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Spg021866 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021866
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionVAN3-binding protein isoform X1
Genome locationscaffold2:14551541..14553230
RNA-Seq ExpressionSpg021866
SyntenySpg021866
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008546 - Domain of unknown function DUF828
IPR040269 - VAN3-binding protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013531.1 VAN3-binding protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-4483.47Show/hide
Query:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGN
        MDKTAT PWR EPPP+L    SS+VYRP DTPLEPMEFLSRSWSVSALEVSKALAPPR TLSKHP AGN +VAAV GGGG VILEDLT ELEEGTTFSGN
Subjt:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGN

Query:  PFSCSSSETSQMLMEWIMSQS
        PFS +SSETSQM+ME IMSQS
Subjt:  PFSCSSSETSQMLMEWIMSQS

XP_008449320.1 PREDICTED: VAN3-binding protein isoform X1 [Cucumis melo]5.0e-4582.64Show/hide
Query:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGN
        MDKTATEPWR+EP    P P SS+VYRP DTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHP +GN L+A V  GGGGVILEDLTGEL+EGTTFSGN
Subjt:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGN

Query:  PFSCSSSETSQMLMEWIMSQS
        PFS +SSETSQM+ME IMSQS
Subjt:  PFSCSSSETSQMLMEWIMSQS

XP_022959008.1 VAN3-binding protein-like [Cucurbita moschata]1.1e-4483.47Show/hide
Query:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGN
        MDKTAT PWR EPPP+L    SS+VYRP DTPLEPMEFLSRSWSVSALEVSKALAPPR TLSKHP AGN +VAAV GGGG VILEDLT ELEEGTTFSGN
Subjt:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGN

Query:  PFSCSSSETSQMLMEWIMSQS
        PFS +SSETSQM+ME IMSQS
Subjt:  PFSCSSSETSQMLMEWIMSQS

XP_023006722.1 VAN3-binding protein-like [Cucurbita maxima]1.1e-4483.47Show/hide
Query:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGN
        MDKTAT PWR EPPP+L    SS+VYRP DTPLEPMEFLSRSWSVSALEVSKALAPPR TLSKHP AGN +VAAV GGGG VILEDLT ELEEGTTFSGN
Subjt:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGN

Query:  PFSCSSSETSQMLMEWIMSQS
        PFS +SSETSQM+ME IMSQS
Subjt:  PFSCSSSETSQMLMEWIMSQS

XP_038876247.1 VAN3-binding protein-like isoform X1 [Benincasa hispida]3.9e-4583.47Show/hide
Query:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGN
        MDKTATEPWRLEP    P P SS+VYRP DTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHP  GN L+A V  GGGGVILEDLTGEL+EGTTFSGN
Subjt:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGN

Query:  PFSCSSSETSQMLMEWIMSQS
        PFS +SSETSQM+ME IMSQS
Subjt:  PFSCSSSETSQMLMEWIMSQS

TrEMBL top hitse value%identityAlignment
A0A0A0LIN8 Uncharacterized protein2.7e-4480.99Show/hide
Query:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGN
        MDKTAT+PWR+EP    P P SS+VYRP DTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHP  GN L+A V  GGGGVILEDLTGEL+EGT FSGN
Subjt:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGN

Query:  PFSCSSSETSQMLMEWIMSQS
        PFS +SSETSQM+ME IMSQS
Subjt:  PFSCSSSETSQMLMEWIMSQS

A0A1S3BMP2 VAN3-binding protein isoform X12.4e-4582.64Show/hide
Query:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGN
        MDKTATEPWR+EP    P P SS+VYRP DTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHP +GN L+A V  GGGGVILEDLTGEL+EGTTFSGN
Subjt:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGN

Query:  PFSCSSSETSQMLMEWIMSQS
        PFS +SSETSQM+ME IMSQS
Subjt:  PFSCSSSETSQMLMEWIMSQS

A0A5D3E4D7 VAN3-binding protein isoform X12.4e-4582.64Show/hide
Query:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGN
        MDKTATEPWR+EP    P P SS+VYRP DTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHP +GN L+A V  GGGGVILEDLTGEL+EGTTFSGN
Subjt:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGN

Query:  PFSCSSSETSQMLMEWIMSQS
        PFS +SSETSQM+ME IMSQS
Subjt:  PFSCSSSETSQMLMEWIMSQS

A0A6J1H4Q0 VAN3-binding protein-like5.4e-4583.47Show/hide
Query:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGN
        MDKTAT PWR EPPP+L    SS+VYRP DTPLEPMEFLSRSWSVSALEVSKALAPPR TLSKHP AGN +VAAV GGGG VILEDLT ELEEGTTFSGN
Subjt:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGN

Query:  PFSCSSSETSQMLMEWIMSQS
        PFS +SSETSQM+ME IMSQS
Subjt:  PFSCSSSETSQMLMEWIMSQS

A0A6J1KWL4 VAN3-binding protein-like5.4e-4583.47Show/hide
Query:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGN
        MDKTAT PWR EPPP+L    SS+VYRP DTPLEPMEFLSRSWSVSALEVSKALAPPR TLSKHP AGN +VAAV GGGG VILEDLT ELEEGTTFSGN
Subjt:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGN

Query:  PFSCSSSETSQMLMEWIMSQS
        PFS +SSETSQM+ME IMSQS
Subjt:  PFSCSSSETSQMLMEWIMSQS

SwissProt top hitse value%identityAlignment
Q8W4K5 VAN3-binding protein1.6e-0641.84Show/hide
Query:  DTPLEPMEFLSRSWSVSALEVSKAL--APPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELE----EGTTFSGNPFSCSSSETSQMLMEWIMSQS
        ++P  PMEFLSRSWSVSALEVS+AL  A      ++ P + N  +            E L  E E    E +T   + FS ++S TSQ+++E IMSQS
Subjt:  DTPLEPMEFLSRSWSVSALEVSKAL--APPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELE----EGTTFSGNPFSCSSSETSQMLMEWIMSQS

Arabidopsis top hitse value%identityAlignment
AT3G22810.1 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region5.6e-1850.47Show/hide
Query:  PLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGNPFSCSSSETSQMLM
        P+  P  S  V+RP +TPLEPMEFLSRSWSVSA EVSKAL P +  LSK  I    ++       G         E E+ +  SGNPFS + SETSQM+M
Subjt:  PLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGNPFSCSSSETSQMLM

Query:  EWIMSQS
        + I+SQS
Subjt:  EWIMSQS

AT3G63300.1 FORKED 11.2e-0741.84Show/hide
Query:  DTPLEPMEFLSRSWSVSALEVSKAL--APPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELE----EGTTFSGNPFSCSSSETSQMLMEWIMSQS
        ++P  PMEFLSRSWSVSALEVS+AL  A      ++ P + N  +            E L  E E    E +T   + FS ++S TSQ+++E IMSQS
Subjt:  DTPLEPMEFLSRSWSVSALEVSKAL--APPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELE----EGTTFSGNPFSCSSSETSQMLMEWIMSQS

AT4G14740.1 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region1.4e-1645.16Show/hide
Query:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAP--PRLTLSK-HPIAGNALVAAVTGGGGGVILEDLTGELEEGTTF
        M+K     WR +P           VYRP +TPLEPMEFL+RSWSVSALEVSKAL P  P++ LSK         +++V  G          G+ E+    
Subjt:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAP--PRLTLSK-HPIAGNALVAAVTGGGGGVILEDLTGELEEGTTF

Query:  SGNPFSCSSSETSQMLMEWIMSQS
        +GNPFS + SETSQM+M+ I+S S
Subjt:  SGNPFSCSSSETSQMLMEWIMSQS

AT4G14740.2 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region1.4e-1645.16Show/hide
Query:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAP--PRLTLSK-HPIAGNALVAAVTGGGGGVILEDLTGELEEGTTF
        M+K     WR +P           VYRP +TPLEPMEFL+RSWSVSALEVSKAL P  P++ LSK         +++V  G          G+ E+    
Subjt:  MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAP--PRLTLSK-HPIAGNALVAAVTGGGGGVILEDLTGELEEGTTF

Query:  SGNPFSCSSSETSQMLMEWIMSQS
        +GNPFS + SETSQM+M+ I+S S
Subjt:  SGNPFSCSSSETSQMLMEWIMSQS

AT5G43870.1 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region2.5e-1041.12Show/hide
Query:  SSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALA-------PPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGNPFSCSSSETSQMLM
        S+  ++P +TPL+ MEFLSR+WS SA EVS+A+        PP++  S+           +  G   V    L  E EE     GN FS +SSETS M+M
Subjt:  SSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALA-------PPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGNPFSCSSSETSQMLM

Query:  EWIMSQS
        E IM+QS
Subjt:  EWIMSQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAAACAGCCACCGAGCCTTGGCGACTCGAGCCGCCTCCACTGCTGCCGCCGCCTCATTCCTCCTCCGTCTACCGCCCTCTGGACACCCCATTAGAGCCCATGGA
GTTCCTCTCCCGCTCTTGGAGCGTCTCAGCTCTAGAGGTCTCCAAAGCCCTCGCCCCTCCTCGTTTGACCCTTTCTAAGCACCCCATCGCCGGAAATGCCCTCGTTGCTG
CTGTCACCGGCGGCGGTGGCGGCGTCATTTTGGAGGATTTGACCGGTGAACTCGAAGAGGGTACCACTTTTTCTGGAAATCCATTTTCGTGTTCTTCCTCTGAAACTTCG
CAGATGTTGATGGAGTGGATTATGTCACAGTCGTATTGGGATGAATTAGAGCATTTGAAAGATGATCGAGTGTTCGGAACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAAACAGCCACCGAGCCTTGGCGACTCGAGCCGCCTCCACTGCTGCCGCCGCCTCATTCCTCCTCCGTCTACCGCCCTCTGGACACCCCATTAGAGCCCATGGA
GTTCCTCTCCCGCTCTTGGAGCGTCTCAGCTCTAGAGGTCTCCAAAGCCCTCGCCCCTCCTCGTTTGACCCTTTCTAAGCACCCCATCGCCGGAAATGCCCTCGTTGCTG
CTGTCACCGGCGGCGGTGGCGGCGTCATTTTGGAGGATTTGACCGGTGAACTCGAAGAGGGTACCACTTTTTCTGGAAATCCATTTTCGTGTTCTTCCTCTGAAACTTCG
CAGATGTTGATGGAGTGGATTATGTCACAGTCGTATTGGGATGAATTAGAGCATTTGAAAGATGATCGAGTGTTCGGAACATAA
Protein sequenceShow/hide protein sequence
MDKTATEPWRLEPPPLLPPPHSSSVYRPLDTPLEPMEFLSRSWSVSALEVSKALAPPRLTLSKHPIAGNALVAAVTGGGGGVILEDLTGELEEGTTFSGNPFSCSSSETS
QMLMEWIMSQSYWDELEHLKDDRVFGT