGYKSPEPVRITRKGKAKVADTLHITVEEIDDSEQAKEDEIDHRTSALDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGST
RPSVFQRLSMASEEKGSVHSTPTTRLSAFQRLSVVTKRSEEQSPILASNITETATKAK