; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022006 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022006
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionATP-dependent RNA helicase DDX11-like protein
Genome locationscaffold2:7384062..7384739
RNA-Seq ExpressionSpg022006
SyntenySpg022006
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587958.1 hypothetical protein SDJN03_16523, partial [Cucurbita argyrosperma subsp. sororia]2.4e-6876.8Show/hide
Query:  MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKA-APPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKNQQSIRI
        M L  SISTTKKFFKKTLCNFKSFFSN+YHRLPKA  PPF AGP+M KD          +V+NGSF K SNG  N+VHFSKTID+TQM+RVEKN+QSI+I
Subjt:  MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKA-APPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKNQQSIRI

Query:  RATHQRKTQENCESSSKNST-LNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQN
         ATHQRKTQEN ES SK S+ L +YDERR+CLVAKKIKELEKLDARNVDH+LDIEE+LHYYSRLTCPTYLEIVD FFM++FAEFCSN SSSQQN
Subjt:  RATHQRKTQENCESSSKNST-LNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQN

XP_022933508.1 uncharacterized protein LOC111440909 [Cucurbita moschata]2.0e-6776.29Show/hide
Query:  MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKA-APPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKNQQSIRI
        M L  SISTTKKFF+KTLCNFKSFFSN+YHRLPKA  PPF AGP+M KD          EV+NGSF K SNG  N+VHFSKTID+TQM+RVEKN+QSI+I
Subjt:  MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKA-APPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKNQQSIRI

Query:  RATHQRKTQENCESSSKNST-LNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQN
         ATHQRKTQEN ES SK S+ L +YDERR+CLVAKKIKELEKLDARNV H+LDIEE+LHYYSRLTCPTYLEIVD FFM++FAEFCSN SSSQQN
Subjt:  RATHQRKTQENCESSSKNST-LNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQN

XP_022960595.1 uncharacterized protein LOC111461329 [Cucurbita moschata]5.3e-6867.56Show/hide
Query:  MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKNQQSIRIR
        M+LR+SI+ TKKFF KTLCNFKSFFSN+Y RLPKA PPF+ G +MDKDS              SFMKNSNG  N+V FSKT+DETQM++VEKN+ SI+I 
Subjt:  MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKNQQSIRIR

Query:  ATHQRKTQENCESSSKNSTLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQNCTVKSRRI
         THQRKTQEN         L +YDERRMCLVAKK+KELEKLDAR+VDH LDIEE+LHYYSRL+CPTYLEIVDKFFM+IFAEFC+N SS Q N       I
Subjt:  ATHQRKTQENCESSSKNSTLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQNCTVKSRRI

Query:  GSE-SVGLERRKSRLGNLEPSSSDF
        G E SVGL RRKSRLG +E SSS F
Subjt:  GSE-SVGLERRKSRLGNLEPSSSDF

XP_022973644.1 uncharacterized protein LOC111472233 [Cucurbita maxima]3.7e-6976.68Show/hide
Query:  MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKNQQSIRIR
        M L  SISTTKKFFKKT+CNFKSFFSN+YHRLPKAAPPF AGP+M KD          EV+NGSF K SNG  N+VHFSKTID+TQM+RVEKN+QSI+I 
Subjt:  MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKNQQSIRIR

Query:  ATHQRKTQENCESSSKNS-TLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQN
        ATHQRK+QEN ES SK S  L +YDERR+CLVAKKIKELEKLDARNVDH+LDIEE+LHYYSRLTCPTYLEIVD FFM++FAEFCSN SSSQ N
Subjt:  ATHQRKTQENCESSSKNS-TLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQN

XP_023515883.1 uncharacterized protein LOC111779922 [Cucurbita pepo subsp. pepo]1.4e-6868.75Show/hide
Query:  MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKNQQSIRIR
        MLLR+SIS TKKFF KTLCN KSFFSN+Y RLPKAAPPF+ G +MDKDS              SFMKNSNG  N+VHFSKTIDETQM++VEKN+ SI+I 
Subjt:  MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKNQQSIRIR

Query:  ATHQRKTQENCESSSKNSTLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQNCTVKSRRI
         THQRKTQEN         L +YDERRMC VAKK+KELEKLDAR+VDH LDIEE+LHYYSRL+CPTYLEIVDKFFM+IFAEFC+N SS Q N       I
Subjt:  ATHQRKTQENCESSSKNSTLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQNCTVKSRRI

Query:  GSE-SVGLERRKSRLGNLEPSSSD
        G E S GL RRKSRLGN+E SSS+
Subjt:  GSE-SVGLERRKSRLGNLEPSSSD

TrEMBL top hitse value%identityAlignment
A0A6J1CV44 uncharacterized protein LOC1110145447.0e-6665.79Show/hide
Query:  MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQME--RVEKNQQSI-
        MLLR+SIS TKKFFKKT+CNFKSFFS SYHRLPK  PPFAAGP M+KDSTF FISSQKEV++G FMKN+   +N++HF   ++ETQME   V+K+  S+ 
Subjt:  MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQME--RVEKNQQSI-

Query:  RIRATHQRKTQENCESSSKNSTLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQNCTVKS
         I ATHQRK QEN +  S +  +   DERRMCLVAKKIKELEKLD+RNVDH LDIEE+LHYYSRLTCP YLEIVDKFF EIFAEF +N SSSQ   T+K 
Subjt:  RIRATHQRKTQENCESSSKNSTLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQNCTVKS

Query:  RRIGSESVGLERRKSRLGNLEPSSSDFF
        R I  +SVGL +R+         +SDFF
Subjt:  RRIGSESVGLERRKSRLGNLEPSSSDFF

A0A6J1F4Y2 uncharacterized protein LOC1114409099.8e-6876.29Show/hide
Query:  MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKA-APPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKNQQSIRI
        M L  SISTTKKFF+KTLCNFKSFFSN+YHRLPKA  PPF AGP+M KD          EV+NGSF K SNG  N+VHFSKTID+TQM+RVEKN+QSI+I
Subjt:  MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKA-APPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKNQQSIRI

Query:  RATHQRKTQENCESSSKNST-LNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQN
         ATHQRKTQEN ES SK S+ L +YDERR+CLVAKKIKELEKLDARNV H+LDIEE+LHYYSRLTCPTYLEIVD FFM++FAEFCSN SSSQQN
Subjt:  RATHQRKTQENCESSSKNST-LNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQN

A0A6J1H9I9 uncharacterized protein LOC1114613292.6e-6867.56Show/hide
Query:  MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKNQQSIRIR
        M+LR+SI+ TKKFF KTLCNFKSFFSN+Y RLPKA PPF+ G +MDKDS              SFMKNSNG  N+V FSKT+DETQM++VEKN+ SI+I 
Subjt:  MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKNQQSIRIR

Query:  ATHQRKTQENCESSSKNSTLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQNCTVKSRRI
         THQRKTQEN         L +YDERRMCLVAKK+KELEKLDAR+VDH LDIEE+LHYYSRL+CPTYLEIVDKFFM+IFAEFC+N SS Q N       I
Subjt:  ATHQRKTQENCESSSKNSTLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQNCTVKSRRI

Query:  GSE-SVGLERRKSRLGNLEPSSSDF
        G E SVGL RRKSRLG +E SSS F
Subjt:  GSE-SVGLERRKSRLGNLEPSSSDF

A0A6J1IF62 uncharacterized protein LOC1114722331.8e-6976.68Show/hide
Query:  MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKNQQSIRIR
        M L  SISTTKKFFKKT+CNFKSFFSN+YHRLPKAAPPF AGP+M KD          EV+NGSF K SNG  N+VHFSKTID+TQM+RVEKN+QSI+I 
Subjt:  MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKNQQSIRIR

Query:  ATHQRKTQENCESSSKNS-TLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQN
        ATHQRK+QEN ES SK S  L +YDERR+CLVAKKIKELEKLDARNVDH+LDIEE+LHYYSRLTCPTYLEIVD FFM++FAEFCSN SSSQ N
Subjt:  ATHQRKTQENCESSSKNS-TLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQN

A0A6J1JFL9 uncharacterized protein LOC1114852924.7e-6266.06Show/hide
Query:  MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKNQQSIRIR
        M+LR+SIS+TKKFF KTLCNFKSFFSN+Y RLPK          MDKDS              SFMKNSNG  N+VHFSKTI ETQM++VEKN+ SI+I 
Subjt:  MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKNQQSIRIR

Query:  ATHQRKTQENCESSSKNSTLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQNCTVKSRRI
        ATHQRKTQEN         L  YDERRMCLVAKK+KELEKLDAR+VDH LDIEE+LHYYSRL+CPTYL+IVDKFFM+IFAEFC+N SS Q N       I
Subjt:  ATHQRKTQENCESSSKNSTLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQNCTVKSRRI

Query:  GSE-SVGLERRKSRLGNLEPS
        G + SVGL RRKSRLGN+E S
Subjt:  GSE-SVGLERRKSRLGNLEPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15260.1 unknown protein1.3e-0835.87Show/hide
Query:  THQRKTQENCESSSKNSTLNQYD-ERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQN
        THQ+      +   K       D ++R   +A+K+K+L  +D R+VDH LD+ E L  YS +  P YL+IVD FF +++ EF    +S++ N
Subjt:  THQRKTQENCESSSKNSTLNQYD-ERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQN

AT3G16070.1 unknown protein3.5e-0926.16Show/hide
Query:  TKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFS-KTIDETQMERVEKNQQSIRIRATHQRKTQ
        T  FF +TL + KS    +  +LP+    F+                       +F ++++   ++++ S   I E+ +E    N     ++  H+ + Q
Subjt:  TKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFS-KTIDETQMERVEKNQQSIRIRATHQRKTQ

Query:  ENCESSSKNSTLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFA
        E      K    + Y  R    + KKI E+   +  +++  LD+EE LHYYSR++ P YL IVDKFF ++++
Subjt:  ENCESSSKNSTLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFA

AT3G24535.1 unknown protein3.4e-1230.05Show/hide
Query:  MLLRSSISTTKKFFKKTLCNFKSFFSN--SYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKN-QQSI
        M+LRSSIS T+K F+KT+ NFKSFF N  +YH+LPK                                 N++   N+ H +  I  +    + K  Q   
Subjt:  MLLRSSISTTKKFFKKTLCNFKSFFSN--SYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKN-QQSI

Query:  RIRATHQRKTQENCESSSKNSTLNQYDERRMCLVAKKIKELEKLDARNV----DHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNH
        +   T  + +        ++ TL  + + ++ LV  K+KE+EK+   ++     +  D+ E LH YSRL    YL++V+ FFME++++F S H
Subjt:  RIRATHQRKTQENCESSSKNSTLNQYDERRMCLVAKKIKELEKLDARNV----DHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCTACGATCCTCCATTTCCACCACCAAAAAATTCTTCAAAAAAACCTTATGTAACTTCAAATCTTTCTTCTCCAACAGCTACCACCGCCTGCCCAAGGCGGCGCC
GCCCTTCGCCGCCGGCCCCGACATGGACAAAGACTCAACCTTTCACTTCATTTCATCCCAAAAAGAGGTCAAAAATGGAAGCTTTATGAAGAACAGCAATGGTTTGGCTA
ATTCAGTCCATTTCTCGAAGACGATCGACGAGACCCAGATGGAAAGAGTCGAGAAAAATCAACAGAGCATCAGAATTCGAGCGACCCATCAAAGGAAAACGCAAGAAAAT
TGCGAATCCAGTTCGAAGAATTCTACTTTGAATCAGTACGACGAGAGGAGAATGTGTTTGGTTGCCAAGAAAATTAAAGAGTTGGAAAAACTAGACGCGAGAAATGTGGA
TCATACTTTGGATATTGAGGAGGTTCTTCATTACTACTCTCGTCTCACTTGTCCAACATATCTTGAAATCGTGGACAAATTCTTCATGGAGATTTTTGCTGAATTTTGTT
CTAATCATTCTTCTTCTCAACAAAATTGCACTGTAAAATCCAGGCGAATTGGGTCGGAATCGGTGGGTTTAGAGAGAAGAAAATCTCGTTTGGGAAATTTGGAGCCTTCG
TCCTCTGATTTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGCTACGATCCTCCATTTCCACCACCAAAAAATTCTTCAAAAAAACCTTATGTAACTTCAAATCTTTCTTCTCCAACAGCTACCACCGCCTGCCCAAGGCGGCGCC
GCCCTTCGCCGCCGGCCCCGACATGGACAAAGACTCAACCTTTCACTTCATTTCATCCCAAAAAGAGGTCAAAAATGGAAGCTTTATGAAGAACAGCAATGGTTTGGCTA
ATTCAGTCCATTTCTCGAAGACGATCGACGAGACCCAGATGGAAAGAGTCGAGAAAAATCAACAGAGCATCAGAATTCGAGCGACCCATCAAAGGAAAACGCAAGAAAAT
TGCGAATCCAGTTCGAAGAATTCTACTTTGAATCAGTACGACGAGAGGAGAATGTGTTTGGTTGCCAAGAAAATTAAAGAGTTGGAAAAACTAGACGCGAGAAATGTGGA
TCATACTTTGGATATTGAGGAGGTTCTTCATTACTACTCTCGTCTCACTTGTCCAACATATCTTGAAATCGTGGACAAATTCTTCATGGAGATTTTTGCTGAATTTTGTT
CTAATCATTCTTCTTCTCAACAAAATTGCACTGTAAAATCCAGGCGAATTGGGTCGGAATCGGTGGGTTTAGAGAGAAGAAAATCTCGTTTGGGAAATTTGGAGCCTTCG
TCCTCTGATTTCTTCTAG
Protein sequenceShow/hide protein sequence
MLLRSSISTTKKFFKKTLCNFKSFFSNSYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNGLANSVHFSKTIDETQMERVEKNQQSIRIRATHQRKTQEN
CESSSKNSTLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDKFFMEIFAEFCSNHSSSQQNCTVKSRRIGSESVGLERRKSRLGNLEPS
SSDFF