; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg021868 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021868
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationscaffold2:12594737..12600295
RNA-Seq ExpressionSpg021868
SyntenySpg021868
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139033.1 nuclear transcription factor Y subunit A-1 [Cucumis sativus]2.6e-13392.25Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQL+S  NGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD Q
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS LPAMHGECL QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PH RMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EA+GKE HSD VN+S Y LNDGSEQQNGSSLTNKASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE

XP_008450422.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo]8.8e-13492.25Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS LPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PH RMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EADGKE HSD V++SGY LNDGSEQQ GSSL NKASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE

XP_008450423.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo]8.8e-13492.25Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS LPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PH RMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EADGKE HSD V++SGY LNDGSEQQ GSSL NKASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE

XP_022154358.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia]9.4e-13692.62Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQLESDPNGAPSTS+YYEPWWRGIGYNPIPLPVVGGN SSSTSLEFPNGGSESNDGQSVSNND+NDEEDDV+KEVQATGSPHSAGSYR DAQ
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS LPAMHGEC TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPH RMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE
        KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKK+EA+  EMHSD  N+SGY LNDGSEQ+NGSS  NKAS+
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE

XP_022968054.1 nuclear transcription factor Y subunit A-1 isoform X1 [Cucurbita maxima]1.7e-13291.51Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQ ESDPNG PSTSIYYEPWWRGIGYNPIPLPVVGGN+SSSTSLEFPNGGSESNDGQSVSNNDVNDEE DVSKEVQATGSPHSAG+YRQ AQ
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS  P MHGECL QSTQLELVGHSIACASNPYQDP YGGMMAFYGHQPLGYP VG PH RMPLPIEIAQDPV VNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRRTRGSGGRF KKNEADGKEMHSD VN++G HLNDGS+QQNGSSLTN ASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE

TrEMBL top hitse value%identityAlignment
A0A0A0M2S3 Nuclear transcription factor Y subunit1.2e-13392.25Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQL+S  NGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD Q
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS LPAMHGECL QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PH RMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EA+GKE HSD VN+S Y LNDGSEQQNGSSLTNKASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE

A0A1S3BP85 Nuclear transcription factor Y subunit4.3e-13492.25Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS LPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PH RMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EADGKE HSD V++SGY LNDGSEQQ GSSL NKASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE

A0A1S3BPV3 Nuclear transcription factor Y subunit4.3e-13492.25Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS LPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PH RMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EADGKE HSD V++SGY LNDGSEQQ GSSL NKASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE

A0A5D3D5Q2 Nuclear transcription factor Y subunit4.3e-13492.25Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS LPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PH RMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EADGKE HSD V++SGY LNDGSEQQ GSSL NKASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE

A0A6J1DK42 Nuclear transcription factor Y subunit4.5e-13692.62Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQLESDPNGAPSTS+YYEPWWRGIGYNPIPLPVVGGN SSSTSLEFPNGGSESNDGQSVSNND+NDEEDDV+KEVQATGSPHSAGSYR DAQ
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS LPAMHGEC TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPH RMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE
        KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKK+EA+  EMHSD  N+SGY LNDGSEQ+NGSS  NKAS+
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-71.0e-2341.67Show/hide
Query:  GSYRQDAQKMQHVSSALP-AMHGECLTQSTQLELVG--HSIACASNPYQDPYYGGMMAFYGHQPLG--YPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGI
        GS+ +  Q+  H    +P A + E +  S      G  +S+A    PY DPYY  + A       G    ++G     +PLP +  ++PVFVNAKQY GI
Subjt:  GSYRQDAQKMQHVSSALP-AMHGECLTQSTQLELVG--HSIACASNPYQDPYYGGMMAFYGHQPLG--YPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGI

Query:  LRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTN
        LRRRQ+RA+ E++ K+IK+RKPYLHESRH HAIRR RG GGRF    + D  E H D+ ++   +L+ G      SS T+
Subjt:  LRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTN

Q8VY64 Nuclear transcription factor Y subunit A-47.0e-2551.54Show/hide
Query:  TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYP-----MVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLH
        T S   E + H +     PY DPYY  + A   + P  YP     ++G   P +PL  +  ++PVFVNAKQY GILRRRQ+RAK EA  + IKA+KPY+H
Subjt:  TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYP-----MVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLH

Query:  ESRHQHAIRRTRGSGGRF--AKKNEADGKE
        ESRH HAIRR RG GGRF  AKK   D KE
Subjt:  ESRHQHAIRRTRGSGGRF--AKKNEADGKE

Q93ZH2 Nuclear transcription factor Y subunit A-31.4e-2035.95Show/hide
Query:  IGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSALPAMHGECLTQ-------STQLE
        I +  +P   V     S+ SL       +S  G   +   ++ ++ D S   Q+TG  ++  +   D    + +S    A  G  +TQ         Q  
Subjt:  IGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSALPAMHGECLTQ-------STQLE

Query:  LVG----HSIACASN---PYQDPYYGGMMA--FYGHQPLGYP-MVGAPHPRMPLPIEIAQ-DPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLHE
        + G    H     +N    Y DP+YGG++A  +    P   P MV     R+PLP E+ + DPVFVNAKQY  I+RRRQ RAK EA+ KLI+ARKPYLHE
Subjt:  LVG----HSIACASN---PYQDPYYGGMMA--FYGHQPLGYP-MVGAPHPRMPLPIEIAQ-DPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLHE

Query:  SRHQHAIRRTRGSGGRF-------AKKNEADGKEMHSDNVNQ
        SRH HA++R RGSGGRF        +  +A  +E   D + Q
Subjt:  SRHQHAIRRTRGSGGRF-------AKKNEADGKEMHSDNVNQ

Q945M9 Nuclear transcription factor Y subunit A-94.5e-4848.58Show/hide
Query:  MQSKSET-NNQLESDPNGAPSTSI-YYEPWWR-GIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ
        M SKS++  N+++S+ +G  S+SI    PW R     N       G  +S S +L       ESN  +S SN D     + V+KE Q T SP SAG Y  
Subjt:  MQSKSET-NNQLESDPNGAPSTSI-YYEPWWR-GIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ

Query:  DAQKMQHVSSALPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARA
          Q+  H     P  H          +LVGH++  A SNPYQDPYY G+M  YGH PLG+ P  G PH RMPLP E+AQ+PVFVNAKQYQ ILRRRQARA
Subjt:  DAQKMQHVSSALPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEAD-----GKEMHSDNVNQSGYHLN-DGSEQQNGSSLTNKASE
        KAE EKKLIK+RKPYLHESRHQHA+RR RG+GGRFAKK   +      +E  + +V QS    N D  E  NG   T +  E
Subjt:  KAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEAD-----GKEMHSDNVNQSGYHLN-DGSEQQNGSSLTNKASE

Q9LXV5 Nuclear transcription factor Y subunit A-12.8e-5047.91Show/hide
Query:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  AQKMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLN-DGSEQ
        E E+K+I+ RKPYLHESRH+HA+RR R SGGRFAKK+E +  E       + G   N  GSEQ
Subjt:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLN-DGSEQ

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A93.2e-4948.58Show/hide
Query:  MQSKSET-NNQLESDPNGAPSTSI-YYEPWWR-GIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ
        M SKS++  N+++S+ +G  S+SI    PW R     N       G  +S S +L       ESN  +S SN D     + V+KE Q T SP SAG Y  
Subjt:  MQSKSET-NNQLESDPNGAPSTSI-YYEPWWR-GIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ

Query:  DAQKMQHVSSALPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARA
          Q+  H     P  H          +LVGH++  A SNPYQDPYY G+M  YGH PLG+ P  G PH RMPLP E+AQ+PVFVNAKQYQ ILRRRQARA
Subjt:  DAQKMQHVSSALPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEAD-----GKEMHSDNVNQSGYHLN-DGSEQQNGSSLTNKASE
        KAE EKKLIK+RKPYLHESRHQHA+RR RG+GGRFAKK   +      +E  + +V QS    N D  E  NG   T +  E
Subjt:  KAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEAD-----GKEMHSDNVNQSGYHLN-DGSEQQNGSSLTNKASE

AT5G12840.1 nuclear factor Y, subunit A12.0e-5147.91Show/hide
Query:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  AQKMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLN-DGSEQ
        E E+K+I+ RKPYLHESRH+HA+RR R SGGRFAKK+E +  E       + G   N  GSEQ
Subjt:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLN-DGSEQ

AT5G12840.2 nuclear factor Y, subunit A11.5e-5149.43Show/hide
Query:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA      A S R D
Subjt:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQHVSSALPA--MHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARA
           M+    AL    MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARA
Subjt:  AQKMQHVSSALPA--MHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLN-DGSEQ
        KAE E+K+I+ RKPYLHESRH+HA+RR R SGGRFAKK+E +  E       + G   N  GSEQ
Subjt:  KAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLN-DGSEQ

AT5G12840.3 nuclear factor Y, subunit A12.0e-5147.91Show/hide
Query:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  AQKMQHVSSALPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLN-DGSEQ
        E E+K+I+ RKPYLHESRH+HA+RR R SGGRFAKK+E +  E       + G   N  GSEQ
Subjt:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLN-DGSEQ

AT5G12840.4 nuclear factor Y, subunit A11.5e-5149.43Show/hide
Query:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA      A S R D
Subjt:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQHVSSALPA--MHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARA
           M+    AL    MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARA
Subjt:  AQKMQHVSSALPA--MHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLN-DGSEQ
        KAE E+K+I+ RKPYLHESRH+HA+RR R SGGRFAKK+E +  E       + G   N  GSEQ
Subjt:  KAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLN-DGSEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCAAAATCTGAAACCAATAATCAGCTTGAATCTGATCCAAATGGTGCTCCATCCACGAGTATCTATTATGAACCCTGGTGGCGTGGTATTGGGTACAATCCTAT
TCCATTACCTGTGGTAGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCAAATGACGGCCAGTCTGTGTCTAATAACGACGTAAATG
ACGAAGAAGATGATGTTTCCAAAGAAGTGCAAGCTACTGGATCTCCACATTCCGCTGGAAGCTACAGACAGGATGCTCAGAAGATGCAGCATGTTTCATCCGCTTTACCA
GCTATGCACGGTGAATGTCTGACACAGTCTACACAACTCGAACTTGTTGGTCACTCTATTGCATGTGCATCAAATCCATATCAGGATCCATATTATGGAGGAATGATGGC
TTTCTATGGCCATCAGCCATTGGGCTATCCTATGGTTGGAGCGCCACATCCTAGAATGCCGTTGCCCATTGAGATAGCACAGGACCCCGTTTTCGTGAATGCGAAGCAGT
ACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAGTTGATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACACCAGCACGCCATA
AGAAGGACGAGGGGTAGTGGAGGGCGTTTCGCCAAGAAAAACGAAGCTGATGGAAAGGAGATGCATTCTGATAACGTAAACCAGAGTGGTTACCACCTAAACGATGGTTC
TGAACAGCAGAATGGAAGCTCCTTGACGAACAAGGCCTCTGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCAAAATCTGAAACCAATAATCAGCTTGAATCTGATCCAAATGGTGCTCCATCCACGAGTATCTATTATGAACCCTGGTGGCGTGGTATTGGGTACAATCCTAT
TCCATTACCTGTGGTAGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCAAATGACGGCCAGTCTGTGTCTAATAACGACGTAAATG
ACGAAGAAGATGATGTTTCCAAAGAAGTGCAAGCTACTGGATCTCCACATTCCGCTGGAAGCTACAGACAGGATGCTCAGAAGATGCAGCATGTTTCATCCGCTTTACCA
GCTATGCACGGTGAATGTCTGACACAGTCTACACAACTCGAACTTGTTGGTCACTCTATTGCATGTGCATCAAATCCATATCAGGATCCATATTATGGAGGAATGATGGC
TTTCTATGGCCATCAGCCATTGGGCTATCCTATGGTTGGAGCGCCACATCCTAGAATGCCGTTGCCCATTGAGATAGCACAGGACCCCGTTTTCGTGAATGCGAAGCAGT
ACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAGTTGATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACACCAGCACGCCATA
AGAAGGACGAGGGGTAGTGGAGGGCGTTTCGCCAAGAAAAACGAAGCTGATGGAAAGGAGATGCATTCTGATAACGTAAACCAGAGTGGTTACCACCTAAACGATGGTTC
TGAACAGCAGAATGGAAGCTCCTTGACGAACAAGGCCTCTGAGTAG
Protein sequenceShow/hide protein sequence
MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSALP
AMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHPRMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAI
RRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE