; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022053 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022053
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRAC-like GTP binding protein 5
Genome locationscaffold2:5463307..5467385
RNA-Seq ExpressionSpg022053
SyntenySpg022053
Gene Ontology termsGO:0007015 - actin filament organization (biological process)
GO:0007163 - establishment or maintenance of cell polarity (biological process)
GO:0007264 - small GTPase mediated signal transduction (biological process)
GO:0008360 - regulation of cell shape (biological process)
GO:0030865 - cortical cytoskeleton organization (biological process)
GO:0032956 - regulation of actin cytoskeleton organization (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005856 - cytoskeleton (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0005938 - cell cortex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031410 - cytoplasmic vesicle (cellular component)
GO:0042995 - cell projection (cellular component)
GO:0019901 - protein kinase binding (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0003924 - GTPase activity (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR005225 - Small GTP-binding protein domain
IPR003578 - Small GTPase Rho
IPR001806 - Small GTPase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8378317.1 hypothetical protein HHK36_029656 [Tetracentron sinense]1.1e-4555.24Show/hide
Query:  QPESESFFLPSGFWCFQWLPVLQGSSSVLLSEMGLWGRPACSYAILVTNSPLYVLLFMERFIWFHLLCWLLVCFCSVFLMILGFNCSLSFVALNARKFLF
        QP   SFF+   F   QWL  L GSS+VL  EM L  R AC  A LVTNSPL+               W+ +                         +  
Subjt:  QPESESFFLPSGFWCFQWLPVLQGSSSVLLSEMGLWGRPACSYAILVTNSPLYVLLFMERFIWFHLLCWLLVCFCSVFLMILGFNCSLSFVALNARKFLF

Query:  GIGVVIIIACVFPTESIISCVYQDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPG
        G+                    QDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLVSRASYENVLKKWIPELQH+APG
Subjt:  GIGVVIIIACVFPTESIISCVYQDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPG

Query:  VPVVLVGTKL
        VPVVL GTKL
Subjt:  VPVVLVGTKL

KJB53184.1 hypothetical protein B456_008G297200 [Gossypium raimondii]1.5e-4293.55Show/hide
Query:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKLGRPSFS
        DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKLG  + +
Subjt:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKLGRPSFS

KJB53192.1 hypothetical protein B456_008G297200 [Gossypium raimondii]1.9e-4292.63Show/hide
Query:  ISCVY--QDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL
        ++C++  QDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL
Subjt:  ISCVY--QDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL

PON61075.1 Small GTP-binding domain containing protein [Parasponia andersonii]1.5e-4295.56Show/hide
Query:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKLGRP
        DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLVSRASYENVLKKWIPELQH++PGVPVVLVGTKLG+P
Subjt:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKLGRP

PON93343.1 Small GTP-binding domain containing protein [Trema orientale]1.5e-4295.56Show/hide
Query:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKLGRP
        DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLVSRASYENVLKKWIPELQH++PGVPVVLVGTKLG+P
Subjt:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKLGRP

TrEMBL top hitse value%identityAlignment
A0A0D2Q4D2 Uncharacterized protein9.2e-4392.63Show/hide
Query:  ISCVY--QDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL
        ++C++  QDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL
Subjt:  ISCVY--QDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL

A0A0D2T9B2 Uncharacterized protein7.1e-4393.55Show/hide
Query:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKLGRPSFS
        DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKLG  + +
Subjt:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKLGRPSFS

A0A0D2T9C2 Uncharacterized protein9.2e-4388.35Show/hide
Query:  IACVFPTESIISCVYQDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVG
        +AC+F  +   S  Y DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVG
Subjt:  IACVFPTESIISCVYQDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVG

Query:  TKL
        TKL
Subjt:  TKL

A0A2P5CJA8 Small GTP-binding domain containing protein7.1e-4395.56Show/hide
Query:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKLGRP
        DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLVSRASYENVLKKWIPELQH++PGVPVVLVGTKLG+P
Subjt:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKLGRP

A0A2P5F6B1 Small GTP-binding domain containing protein7.1e-4395.56Show/hide
Query:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKLGRP
        DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLVSRASYENVLKKWIPELQH++PGVPVVLVGTKLG+P
Subjt:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKLGRP

SwissProt top hitse value%identityAlignment
O04369 Rac-like GTP-binding protein RAC17.5e-4288.51Show/hide
Query:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL
        DY+PTVFDNFSANVVV+G+TVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSL+S+ASYEN+ KKWIPEL+HYAPGVP++LVGTKL
Subjt:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL

O82481 Rac-like GTP-binding protein ARAC106.8e-4394.25Show/hide
Query:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL
        DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVF+L+FSLVSRASYENV KKWIPELQH+APGVP+VLVGTKL
Subjt:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL

Q67VP4 Rac-like GTP-binding protein 41.8e-4393.1Show/hide
Query:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL
        DY+PTVFDNFSANVVV+GTTVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLVSRASYENV+KKW+PELQHYAPGVP+VLVGTKL
Subjt:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL

Q6Z808 Rac-like GTP-binding protein 35.2e-4393.1Show/hide
Query:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL
        DYIPTVFDNFSANVVV+ TTVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLVSRASYEN++KKWIPELQHYAPGVP+VLVGTKL
Subjt:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL

Q9SU67 Rac-like GTP-binding protein ARAC85.8e-4290.8Show/hide
Query:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL
        DYIPTVFDNFS NVVVEG TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSL+SRASYENV KKWIPELQH+APGVP+VLVGTK+
Subjt:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL

Arabidopsis top hitse value%identityAlignment
AT1G20090.1 RHO-related protein from plants 27.0e-4388.51Show/hide
Query:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL
        DY+PTVFDNFSANVVV+G TVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSL+S+ASYEN+ KKWIPEL+HYAPGVP++LVGTKL
Subjt:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL

AT1G75840.1 RAC-like GTP binding protein 55.4e-4389.66Show/hide
Query:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL
        DY+PTVFDNFSANVVV+G TVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSL+S+ASYENV KKWIPEL+HYAPGVP++LVGTKL
Subjt:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL

AT3G48040.1 RHO-related protein from plants 104.1e-4390.8Show/hide
Query:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL
        DYIPTVFDNFS NVVVEG TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSL+SRASYENV KKWIPELQH+APGVP+VLVGTK+
Subjt:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL

AT3G51290.2 Protein of unknown function (DUF630) ;Protein of unknown function (DUF632)3.1e-4389.77Show/hide
Query:  QDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL
        +DY+PTVFDNFSANVVV G+TVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSL+S+ASYENV KKWIPEL+HYAPGVP+VLVGTKL
Subjt:  QDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL

AT5G62880.1 RAC-like 104.8e-4494.25Show/hide
Query:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL
        DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVF+L+FSLVSRASYENV KKWIPELQH+APGVP+VLVGTKL
Subjt:  DYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCCCAAAAGGGAAATGGGCCATAAGATTGGGCCTTGGCCCAACTCCGCTCGGCCTCAGCCCAAGCCCGAGGCCGACCCTCGGCCCGCTTGTGTGGGTCGAGTTTC
CTCCCCTCTACTCAGTCCCTGGAGTCTTTTGGCTGCCCTTGTTCAACCTGAGTCTGAGAGTTTCTTCTTGCCATCTGGGTTTTGGTGTTTTCAATGGCTTCCAGTGCTTC
AAGGTTCATCAAGTGTGTTACTGTCGGAGATGGGGCTGTGGGGAAGACCTGCATGCTCATATGCTATACTAGTAACAAATTCCCCACTGTATGTTCTTCTTTTCATGGAA
AGATTCATCTGGTTCCATCTTCTCTGCTGGTTGTTGGTGTGTTTTTGTTCTGTGTTTCTCATGATTTTGGGCTTCAATTGCTCTCTTTCCTTTGTGGCTCTTAATGCAAG
AAAATTTTTGTTTGGAATTGGTGTTGTGATCATAATTGCCTGTGTTTTTCCAACAGAAAGCATAATCAGTTGTGTTTATCAGGATTACATTCCAACGGTGTTTGATAACT
TCAGTGCAAATGTGGTGGTTGAAGGCACCACTGTCAATTTAGGCCTCTGGGATACAGCCGGTCAAGAAGATTACAATAGGTTAAGGCCATTGAGCTACAGAGGAGCTGAT
GTTTTCATCCTTGCCTTTTCGTTAGTTAGCCGAGCGAGTTACGAAAACGTACTTAAGAAGTGGATTCCAGAGCTTCAACATTATGCACCTGGAGTCCCGGTGGTATTGGT
TGGCACCAAATTGGGTAGGCCATCCTTTTCTGATTGTAAGAAAGTAGGAGTTGAGAAGGGGTCACCTAAAGTAGGAATGCTTGCAAAGAGGAAAGTCCTTGACATGAAAC
CCTTGTTATTTTTGTTTGGAGTGCTTCCAAGGGGCGGGCCCTTGTGGGTTAGACCACGGTCCCAGTTCAAGACTCCAAAAGGAATGCTGCTCGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACCCCAAAAGGGAAATGGGCCATAAGATTGGGCCTTGGCCCAACTCCGCTCGGCCTCAGCCCAAGCCCGAGGCCGACCCTCGGCCCGCTTGTGTGGGTCGAGTTTC
CTCCCCTCTACTCAGTCCCTGGAGTCTTTTGGCTGCCCTTGTTCAACCTGAGTCTGAGAGTTTCTTCTTGCCATCTGGGTTTTGGTGTTTTCAATGGCTTCCAGTGCTTC
AAGGTTCATCAAGTGTGTTACTGTCGGAGATGGGGCTGTGGGGAAGACCTGCATGCTCATATGCTATACTAGTAACAAATTCCCCACTGTATGTTCTTCTTTTCATGGAA
AGATTCATCTGGTTCCATCTTCTCTGCTGGTTGTTGGTGTGTTTTTGTTCTGTGTTTCTCATGATTTTGGGCTTCAATTGCTCTCTTTCCTTTGTGGCTCTTAATGCAAG
AAAATTTTTGTTTGGAATTGGTGTTGTGATCATAATTGCCTGTGTTTTTCCAACAGAAAGCATAATCAGTTGTGTTTATCAGGATTACATTCCAACGGTGTTTGATAACT
TCAGTGCAAATGTGGTGGTTGAAGGCACCACTGTCAATTTAGGCCTCTGGGATACAGCCGGTCAAGAAGATTACAATAGGTTAAGGCCATTGAGCTACAGAGGAGCTGAT
GTTTTCATCCTTGCCTTTTCGTTAGTTAGCCGAGCGAGTTACGAAAACGTACTTAAGAAGTGGATTCCAGAGCTTCAACATTATGCACCTGGAGTCCCGGTGGTATTGGT
TGGCACCAAATTGGGTAGGCCATCCTTTTCTGATTGTAAGAAAGTAGGAGTTGAGAAGGGGTCACCTAAAGTAGGAATGCTTGCAAAGAGGAAAGTCCTTGACATGAAAC
CCTTGTTATTTTTGTTTGGAGTGCTTCCAAGGGGCGGGCCCTTGTGGGTTAGACCACGGTCCCAGTTCAAGACTCCAAAAGGAATGCTGCTCGATTAG
Protein sequenceShow/hide protein sequence
MDPKREMGHKIGPWPNSARPQPKPEADPRPACVGRVSSPLLSPWSLLAALVQPESESFFLPSGFWCFQWLPVLQGSSSVLLSEMGLWGRPACSYAILVTNSPLYVLLFME
RFIWFHLLCWLLVCFCSVFLMILGFNCSLSFVALNARKFLFGIGVVIIIACVFPTESIISCVYQDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGAD
VFILAFSLVSRASYENVLKKWIPELQHYAPGVPVVLVGTKLGRPSFSDCKKVGVEKGSPKVGMLAKRKVLDMKPLLFLFGVLPRGGPLWVRPRSQFKTPKGMLLD