CuGenDBv2

Gene ID	Spg021846
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	embryo defective 2752
Genome location	scaffold2:8353152..8356031
RNA-Seq Expression	Spg021846
Synteny	Spg021846
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR037759 - Uncharacterized protein At4g29660-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6589991.1 hypothetical protein SDJN03_15414, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-49

93.81

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Query:  MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK
        MASYLWRKYADY+Y+KWERTILWDM+DPYRRPKSFTPLVTIYI AFY+GVVGAAITEQLYKEKYWEDHPGE VPLMKPKFYYGPWRVMRGEVPAHTK
Subjt:  MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK

XP_008450847.1 PREDICTED: uncharacterized protein At4g29660 [Cucumis melo]

3.4e-48

91.75

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Query:  MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK
        MASYLWRKYADY+Y+KWE+T+LWDMIDPYRRPKSFTPLV+IYI AFY+GVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFY GPWRVMRGEVPAHTK
Subjt:  MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK

XP_022147559.1 uncharacterized protein At4g29660 [Momordica charantia]

2.2e-50

95.88

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Query:  MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK
        MASYLWRKYADYVY+KWERTILWDM+DPYRRPKSFTPLV+IYI AFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK
Subjt:  MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK

XP_022961093.1 uncharacterized protein At4g29660 [Cucurbita moschata]

1.8e-49

93.81

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Query:  MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK
        MASYLWRKYADY+Y+KWERTILWDM+DPYRRPKSFTPLVTIYI AFY+GVVGAAITEQLYKEKYWEDHPGE VPLMKPKFYYGPWRVMRGEVPAHTK
Subjt:  MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK

XP_038878275.1 uncharacterized protein At4g29660 [Benincasa hispida]

4.8e-50

94.85

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Query:  MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK
        MASYLWRKYADYVY+KWERTILWDM+DPYRRPKSFTPLV+IYI AFY+GVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK
Subjt:  MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0M1X3 Uncharacterized protein

6.3e-48

89.69

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Query:  MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK
        MASYLWRKYADY+++KWE+T+LWDM+DPYRRPKSFTPLV+IYI AFY+GVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFY GPWRVMRGEVPAHTK
Subjt:  MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK

A0A1S3BPK6 uncharacterized protein At4g29660

1.7e-48

91.75

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Query:  MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK
        MASYLWRKYADY+Y+KWE+T+LWDMIDPYRRPKSFTPLV+IYI AFY+GVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFY GPWRVMRGEVPAHTK
Subjt:  MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK

A0A6J1D1D0 uncharacterized protein At4g29660

1.0e-50

95.88

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Query:  MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK
        MASYLWRKYADYVY+KWERTILWDM+DPYRRPKSFTPLV+IYI AFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK
Subjt:  MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK

A0A6J1HAW0 uncharacterized protein At4g29660

8.8e-50

93.81

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Query:  MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK
        MASYLWRKYADY+Y+KWERTILWDM+DPYRRPKSFTPLVTIYI AFY+GVVGAAITEQLYKEKYWEDHPGE VPLMKPKFYYGPWRVMRGEVPAHTK
Subjt:  MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK

A0A6J1JKR6 uncharacterized protein At4g29660

8.8e-50

93.81

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Query:  MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK
        MASYLWRKYADY+Y+KWERTILWDM+DPYRRPKSFTPLVTIYI AFY+GVVGAAITEQLYKEKYWEDHPGE VPLMKPKFYYGPWRVMRGEVPAHTK
Subjt:  MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK

SwissProt top hits

e value

%identity

Alignment

Q94K18 Uncharacterized protein At4g29660

4.9e-37

71.74

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Query:  SYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPA
        S LWRKYADY Y+K+ER  +W+MI+PYRRPK+FT L+TIY+ AFY+GV+GAA+TEQLYKEK+WE+HPG+ VPLMKP FY GPWRV RGE  A
Subjt:  SYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPA

Arabidopsis top hits

e value

%identity

Alignment

AT4G29660.1 embryo defective 2752

3.4e-38

71.74

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Query:  SYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPA
        S LWRKYADY Y+K+ER  +W+MI+PYRRPK+FT L+TIY+ AFY+GV+GAA+TEQLYKEK+WE+HPG+ VPLMKP FY GPWRV RGE  A
Subjt:  SYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPA

Sequences

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CDS sequence

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ATGGCGAGCTATCTATGGAGGAAGTACGCCGATTACGTCTACTCCAAGTGGGAAAGAACGATCCTCTGGGATATGATCGATCCGTATCGGCGCCCGAAATCCTTCACTCC
GTTGGTTACCATCTATATTGTTGCTTTTTACTCTGGGGTCGTCGGCGCTGCCATCACCGAGCAACTCTACAAGGAGAAGTATTGGGAAGATCACCCTGGGGAAGCTGTAC
CTTTAATGAAACCAAAGTTTTATTATGGACCCTGGAGGGTAATGAGGGGAGAAGTCCCTGCACATACGAAGTGA

mRNA sequence

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Protein sequence

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MASYLWRKYADYVYSKWERTILWDMIDPYRRPKSFTPLVTIYIVAFYSGVVGAAITEQLYKEKYWEDHPGEAVPLMKPKFYYGPWRVMRGEVPAHTK

Spg021846 (gene) of Sponge gourd (cylindrica) v1 genome