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Spg021834 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021834
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationscaffold2:4376702..4378043
RNA-Seq ExpressionSpg021834
SyntenySpg021834
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2641.21Show/hide
Query:  MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRM
        MFL+++Q   P L+AT+L TQI+   D++F  + L +IA H  P F A + M   LF +YSVD  ++S +SL  FH+A+LDG   FSSM++H+LE   +M
Subjt:  MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRM

Query:  ILRFEN-SWFMPQLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKE
        ILR+EN S   P L  EL   P Q   LGQ+ +   F+++++  ++II  L ++ +  + V  T++   FS+A++EIT+TKE
Subjt:  ILRFEN-SWFMPQLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKE

XP_008458682.1 PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo]5.5e-2942.31Show/hide
Query:  MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRM
        MFL+R++   P ++AT+L  Q+A   D+KF    LM+I  ++ P F A + +   LF ++SVD + +S +SL  FH+A+LDG   FSSMT+HLL+ T++M
Subjt:  MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRM

Query:  ILRFEN-SWFMPQLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKE
        +LRFE  S  +P L  EL   P Q   LGQ+ + N F++ + E +RII  L ++   T+ VT+T S+  FS+ ++EI LTKE
Subjt:  ILRFEN-SWFMPQLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKE

XP_016903187.1 PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo]7.2e-2942.54Show/hide
Query:  MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRM
        MFL+R+++ +P  +AT+   QIA + D+KF      +IA ++ P F A + M    F +Y VD  H S ISL  FH+ALLDG     SMT+HLL    ++
Subjt:  MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRM

Query:  ILRFENSWFMPQLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKE
        ILRFE+S   P++  EL+  P+Q   LG++ +A  FSID+++ +R+I  L I+   +I VT T S+  FS+A++EI LTKE
Subjt:  ILRFENSWFMPQLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKE

XP_022145570.1 uncharacterized protein LOC111014988 [Momordica charantia]7.9e-2843.65Show/hide
Query:  MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRM
        MFLIR+Q I P  +A    T+IA + D+KF      +I     P F A + M    F  ++VD +H S I L   H+ L+DGR  + +MT HLLE  +R+
Subjt:  MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRM

Query:  ILRFENSWFMPQLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKE
        +LRFENS  +P+ RREL   P++   +G++ + N  SI ++EF+ I+T LS Y N+ I  TLT+S+  FSVA EEI LTKE
Subjt:  ILRFENSWFMPQLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKE

XP_031744160.1 uncharacterized protein LOC116404808 [Cucumis sativus]8.5e-3044.2Show/hide
Query:  MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRM
        MFL+R++N  PF +AT+    IA + D+KF      +   +Q P F A + M    F +Y VD  H S ISL  FH+ALLDG     SMT+HLL   ++M
Subjt:  MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRM

Query:  ILRFENSWFMPQLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKE
        ILRFE+S   PQ+R EL+  P+Q   LG++ +A  FSID++  +R+I  L I+   +I VT T S+  FS+A++EI LTKE
Subjt:  ILRFENSWFMPQLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKE

TrEMBL top hitse value%identityAlignment
A0A1S3C8J1 uncharacterized protein LOC1034980102.7e-2942.31Show/hide
Query:  MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRM
        MFL+R++   P ++AT+L  Q+A   D+KF    LM+I  ++ P F A + +   LF ++SVD + +S +SL  FH+A+LDG   FSSMT+HLL+ T++M
Subjt:  MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRM

Query:  ILRFEN-SWFMPQLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKE
        +LRFE  S  +P L  EL   P Q   LGQ+ + N F++ + E +RII  L ++   T+ VT+T S+  FS+ ++EI LTKE
Subjt:  ILRFEN-SWFMPQLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKE

A0A1S4E4N8 uncharacterized protein LOC1035022633.5e-2942.54Show/hide
Query:  MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRM
        MFL+R+++ +P  +AT+   QIA + D+KF      +IA ++ P F A + M    F +Y VD  H S ISL  FH+ALLDG     SMT+HLL    ++
Subjt:  MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRM

Query:  ILRFENSWFMPQLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKE
        ILRFE+S   P++  EL+  P+Q   LG++ +A  FSID+++ +R+I  L I+   +I VT T S+  FS+A++EI LTKE
Subjt:  ILRFENSWFMPQLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKE

A0A6J1CUU8 uncharacterized protein LOC1110149883.8e-2843.65Show/hide
Query:  MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRM
        MFLIR+Q I P  +A    T+IA + D+KF      +I     P F A + M    F  ++VD +H S I L   H+ L+DGR  + +MT HLLE  +R+
Subjt:  MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRM

Query:  ILRFENSWFMPQLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKE
        +LRFENS  +P+ RREL   P++   +G++ + N  SI ++EF+ I+T LS Y N+ I  TLT+S+  FSVA EEI LTKE
Subjt:  ILRFENSWFMPQLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKE

A0A6J1H2Z8 uncharacterized protein LOC1114600114.4e-2441.76Show/hide
Query:  MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRM
        MFL+R+ + +P + AT++  QI+N+ DLKF      +I  +    F A   +    FA+Y VDR+H+S +SL  F+NA+  G   FSSMT+H  E TSRM
Subjt:  MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRM

Query:  ILRFENS-WFMPQLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKE
        +L+FE+S     Q+ R L   P+Q   LGQ+     FSI +++F+ IIT L  + N +I V+LT+S   F  A+EE  LTKE
Subjt:  ILRFENS-WFMPQLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKE

A0A6J1KZ05 uncharacterized protein LOC1114988871.2e-2442.31Show/hide
Query:  MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRM
        MFL+R+ + +P   AT+L  QI+N+ DLKF      +I  +    F A   +    FA+YSVDR+H+S +SL  F++A+ DG   FSSMT+H  E TSRM
Subjt:  MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRM

Query:  ILRFENSWFMP-QLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKE
        +L+FE+S     ++ R L   P+Q   LGQ+     FSI +++F+ IIT L  + N +I V+LT+S   F  A+EE  LTKE
Subjt:  ILRFENSWFMP-QLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGATCAGGATTCAGAACATCAATCCTTTTCTGAACGCAACCACCCTGTTCACTCAAATTGCTAACCAAGTCGATCTGAAATTCGAGCGGTACGCATTAATGAT
GATTGCTCGGCACCAGCTGCCTCTCTTCGAGGCAGTCATGTTTATGCCGGAACCATTATTCGCCCACTATTCCGTCGATCGGAGTCACGCTTCAACGATTTCCCTCCATT
ACTTCCACAATGCTCTGTTGGATGGCCGCCAAGATTTTTCTTCAATGACGATGCATCTTCTGGAACGCACGAGTCGGATGATCCTTAGATTCGAGAATTCATGGTTTATG
CCACAATTGCGTCGTGAATTGACATTCTGGCCTGCACAGAACTACATTCTTGGCCAATTAATCTTTGCAAACACTTTCTCAATCGATGCAGAAGAGTTTAAACGCATTAT
AACAACACTGTCGATCTACGAGAATTATACAATTTTGGTTACCCTAACGAATTCAGAAGCCAATTTCTCTGTTGCAACCGAGGAGATAACTCTCACCAAAGAGGTATGTT
CACAATTGAAACTATTTTTTTTTATTGATGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGATCAGGATTCAGAACATCAATCCTTTTCTGAACGCAACCACCCTGTTCACTCAAATTGCTAACCAAGTCGATCTGAAATTCGAGCGGTACGCATTAATGAT
GATTGCTCGGCACCAGCTGCCTCTCTTCGAGGCAGTCATGTTTATGCCGGAACCATTATTCGCCCACTATTCCGTCGATCGGAGTCACGCTTCAACGATTTCCCTCCATT
ACTTCCACAATGCTCTGTTGGATGGCCGCCAAGATTTTTCTTCAATGACGATGCATCTTCTGGAACGCACGAGTCGGATGATCCTTAGATTCGAGAATTCATGGTTTATG
CCACAATTGCGTCGTGAATTGACATTCTGGCCTGCACAGAACTACATTCTTGGCCAATTAATCTTTGCAAACACTTTCTCAATCGATGCAGAAGAGTTTAAACGCATTAT
AACAACACTGTCGATCTACGAGAATTATACAATTTTGGTTACCCTAACGAATTCAGAAGCCAATTTCTCTGTTGCAACCGAGGAGATAACTCTCACCAAAGAGGTATGTT
CACAATTGAAACTATTTTTTTTTATTGATGAATAA
Protein sequenceShow/hide protein sequence
MFLIRIQNINPFLNATTLFTQIANQVDLKFERYALMMIARHQLPLFEAVMFMPEPLFAHYSVDRSHASTISLHYFHNALLDGRQDFSSMTMHLLERTSRMILRFENSWFM
PQLRRELTFWPAQNYILGQLIFANTFSIDAEEFKRIITTLSIYENYTILVTLTNSEANFSVATEEITLTKEVCSQLKLFFFIDE