CuGenDBv2

Gene ID	Spg022033
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
Genome location	scaffold2:13681887..13687469
RNA-Seq Expression	Spg022033
Synteny	Spg022033
Gene Ontology terms	NA
InterPro domains	IPR025322 - Protein of unknown function DUF4228, plant IPR026960 - Reverse transcriptase zinc-binding domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6588215.1 hypothetical protein SDJN03_16780, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-83

81.63

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Query:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSSL
        MGNSLSPCLH ISTT  RRSSAV LIFS+G+T++L GNHHIAGEIMFQFPDMMICHADSFFIGHP+PSLAIDDQLL GETYFVLPID F+SFDVLSTSSL
Subjt:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSSL

Query:  AAIGAGNGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS
        A+IGAGN   AKFSG+SPFEYI+GTNGR++IK+VPEF+V+LISPAA +    G GG FLCSTPEL+KHYDQLVGS+KGQVWSPKLE+ISEYKIR S
Subjt:  AAIGAGNGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS

KAG7022114.1 hypothetical protein SDJN02_15843, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.9e-86

82.14

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Query:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSSL
        MGNSLSPCLH ISTTHR RSSAV LIFS+G+T++L GNHHIAGEIMFQFPDMMICHADSFFIGHP+PSLAIDDQLL GETYFVLPID F+SFDVLSTSSL
Subjt:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSSL

Query:  AAIGAGNGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS
        A+IGA N   AKFSG+SPFEYI+GTNGR++IK+VPEF+V+LISPAA +    GGGG FLCSTPEL+KHYDQLVGS+KGQVWSPKLE+ISEYKIR S
Subjt:  AAIGAGNGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS

XP_008450347.1 PREDICTED: uncharacterized protein LOC103491983 [Cucumis melo]

2.7e-82

79.29

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Query:  MGNSLSPCLHPISTTHRR-RSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSS
        MGN++SPCL  IS + RR R SAVKL+F+DG T+ L GNHH AGEIMFQFPDMM+CHA+SFFIGHP+PSL+IDD+LL GETY VLPID F+S DVLSTSS
Subjt:  MGNSLSPCLHPISTTHRR-RSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSS

Query:  LAAIGAGNGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGD-GGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS
        LA IGAGN +A KFSG  PFEY++GTNGRVLIKV+PEFIV+LISPAA DGG+ GGGGGGFLCSTPELKKHYDQLVGS+KGQVWSPKLETISEYKIR S
Subjt:  LAAIGAGNGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGD-GGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS

XP_022927424.1 uncharacterized protein LOC111434251 [Cucurbita moschata]

1.5e-85

82.14

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Query:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSSL
        MGNSLSPCLH ISTT RR SSAV LIFS+G+T++L GNHHIAGEIMFQFPDMMICHADSFFIGHP+PSLAIDDQLL GETYFVLPID F+SFDVLSTSSL
Subjt:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSSL

Query:  AAIGAGNGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS
        A+IGAGN   AKFSG+SPFEYI+GTNGR++IK+VPEF+V+LISPAA +    GGGG FLCSTPEL+KHYDQLVGS+KGQVWSPKLE+ISEYKIR S
Subjt:  AAIGAGNGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS

XP_023530355.1 uncharacterized protein LOC111792953 [Cucurbita pepo subsp. pepo]

7.5e-85

81.12

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Query:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSSL
        MGNSLSPCLH ISTT RRRSSAV LIFS+G+T++L GNHHIAGEIMFQFPDMMICHADSFFIGHP+PSLAIDDQL+ GETYFV+PID F+SFDVLSTSSL
Subjt:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSSL

Query:  AAIGAGNGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS
        A+IGAGN   AKFSG+SPFEYI+GTNGR++IK+VPEF+V+LISPAA +     GGG FLCSTPEL+KHYDQLVGS+KGQVWSPKLE+ISEYKIR S
Subjt:  AAIGAGNGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LZV5 Uncharacterized protein

6.6e-79

75.25

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Query:  MGNSLSPCLHPISTTH-RRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSS
        MGN++SPCL  IS +   RR S VKL+F++G T+ LAG+HH AGEIMFQFPDMM+CHA+SFFIGHP+PSL+IDDQL+ GETY +LPID F+S DVLSTSS
Subjt:  MGNSLSPCLHPISTTH-RRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSS

Query:  LAAIGAGNGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGDG-GGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS
        LA IGAGN +  KFSG  PFEY++GTNG+VLIKV+PEFIV+LIS AA DGG+  GGGGGFLCSTPELKKHYDQLVGS+KGQVWSPKLETISEYKIR S
Subjt:  LAAIGAGNGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGDG-GGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS

A0A1S3BP11 uncharacterized protein LOC103491983

1.3e-82

79.29

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Query:  MGNSLSPCLHPISTTHRR-RSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSS
        MGN++SPCL  IS + RR R SAVKL+F+DG T+ L GNHH AGEIMFQFPDMM+CHA+SFFIGHP+PSL+IDD+LL GETY VLPID F+S DVLSTSS
Subjt:  MGNSLSPCLHPISTTHRR-RSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSS

Query:  LAAIGAGNGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGD-GGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS
        LA IGAGN +A KFSG  PFEY++GTNGRVLIKV+PEFIV+LISPAA DGG+ GGGGGGFLCSTPELKKHYDQLVGS+KGQVWSPKLETISEYKIR S
Subjt:  LAAIGAGNGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGD-GGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS

A0A5A7UN34 DUF4228 domain protein

1.7e-82

79.29

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Query:  MGNSLSPCLHPISTTHRR-RSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSS
        MGN++SPCL  IS + RR R SAVKL+F+DG T+ L GNHH AGEIMFQFPDMM+CHA+SFFIGHP+PSL+IDD+LL GETY VLPID F+S DVLSTSS
Subjt:  MGNSLSPCLHPISTTHRR-RSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSS

Query:  LAAIGAGNGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGD-GGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS
        LA IGAGN +A KFSG  PFEY++GTNGRVLIKV+PEFIV+LISPAA DGG+ GGGGGGFLCSTPELKKHYDQLVGS+KGQVWSPKLETISEYKIR S
Subjt:  LAAIGAGNGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGD-GGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS

A0A6J1EHY7 uncharacterized protein LOC111434251

7.3e-86

82.14

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Query:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSSL
        MGNSLSPCLH ISTT RR SSAV LIFS+G+T++L GNHHIAGEIMFQFPDMMICHADSFFIGHP+PSLAIDDQLL GETYFVLPID F+SFDVLSTSSL
Subjt:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSSL

Query:  AAIGAGNGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS
        A+IGAGN   AKFSG+SPFEYI+GTNGR++IK+VPEF+V+LISPAA +    GGGG FLCSTPEL+KHYDQLVGS+KGQVWSPKLE+ISEYKIR S
Subjt:  AAIGAGNGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS

A0A6J1HB88 uncharacterized protein LOC111461744

2.5e-78

76.53

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Query:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSSL
        MGN++SPCL P S T+R RSSAVKLIFS G TR LAG+HH AGEIMFQFPDM++CHADSFFIGH +PSLAI+D+LL GETY VLPID FS  DVLSTSSL
Subjt:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSSL

Query:  AAIGAGNGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS
        AAIGAGN AA KFS   PFEY++G NG+ LIKV+PEFIV+L+SP  A GG+   GGGFLCSTPELKKHYDQLVG+SKGQVWSP LETISEYKIR S
Subjt:  AAIGAGNGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G28190.1 unknown protein

1.3e-15

28.93

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Query:  CLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSSLAAIGAGN
        CLHP           +KL+ SDG +  +     +  E+   FP   IC +D  +IG   P L+  + L  G  YF+LP D F +     T +        
Subjt:  CLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSSLAAIGAGN

Query:  GAAAKFSGESPFEYI--QGTNG-RVLIKVVPEFIVKL--------ISPAAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS
        G   K + + P  ++  +G  G R+ I+V  EF+ +L        ++    +   GG G G +C+T +LKK Y QLVG  +   W PKLETI+E K  + 
Subjt:  GAAAKFSGESPFEYI--QGTNG-RVLIKVVPEFIVKL--------ISPAAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLS

Query:  LRSLSKTYSEVVGSNLQVSLIRKNSRSLEGLEADADSLDKNS
          ++ KT  +     +     + +S S   L++ + S  K S
Subjt:  LRSLSKTYSEVVGSNLQVSLIRKNSRSLEGLEADADSLDKNS

AT5G12340.1 unknown protein

3.4e-43

47.62

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Query:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGL-TRTLAG-NHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTS
        MG SL     PI    RRR   V L+F + + T+TL G   H+AGEIMF+FPD ++CHADSF+IG  +P+LA+DD L+PG+TYFVLPI+ F  + +L+TS
Subjt:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGL-TRTLAG-NHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTS

Query:  SLAAIGA------GNGAAAKFSGES---PFEYIQGTNGRVLIKVVPEFIVKLISP---AAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLE
         L+   +       N     F+  S   PFEY QG NG++LIKV PEFI+ LI        +     G    +C++PELKK YDQLVG ++  +WSP L+
Subjt:  SLAAIGA------GNGAAAKFSGES---PFEYIQGTNGRVLIKVVPEFIVKLISP---AAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLE

Query:  TISEYKIRLS
        TISE+KIR+S
Subjt:  TISEYKIRLS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGAAATTCACTCTCTCCATGTCTTCATCCCATCTCCACCACCCACCGCCGCCGCTCCTCCGCCGTCAAGCTCATCTTCTCCGACGGCCTCACCAGAACCCTGGCTGG
AAACCACCACATCGCCGGCGAGATCATGTTCCAATTCCCCGACATGATGATCTGCCACGCCGACTCCTTCTTCATCGGCCACCCGGTCCCCTCCTTAGCCATCGACGACC
AGCTCCTCCCGGGCGAGACCTACTTCGTTCTCCCGATCGACCCATTCTCCTCCTTCGACGTTCTCTCGACGTCGTCGCTCGCCGCAATCGGCGCCGGTAATGGGGCAGCG
GCGAAATTCTCCGGCGAGAGCCCTTTTGAGTACATTCAGGGCACGAATGGGAGAGTTCTGATTAAGGTCGTGCCGGAGTTTATCGTTAAGCTCATTTCTCCGGCGGCGGC
GGACGGCGGAGATGGCGGCGGAGGAGGTGGGTTTTTGTGTAGTACGCCGGAGTTGAAGAAGCACTACGATCAACTAGTTGGATCGTCGAAGGGGCAAGTTTGGTCGCCGA
AATTGGAGACTATTTCGGAGTATAAAATTAGGCTAAGCCTACGGTCTCTGAGTAAAACCTATTCAGAAGTCGTCGGTTCAAATCTTCAGGTGAGCTTAATCAGAAAGAAT
TCACGATCTCTAGAAGGTCTTGAAGCGGATGCAGATTCTTTGGACAAAAATTCATGGGCAAAGGTTGCTTCTAAGTGGGGTTGTCTGAATCAACCCCTTCTCATTTCTTA
CCTGGGAACGTCGTTGGGGGGAAAGCCATCAGCTGATTCTTTTTGGAGCCCGATTATTGATAACATTCAAAAGAAGCTTGATGGTTGGCATTTTTCCTACTTATCTGAAG
GGGGCCGAAAAATCCTTATTCAATCCACTCTCAACAGCATCCCGACATACATGTTATCAGTCTTCAATGCCCATATTGCCATATGTAAAAAGCTCGACAAGATCATCAGA
AACTTCTTGTGGAATGGTACAGATCTCTCAAGCTCCATGTCTTTCATTTGCTGGGATATAGTTATGGCTCCAAAATTATCTGGGAGCAAATTGCTTGGGAGGAGGTGGCT
TCAAACTTCCCTCGTCCATCCCATTCGAGGGGGACCCGATATCATCCACTGGACCGCAAATTCTGATGGCTCTTTTAACACGACATCAGCCCGTCTCATTTGCAGAGGAT
CGGACATCTTGAATGGCTCGCTAGAACAAGTTTCTGAGGTAGTGCTTAACAATCTGTGGAAAGCCAGTTTTCCAAGGAAGTGTAAATTTTTCCTTTGGACCATTCTCCAT
AGAAAGCTCAACACTACAGATATGCTCGATCCAAAGAAAAAATTCAAATCCACAGCTCTGAGTCCAAACAGATGTCCTCTTTGTAAAAATCATTCGGAAACTTTGGACCA
TATTTTTCTTCACTGTAATGCCGCTAGCCTTTTCTGGAACCAGTTGTTCGAAGCAAGAGGTCTATTCTTTTCAAGACCTAATCAGATTCAAGCGTTCTGTGTTGAGCTTC
TTGCCGTAAAGCCAAAGTCTCGAAAATATATTCTATTTCAGAATATTTTTGTTGCCTCTATGTGGTCCATTTGGATCGAAAGAAATAGCCGTATCTTCAACGACAAGGAA
CGTTCAGTAGCTCAGCTTTGGGAGGATATTATAGCTCTTGTTGCTTTCTGGTCTTCATCTTCTGATTTCTTTTCCAGCCATGATGCGTCTTCCATTTTCCTAAATAAGCC
TTATCATTATGCATCAAAGGACGACATAGTATATTTAAAGTAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFSSFDVLSTSSLAAIGAGNGAA
AKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPAAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKIRLSLRSLSKTYSEVVGSNLQVSLIRKN
SRSLEGLEADADSLDKNSWAKVASKWGCLNQPLLISYLGTSLGGKPSADSFWSPIIDNIQKKLDGWHFSYLSEGGRKILIQSTLNSIPTYMLSVFNAHIAICKKLDKIIR
NFLWNGTDLSSSMSFICWDIVMAPKLSGSKLLGRRWLQTSLVHPIRGGPDIIHWTANSDGSFNTTSARLICRGSDILNGSLEQVSEVVLNNLWKASFPRKCKFFLWTILH
RKLNTTDMLDPKKKFKSTALSPNRCPLCKNHSETLDHIFLHCNAASLFWNQLFEARGLFFSRPNQIQAFCVELLAVKPKSRKYILFQNIFVASMWSIWIERNSRIFNDKE
RSVAQLWEDIIALVAFWSSSSDFFSSHDASSIFLNKPYHYASKDDIVYLK

Spg022033 (gene) of Sponge gourd (cylindrica) v1 genome