; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg021957 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg021957
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionD-ribose-binding periplasmic protein
Genome locationscaffold2:5423593..5424936
RNA-Seq ExpressionSpg021957
SyntenySpg021957
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587486.1 hypothetical protein SDJN03_16051, partial [Cucurbita argyrosperma subsp. sororia]6.3e-6382.49Show/hide
Query:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETS----------------NETSSNSVRLT
        MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+NNNETSKVEKKENE S                NE SSNSVRLT
Subjt:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETS----------------NETSSNSVRLT

Query:  RIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSD---AAAVGRSVSEDPVQ
        RIKLLRPAD LVLGQVYRLITS+EVM GLSAKKQAKVKQSQLEAAEK  RRKER ARGSD   AAA GRSVSEDP Q
Subjt:  RIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSD---AAAVGRSVSEDPVQ

XP_022933525.1 uncharacterized protein LOC111440926 isoform X1 [Cucurbita moschata]3.7e-6382.49Show/hide
Query:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETS----------------NETSSNSVRLT
        MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+NNNETSKVEKKENE S                NE SSNSVRLT
Subjt:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETS----------------NETSSNSVRLT

Query:  RIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSD---AAAVGRSVSEDPVQ
        RIKLLRPAD LVLGQVYRLITS+EVM GLSAKKQAKVKQSQLEAAEK  RRKER ARGSD   AAA GRSVSEDP Q
Subjt:  RIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSD---AAAVGRSVSEDPVQ

XP_022933526.1 uncharacterized protein LOC111440926 isoform X2 [Cucurbita moschata]2.6e-6487.43Show/hide
Query:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETS------NETSSNSVRLTRIKLLRPADM
        MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+NNNETSKVEKKENE S      NE SSNSVRLTRIKLLRPAD 
Subjt:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETS------NETSSNSVRLTRIKLLRPADM

Query:  LVLGQVYRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSD---AAAVGRSVSEDPVQ
        LVLGQVYRLITS+EVM GLSAKKQAKVKQSQLEAAEK  RRKER ARGSD   AAA GRSVSEDP Q
Subjt:  LVLGQVYRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSD---AAAVGRSVSEDPVQ

XP_022965769.1 uncharacterized protein LOC111465553 isoform X2 [Cucurbita maxima]2.8e-6386.23Show/hide
Query:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENET------SNETSSNSVRLTRIKLLRPADM
        MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+NNNETSKVEKKENE        NE SSNSVRLTRIKLLRPAD 
Subjt:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENET------SNETSSNSVRLTRIKLLRPADM

Query:  LVLGQVYRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSDA---AAVGRSVSEDPVQ
        LVLGQVYRLITS+EVM GLSAKKQAKVKQSQLEAAEK  RRKER ARGSD+   AA GRSVSEDP Q
Subjt:  LVLGQVYRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSDA---AAVGRSVSEDPVQ

XP_023529445.1 uncharacterized protein LOC111792303 [Cucurbita pepo subsp. pepo]1.4e-6281.92Show/hide
Query:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETS----------------NETSSNSVRLT
        MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+NNNETSKVEKKENE S                NE SSNSVRLT
Subjt:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETS----------------NETSSNSVRLT

Query:  RIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSDAA---AVGRSVSEDPVQ
        RIKLLRPAD LVLGQVYRLITS+EVM GLSAKKQAKVKQSQLEAAEK  RRKER ARGSD+A   A GRSVSEDP Q
Subjt:  RIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSDAA---AVGRSVSEDPVQ

TrEMBL top hitse value%identityAlignment
A0A0A0LRI4 Uncharacterized protein3.4e-6284.57Show/hide
Query:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETSNETSSNSVRLTRIKLLRPADMLVLGQV
        MGNCQAIDAATLVIQHPSGK DKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNN          N+TSNETSSNSVRLTRIKLLRPADMLVLGQV
Subjt:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETSNETSSNSVRLTRIKLLRPADMLVLGQV

Query:  YRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSD--AAAVGRSVSEDPVQVN
        YRLIT+QEVM+GLSAKKQAKVKQSQLEAA+KP RRK+RT R SD  AAA GRSVSED +Q N
Subjt:  YRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSD--AAAVGRSVSEDPVQVN

A0A6J1EZA8 uncharacterized protein LOC111440926 isoform X21.2e-6487.43Show/hide
Query:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETS------NETSSNSVRLTRIKLLRPADM
        MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+NNNETSKVEKKENE S      NE SSNSVRLTRIKLLRPAD 
Subjt:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETS------NETSSNSVRLTRIKLLRPADM

Query:  LVLGQVYRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSD---AAAVGRSVSEDPVQ
        LVLGQVYRLITS+EVM GLSAKKQAKVKQSQLEAAEK  RRKER ARGSD   AAA GRSVSEDP Q
Subjt:  LVLGQVYRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSD---AAAVGRSVSEDPVQ

A0A6J1F544 uncharacterized protein LOC111440926 isoform X11.8e-6382.49Show/hide
Query:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETS----------------NETSSNSVRLT
        MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+NNNETSKVEKKENE S                NE SSNSVRLT
Subjt:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETS----------------NETSSNSVRLT

Query:  RIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSD---AAAVGRSVSEDPVQ
        RIKLLRPAD LVLGQVYRLITS+EVM GLSAKKQAKVKQSQLEAAEK  RRKER ARGSD   AAA GRSVSEDP Q
Subjt:  RIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSD---AAAVGRSVSEDPVQ

A0A6J1HMJ8 uncharacterized protein LOC111465553 isoform X12.0e-6281.36Show/hide
Query:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENET----------------SNETSSNSVRLT
        MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+NNNETSKVEKKENE                  NE SSNSVRLT
Subjt:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENET----------------SNETSSNSVRLT

Query:  RIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSDA---AAVGRSVSEDPVQ
        RIKLLRPAD LVLGQVYRLITS+EVM GLSAKKQAKVKQSQLEAAEK  RRKER ARGSD+   AA GRSVSEDP Q
Subjt:  RIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSDA---AAVGRSVSEDPVQ

A0A6J1HRW5 uncharacterized protein LOC111465553 isoform X21.4e-6386.23Show/hide
Query:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENET------SNETSSNSVRLTRIKLLRPADM
        MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+NNNETSKVEKKENE        NE SSNSVRLTRIKLLRPAD 
Subjt:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENET------SNETSSNSVRLTRIKLLRPADM

Query:  LVLGQVYRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSDA---AAVGRSVSEDPVQ
        LVLGQVYRLITS+EVM GLSAKKQAKVKQSQLEAAEK  RRKER ARGSD+   AA GRSVSEDP Q
Subjt:  LVLGQVYRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSDA---AAVGRSVSEDPVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10530.1 unknown protein1.5e-2243.87Show/hide
Query:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETSNETSSNSVRLTRIKLLRPADMLVLGQV
        MGNCQA++AA LV+QHP G +D+ Y  V+  E+M M PGHYV+L+I     +  E  N   T K + K+          +VR TR++LLRP + LVLG  
Subjt:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETSNETSSNSVRLTRIKLLRPADMLVLGQV

Query:  YRLITSQEVMRGLSAKKQAKVKQSQLE------------AAEKPQRRKERTARGS
        YRLITSQEVM+ L  KK AK K+ Q+E              EK Q ++ R  R S
Subjt:  YRLITSQEVMRGLSAKKQAKVKQSQLE------------AAEKPQRRKERTARGS

AT1G60010.1 unknown protein2.9e-2650Show/hide
Query:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETSNETSSNSVRLTRIKLLRPADMLVLGQV
        MGNCQA+DAA LV+QHP GK+D+ Y PV+  EIM+M PGHYV+L+I      P ++     T+  +K E +         VR TR+KLLRP + LVLG  
Subjt:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETSNETSSNSVRLTRIKLLRPADMLVLGQV

Query:  YRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQR
        YRLITSQEVM+ L AKK AK K+ Q E +++ ++
Subjt:  YRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQR

AT5G50090.1 unknown protein2.9e-2651.15Show/hide
Query:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETSNETSSNSVRLTRIKLLRPADMLVLGQV
        MGNCQA+D A +VIQHP+GK +KL  PV+A  +MKMNPGH V+LLISTT  +   S +                      +RLTRIKLLRP D LVLG V
Subjt:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETSNETSSNSVRLTRIKLLRPADMLVLGQV

Query:  YRLITSQEVMRGLSAKKQAKVKQSQLEAAEK
        YRLIT++EVM+GL AKK +K+K+    + +K
Subjt:  YRLITSQEVMRGLSAKKQAKVKQSQLEAAEK

AT5G50090.2 unknown protein2.9e-2651.15Show/hide
Query:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETSNETSSNSVRLTRIKLLRPADMLVLGQV
        MGNCQA+D A +VIQHP+GK +KL  PV+A  +MKMNPGH V+LLISTT  +   S +                      +RLTRIKLLRP D LVLG V
Subjt:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETSNETSSNSVRLTRIKLLRPADMLVLGQV

Query:  YRLITSQEVMRGLSAKKQAKVKQSQLEAAEK
        YRLIT++EVM+GL AKK +K+K+    + +K
Subjt:  YRLITSQEVMRGLSAKKQAKVKQSQLEAAEK

AT5G62900.1 unknown protein6.4e-2141.78Show/hide
Query:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETSNETSSNSVRLTRIKLLRPADMLVLGQV
        MGNCQA +AAT VIQ P GK  + Y  V A E++K +PGH+VALL+S+ +                             S+R+TRIKLLRP+D L+LG V
Subjt:  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETSNETSSNSVRLTRIKLLRPADMLVLGQV

Query:  YRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSDAA
        YRLI+S+EVM+G+ AKK  K+K+   E +   +     T R   A+
Subjt:  YRLITSQEVMRGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSDAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTGCCAAGCCATTGATGCAGCAACACTTGTGATACAACACCCAAGTGGGAAAGTAGACAAATTGTATTGGCCTGTGACTGCTAGAGAGATCATGAAGATGAA
TCCTGGTCACTACGTTGCTCTTCTCATCTCCACCACCATGTTTACACCAAATGAAAGCAATAACAACAATGAAACCAGCAAGGTTGAGAAAAAAGAGAATGAAACCAGCA
ATGAAACCAGTAGTAATTCGGTTCGTTTAACTCGAATCAAGCTTCTCCGCCCAGCTGACATGCTTGTTCTTGGCCAAGTTTACAGGCTCATCACTTCTCAAGAGGTTATG
AGAGGTTTATCAGCAAAGAAACAAGCAAAGGTTAAACAAAGCCAGTTAGAAGCAGCAGAGAAGCCACAGAGGAGGAAAGAACGTACAGCCAGGGGTTCAGATGCAGCAGC
AGTTGGAAGATCTGTCTCTGAAGACCCTGTTCAGGTGAATTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATTGCCAAGCCATTGATGCAGCAACACTTGTGATACAACACCCAAGTGGGAAAGTAGACAAATTGTATTGGCCTGTGACTGCTAGAGAGATCATGAAGATGAA
TCCTGGTCACTACGTTGCTCTTCTCATCTCCACCACCATGTTTACACCAAATGAAAGCAATAACAACAATGAAACCAGCAAGGTTGAGAAAAAAGAGAATGAAACCAGCA
ATGAAACCAGTAGTAATTCGGTTCGTTTAACTCGAATCAAGCTTCTCCGCCCAGCTGACATGCTTGTTCTTGGCCAAGTTTACAGGCTCATCACTTCTCAAGAGGTTATG
AGAGGTTTATCAGCAAAGAAACAAGCAAAGGTTAAACAAAGCCAGTTAGAAGCAGCAGAGAAGCCACAGAGGAGGAAAGAACGTACAGCCAGGGGTTCAGATGCAGCAGC
AGTTGGAAGATCTGTCTCTGAAGACCCTGTTCAGGTGAATTTTTAA
Protein sequenceShow/hide protein sequence
MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNNETSKVEKKENETSNETSSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVM
RGLSAKKQAKVKQSQLEAAEKPQRRKERTARGSDAAAVGRSVSEDPVQVNF