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Spg021841 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021841
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransmembrane protein 230
Genome locationscaffold2:2739152..2740140
RNA-Seq ExpressionSpg021841
SyntenySpg021841
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005776 - autophagosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008590 - Transmembrane protein 230/134
IPR044234 - Transmembrane protein 230


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021684.1 Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]2.8e-4895.15Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPP+KEIALAVSLL FGM+GI+VG FMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_004146339.1 transmembrane protein 230 [Cucumis sativus]3.7e-4895.15Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPP+KEIALAVSLLVFGM+GIIVG FMASNRVGGDR HGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_008453547.1 PREDICTED: transmembrane protein 230-like [Cucumis melo]1.3e-4896.12Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPP+KEIALAVSLLVFGM+GIIVG FMASNRVGGDRAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_022931504.1 transmembrane protein 230-like [Cucurbita moschata]2.1e-4896.12Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPP+KEIALAVSLL FGM+GIIVG FMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_038879685.1 transmembrane protein 230 [Benincasa hispida]5.6e-4996.12Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPP+KEIALAVSLLVFGM+GI+VG FMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

TrEMBL top hitse value%identityAlignment
A0A0A0LUC1 Transmembrane protein 2301.8e-4895.15Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPP+KEIALAVSLLVFGM+GIIVG FMASNRVGGDR HGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A1S3BWL2 Transmembrane protein 2306.1e-4996.12Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPP+KEIALAVSLLVFGM+GIIVG FMASNRVGGDRAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1EUE9 Transmembrane protein 2301.0e-4896.12Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPP+KEIALAVSLL FGM+GIIVG FMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1I4W8 Transmembrane protein 2301.0e-4896.12Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPP+KEIALAVSLL FGM+GIIVG FMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1JDX9 Transmembrane protein 2301.5e-4793.2Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI DEDI+MDSPF VNNRPP+KEIALAVSLLVFGM+GI+VG FMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

SwissProt top hitse value%identityAlignment
Q5BJP5 Transmembrane protein 2308.3e-1148.05Show/hide
Query:  PVKEIALAVSLLVFGMLGIIVGTFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   II+G+ + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PVKEIALAVSLLVFGMLGIIVGTFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q5R8X3 Transmembrane protein 2304.9e-1148.05Show/hide
Query:  PVKEIALAVSLLVFGMLGIIVGTFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   II+G+ + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PVKEIALAVSLLVFGMLGIIVGTFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q5ZLH4 Transmembrane protein 2301.4e-1048.05Show/hide
Query:  PVKEIALAVSLLVFGMLGIIVGTFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALAV L + G   II+G  + +  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PVKEIALAVSLLVFGMLGIIVGTFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q8CIB6 Transmembrane protein 2308.3e-1148.05Show/hide
Query:  PVKEIALAVSLLVFGMLGIIVGTFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   II+G+ + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PVKEIALAVSLLVFGMLGIIVGTFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q96A57 Transmembrane protein 2308.3e-1148.05Show/hide
Query:  PVKEIALAVSLLVFGMLGIIVGTFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   II+G+ + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PVKEIALAVSLLVFGMLGIIVGTFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Arabidopsis top hitse value%identityAlignment
AT2G19350.1 Eukaryotic protein of unknown function (DUF872)2.2e-4379.61Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI+DED+M+ + +TV+NRPPVKEI+LAV LLVFG LGI++G FMA NRVGGDR HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        P V
Subjt:  PPV

AT3G29170.1 Eukaryotic protein of unknown function (DUF872)5.9e-1245.45Show/hide
Query:  NRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        +R P K IALAV LL  G L +++  F+    + GD + G    +LG L F+PGFY TRIAYY+++G +G+ F+ IP
Subjt:  NRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

AT4G29850.1 Eukaryotic protein of unknown function (DUF872)4.8e-4684.47Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIM+++ +TVNNRPPVKEIALAV+LLVFG LGI+ G FMA NRVGGDR HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTACGTGGACCATGCGTTTTCGATTACAGACGAGGACATTATGATGGATTCTCCGTTTACGGTCAACAATCGCCCCCCTGTCAAGGAGATCGCTCTTGCCGTTTC
TCTTCTCGTTTTTGGCATGCTTGGAATCATCGTTGGTACCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTTTTCTCGCTGTTGGGAGCTCTCT
TGTTTATTCCGGGTTTCTATTACACGCGGATTGCTTACTATGCTTACAAGGGTTACAAGGGTTTCTCCTTCTCCAACATACCTCCTGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTACGTGGACCATGCGTTTTCGATTACAGACGAGGACATTATGATGGATTCTCCGTTTACGGTCAACAATCGCCCCCCTGTCAAGGAGATCGCTCTTGCCGTTTC
TCTTCTCGTTTTTGGCATGCTTGGAATCATCGTTGGTACCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTTTTCTCGCTGTTGGGAGCTCTCT
TGTTTATTCCGGGTTTCTATTACACGCGGATTGCTTACTATGCTTACAAGGGTTACAAGGGTTTCTCCTTCTCCAACATACCTCCTGTCTAA
Protein sequenceShow/hide protein sequence
MAYVDHAFSITDEDIMMDSPFTVNNRPPVKEIALAVSLLVFGMLGIIVGTFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV