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Spg021845 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021845
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGTP-binding nuclear protein Ran-3-like
Genome locationscaffold2:6798107..6798496
RNA-Seq ExpressionSpg021845
SyntenySpg021845
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589876.1 hypothetical protein SDJN03_15299, partial [Cucurbita argyrosperma subsp. sororia]6.0e-4879.84Show/hide
Query:  MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLMT
        MAT+L TF P  IRACA+S    +D  RRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNK++P+NLA G SKSD   K AR RFSPGCFTE+KARQLRLMT
Subjt:  MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLMT

Query:  METESFHDVMYHSAIASRLASDFKNRADS
        METESFHDVMYHSAIASRLA+DFK+RADS
Subjt:  METESFHDVMYHSAIASRLASDFKNRADS

XP_011656185.1 uncharacterized protein LOC105435656 [Cucumis sativus]6.8e-5284.5Show/hide
Query:  MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLMT
        MATNLLTFPPAGIRACA+S DRRSD +RRKT   SSSSNWWAPVFGWSSEPDYIDSGNKA+PQNLAGG+SK D   K  R RFSPGCFTEAKARQLR+MT
Subjt:  MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLMT

Query:  METESFHDVMYHSAIASRLASDFKNRADS
         ETESFHDVMYHSAIASRLASDFK+R DS
Subjt:  METESFHDVMYHSAIASRLASDFKNRADS

XP_016903293.1 PREDICTED: uncharacterized protein LOC103502747 [Cucumis melo]1.7e-4780.77Show/hide
Query:  MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDS-GNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLM
        MATNLLTF PAGIRACAAS DRRSD  RRK   +SSS+NWWAPVFGWSSEPDYIDS  NKA+PQNLAG  SK D   K  R RFSPGCFTEAKARQLR+M
Subjt:  MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDS-GNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLM

Query:  TMETESFHDVMYHSAIASRLASDFKNRADS
        T ETESFHDVMYHSAIASRLASDFK+R DS
Subjt:  TMETESFHDVMYHSAIASRLASDFKNRADS

XP_022960569.1 uncharacterized protein LOC111461308 [Cucurbita moschata]5.6e-4676.74Show/hide
Query:  MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLMT
        MATNL TF P  IRACA+S D      R+ +SSSSSSSNWWAPVFGWSSEPDYIDSGNK++P+NLA G SKSD   K +R RFSPGCFTE+KARQLRLMT
Subjt:  MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLMT

Query:  METESFHDVMYHSAIASRLASDFKNRADS
        METESFHDVMYHSAIASRLA+DFK+R DS
Subjt:  METESFHDVMYHSAIASRLASDFKNRADS

XP_038880363.1 uncharacterized protein LOC120072011 [Benincasa hispida]4.0e-5285.27Show/hide
Query:  MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLMT
        MATNLLTFPPAGIRACAAS DRRSD  RRKT   SSSSNWWAPVFGWSSEPDYIDS NKA+PQ+LAGG SKSD   K  R RFSPGCFTEAKARQLR+MT
Subjt:  MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLMT

Query:  METESFHDVMYHSAIASRLASDFKNRADS
         ETESFHDVMYHSAIASRLASDFK RADS
Subjt:  METESFHDVMYHSAIASRLASDFKNRADS

TrEMBL top hitse value%identityAlignment
A0A0A0LTN7 Uncharacterized protein3.3e-5284.5Show/hide
Query:  MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLMT
        MATNLLTFPPAGIRACA+S DRRSD +RRKT   SSSSNWWAPVFGWSSEPDYIDSGNKA+PQNLAGG+SK D   K  R RFSPGCFTEAKARQLR+MT
Subjt:  MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLMT

Query:  METESFHDVMYHSAIASRLASDFKNRADS
         ETESFHDVMYHSAIASRLASDFK+R DS
Subjt:  METESFHDVMYHSAIASRLASDFKNRADS

A0A1S4E4Y4 uncharacterized protein LOC1035027478.4e-4880.77Show/hide
Query:  MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDS-GNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLM
        MATNLLTF PAGIRACAAS DRRSD  RRK   +SSS+NWWAPVFGWSSEPDYIDS  NKA+PQNLAG  SK D   K  R RFSPGCFTEAKARQLR+M
Subjt:  MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDS-GNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLM

Query:  TMETESFHDVMYHSAIASRLASDFKNRADS
        T ETESFHDVMYHSAIASRLASDFK+R DS
Subjt:  TMETESFHDVMYHSAIASRLASDFKNRADS

A0A5D3CSV6 Uncharacterized protein8.4e-4880.77Show/hide
Query:  MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDS-GNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLM
        MATNLLTF PAGIRACAAS DRRSD  RRK   +SSS+NWWAPVFGWSSEPDYIDS  NKA+PQNLAG  SK D   K  R RFSPGCFTEAKARQLR+M
Subjt:  MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDS-GNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLM

Query:  TMETESFHDVMYHSAIASRLASDFKNRADS
        T ETESFHDVMYHSAIASRLASDFK+R DS
Subjt:  TMETESFHDVMYHSAIASRLASDFKNRADS

A0A6J1HBD8 uncharacterized protein LOC1114613082.7e-4676.74Show/hide
Query:  MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLMT
        MATNL TF P  IRACA+S D      R+ +SSSSSSSNWWAPVFGWSSEPDYIDSGNK++P+NLA G SKSD   K +R RFSPGCFTE+KARQLRLMT
Subjt:  MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLMT

Query:  METESFHDVMYHSAIASRLASDFKNRADS
        METESFHDVMYHSAIASRLA+DFK+R DS
Subjt:  METESFHDVMYHSAIASRLASDFKNRADS

A0A6J1JBM9 uncharacterized protein LOC1114853097.4e-4475.97Show/hide
Query:  MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLMT
        MATNL TF P  IRACA+S    +D  RRKT  SSSSSNWWAPVFGWSSEPDYIDS NK++P+  A G SKSD   K AR RFSPGCFTE+KARQLRLMT
Subjt:  MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLMT

Query:  METESFHDVMYHSAIASRLASDFKNRADS
        METESFHDVMYHSAIASRLA+DFK+R DS
Subjt:  METESFHDVMYHSAIASRLASDFKNRADS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52720.1 unknown protein1.2e-1745.69Show/hide
Query:  IRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLMTMETESFHDVMYH
        IRA + S     DQ R+K      S+ WWAP+FG  S+PDY++  +     N      K+D     +  +F  GCFTE KA+QLR  T E  +FHDVMYH
Subjt:  IRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLMTMETESFHDVMYH

Query:  SAIASRLASDFKNRAD
        SAIASRLASD   R +
Subjt:  SAIASRLASDFKNRAD

AT3G15630.1 unknown protein4.9e-1646.61Show/hide
Query:  AGIRACAASTDRR----SDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLMTMETESF
        A I +C+A +  R    SD  R+K  SS S   WWAP+FG SSEPDY++        NL     K+++       R    C TE KA+QLR  T E  +F
Subjt:  AGIRACAASTDRR----SDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLMTMETESF

Query:  HDVMYHSAIASRLASDFK
        HDVMYHSAIASRLASD +
Subjt:  HDVMYHSAIASRLASDFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCAATCTCCTCACCTTTCCCCCCGCCGGCATCCGTGCCTGCGCCGCCTCCACCGACCGCCGCTCCGACCAGACTCGCCGGAAAACCTCTTCCTCCTCCTCCTC
ATCCAACTGGTGGGCCCCGGTCTTCGGCTGGTCCTCGGAGCCCGACTACATCGACTCCGGCAACAAGGCCGATCCTCAAAACCTCGCCGGCGGAACCTCAAAATCGGATC
GGGTGCCGAAACCGGCGAGGACTCGATTTTCCCCTGGCTGCTTCACGGAGGCCAAGGCGCGGCAGCTCCGCCTCATGACGATGGAAACGGAGTCGTTTCACGACGTTATG
TACCACTCGGCAATCGCATCTCGGCTCGCTTCCGACTTCAAAAATCGCGCCGATTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACCAATCTCCTCACCTTTCCCCCCGCCGGCATCCGTGCCTGCGCCGCCTCCACCGACCGCCGCTCCGACCAGACTCGCCGGAAAACCTCTTCCTCCTCCTCCTC
ATCCAACTGGTGGGCCCCGGTCTTCGGCTGGTCCTCGGAGCCCGACTACATCGACTCCGGCAACAAGGCCGATCCTCAAAACCTCGCCGGCGGAACCTCAAAATCGGATC
GGGTGCCGAAACCGGCGAGGACTCGATTTTCCCCTGGCTGCTTCACGGAGGCCAAGGCGCGGCAGCTCCGCCTCATGACGATGGAAACGGAGTCGTTTCACGACGTTATG
TACCACTCGGCAATCGCATCTCGGCTCGCTTCCGACTTCAAAAATCGCGCCGATTCCTGA
Protein sequenceShow/hide protein sequence
MATNLLTFPPAGIRACAASTDRRSDQTRRKTSSSSSSSNWWAPVFGWSSEPDYIDSGNKADPQNLAGGTSKSDRVPKPARTRFSPGCFTEAKARQLRLMTMETESFHDVM
YHSAIASRLASDFKNRADS