CuGenDBv2

Gene ID	Spg022068
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	50S ribosomal protein L14, chloroplastic
Genome location	scaffold2:8837948..8838845
RNA-Seq Expression	Spg022068
Synteny	Spg022068
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0015979 - photosynthesis (biological process) GO:0005840 - ribosome (cellular component) GO:0009523 - photosystem II (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR000218 - Ribosomal protein L14P IPR009518 - Photosystem II PsbX IPR036853 - Ribosomal protein L14 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7023687.1 Mechanosensitive ion channel protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.6e-44

85.71

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Query:  SMASTSAVSMALPLTHATHRRLSNDAFFNPLPL------RKAIAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLS
        SMASTSAVS+ALPLT+ATH+RLSN AFFNPLP       RKAIAAAPTSNG LV VRSSLKEKA+TGLTAAALTA+MVIPEVAEAAGPGVSPSLKNFLLS
Subjt:  SMASTSAVSMALPLTHATHRRLSNDAFFNPLPL------RKAIAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLS

Query:  IAAGGVVVFAILGAVIGVANFDPVKR
        IAAGG VV AILGAVIGV+NFDPVKR
Subjt:  IAAGGVVVFAILGAVIGVANFDPVKR

XP_008450907.1 PREDICTED: uncharacterized protein LOC103492356 [Cucumis melo]

3.1e-42

84.55

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Query:  MASTSAVSMALPLTHATHRRLSNDAFFNPLP---LRKAIAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAAG
        MASTSAVSMALP THATH+ LSNDAFFNPLP    RK IAAAP SNGR+V VRSSLKEKAV G+TAAAL A+MVIPEVAEAAG GVSPSLKNFLLSIAAG
Subjt:  MASTSAVSMALPLTHATHRRLSNDAFFNPLP---LRKAIAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAAG

Query:  GVVVFAILGAVIGVANFDPVKRS
        G VV AI GAVIGVANFDPVKRS
Subjt:  GVVVFAILGAVIGVANFDPVKRS

XP_022960741.1 uncharacterized protein LOC111461452 [Cucurbita moschata]

1.3e-43

84.8

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Query:  MASTSAVSMALPLTHATHRRLSNDAFFNPLPL------RKAIAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSI
        MASTS VS+ALPLT+ATH+RLSN AFFNPLP       RKAIAAAPTS+GRLV VRSSLKEKA+TGLTAAALTA+MVIPEVAEAAGPGVSPSLKNFLLSI
Subjt:  MASTSAVSMALPLTHATHRRLSNDAFFNPLPL------RKAIAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSI

Query:  AAGGVVVFAILGAVIGVANFDPVKR
        AAGG VV AILGAVIGV+NFDPVKR
Subjt:  AAGGVVVFAILGAVIGVANFDPVKR

XP_022987287.1 uncharacterized protein LOC111484883 [Cucurbita maxima]

6.3e-43

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Query:  MASTSAVSMALPLTHATHRRLSNDAFFNPLP------LRKAIAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSI
        MASTS VS+ALPLT ATH+RLSN AFFNPLP       RKAIAAAPTSNGRLV VRSSLKEKA+TG++AAALTA+MVIPEVAEAAGPGVSPSLKNFLLSI
Subjt:  MASTSAVSMALPLTHATHRRLSNDAFFNPLP------LRKAIAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSI

Query:  AAGGVVVFAILGAVIGVANFDPVKR
        AAGG VV AILGAVIGV+NFDPVKR
Subjt:  AAGGVVVFAILGAVIGVANFDPVKR

XP_038878912.1 uncharacterized protein LOC120071001 [Benincasa hispida]

3.4e-44

86.99

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Query:  MASTSAVSMALPLTHATHRRLSNDAFFNPLP---LRKAIAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAAG
        MASTSA+SMALPLT+ATH+ LSNDAFFNPLP    RKAIAAAP SNGR+V VRSSLKEKAV G+TAAALTA+MVIPEVAEAAGPGVSPSLKNFLLSIAAG
Subjt:  MASTSAVSMALPLTHATHRRLSNDAFFNPLP---LRKAIAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAAG

Query:  GVVVFAILGAVIGVANFDPVKRS
        G VV AILGAVIGVANFDPVKRS
Subjt:  GVVVFAILGAVIGVANFDPVKRS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LWL3 Uncharacterized protein

4.9e-41

82.11

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Query:  MASTSAVSMALPLTHATHRRLSNDAFFNPLP---LRKAIAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAAG
        MASTSA+SMALP THAT + LSNDAFFNPLP    RK IA AP SNGR++ VRSS KEKAV G++AAALTA+MVIPEVAEAAG GVSPSLKNFLLSIAAG
Subjt:  MASTSAVSMALPLTHATHRRLSNDAFFNPLP---LRKAIAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAAG

Query:  GVVVFAILGAVIGVANFDPVKRS
        GVVV AILGAVIGVANFDPVKRS
Subjt:  GVVVFAILGAVIGVANFDPVKRS

A0A1S3BRD2 uncharacterized protein LOC103492356

1.5e-42

84.55

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Query:  MASTSAVSMALPLTHATHRRLSNDAFFNPLP---LRKAIAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAAG
        MASTSAVSMALP THATH+ LSNDAFFNPLP    RK IAAAP SNGR+V VRSSLKEKAV G+TAAAL A+MVIPEVAEAAG GVSPSLKNFLLSIAAG
Subjt:  MASTSAVSMALPLTHATHRRLSNDAFFNPLP---LRKAIAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAAG

Query:  GVVVFAILGAVIGVANFDPVKRS
        G VV AI GAVIGVANFDPVKRS
Subjt:  GVVVFAILGAVIGVANFDPVKRS

A0A6J1H8G2 uncharacterized protein LOC111461452

6.2e-44

84.8

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Query:  MASTSAVSMALPLTHATHRRLSNDAFFNPLPL------RKAIAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSI
        MASTS VS+ALPLT+ATH+RLSN AFFNPLP       RKAIAAAPTS+GRLV VRSSLKEKA+TGLTAAALTA+MVIPEVAEAAGPGVSPSLKNFLLSI
Subjt:  MASTSAVSMALPLTHATHRRLSNDAFFNPLPL------RKAIAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSI

Query:  AAGGVVVFAILGAVIGVANFDPVKR
        AAGG VV AILGAVIGV+NFDPVKR
Subjt:  AAGGVVVFAILGAVIGVANFDPVKR

A0A6J1HV97 uncharacterized protein LOC111467755

1.2e-39

85.12

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Query:  MASTSAVSMALPLTHATHRRLSNDAFFNPLP--LRKAIAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAAGG
        MAS  AVSMALPLT+A+ +RLSNDAFFNPLP   RKAI AAP    RLVVV SSLKEKAVTGLTAAAL+AAMVIPEVAEAAGPGVSPSLKNFLLSIAAGG
Subjt:  MASTSAVSMALPLTHATHRRLSNDAFFNPLP--LRKAIAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAAGG

Query:  VVVFAILGAVIGVANFDPVKR
        VVV AILGAVIGV+NFDPVKR
Subjt:  VVVFAILGAVIGVANFDPVKR

A0A6J1J9Y5 uncharacterized protein LOC111484883

3.1e-43

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Query:  MASTSAVSMALPLTHATHRRLSNDAFFNPLP------LRKAIAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSI
        MASTS VS+ALPLT ATH+RLSN AFFNPLP       RKAIAAAPTSNGRLV VRSSLKEKA+TG++AAALTA+MVIPEVAEAAGPGVSPSLKNFLLSI
Subjt:  MASTSAVSMALPLTHATHRRLSNDAFFNPLP------LRKAIAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSI

Query:  AAGGVVVFAILGAVIGVANFDPVKR
        AAGG VV AILGAVIGV+NFDPVKR
Subjt:  AAGGVVVFAILGAVIGVANFDPVKR

SwissProt top hits

e value

%identity

Alignment

B0Z4R2 50S ribosomal protein L14, chloroplastic

5.8e-07

52.83

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Query:  MCIRIIGVSNRRYAHIGDIIVAVIKKAVHGTNISHSHFTLNIYIHLQSVTVCN
        MCIRIIG SNRRYAHIGDIIVAVIK+A+  T++  S     + +       C+
Subjt:  MCIRIIGVSNRRYAHIGDIIVAVIKKAVHGTNISHSHFTLNIYIHLQSVTVCN

B0Z4Z6 50S ribosomal protein L14, chloroplastic

5.8e-07

52.83

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Query:  MCIRIIGVSNRRYAHIGDIIVAVIKKAVHGTNISHSHFTLNIYIHLQSVTVCN
        MCIRIIG SNRRYAHIGDIIVAVIK+A+  T++  S     + +       C+
Subjt:  MCIRIIGVSNRRYAHIGDIIVAVIKKAVHGTNISHSHFTLNIYIHLQSVTVCN

B1A971 50S ribosomal protein L14, chloroplastic

5.8e-07

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Query:  MCIRIIGVSNRRYAHIGDIIVAVIKKAVHGTNISHS
        MCIRIIG SNRRYAHIGD+IVAVIK+AV  T +  S
Subjt:  MCIRIIGVSNRRYAHIGDIIVAVIKKAVHGTNISHS

Q09ME1 50S ribosomal protein L14, chloroplastic

5.8e-07

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Query:  MCIRIIGVSNRRYAHIGDIIVAVIKKAVHGTNISHS
        MCIRIIG SNRRYAHIGD+IVAVIK+AV  T +  S
Subjt:  MCIRIIGVSNRRYAHIGDIIVAVIKKAVHGTNISHS

Q8WKP4 50S ribosomal protein L14, chloroplastic

2.0e-07

77.78

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Query:  MCIRIIGVSNRRYAHIGDIIVAVIKKAVHGTNISHS
        MCIRIIG SNRRYAHIGD+IVAVIKKAV  T +  S
Subjt:  MCIRIIGVSNRRYAHIGDIIVAVIKKAVHGTNISHS

Arabidopsis top hits

e value

%identity

Alignment

AT2G06520.1 photosystem II subunit X

6.3e-25

53.72

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Query:  MASTSAVSMALPLTHATHRRLSNDAFFNPLPLRKAIAAAPT-SNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAAGGV
        MASTSA+S+  PL      +  +  F  PLPL+ + A   T    + + V++   +KA+TG++AAALTA+MVIPE+AEAAG G+SPSLKNFLLSIA+GG+
Subjt:  MASTSAVSMALPLTHATHRRLSNDAFFNPLPLRKAIAAAPT-SNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAAGGV

Query:  VVFAILGAVIGVANFDPVKRS
        V+  I+G V+GV+NFDPVKR+
Subjt:  VVFAILGAVIGVANFDPVKRS

ATCG00780.1 ribosomal protein L14

5.4e-08

72.22

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Query:  MCIRIIGVSNRRYAHIGDIIVAVIKKAVHGTNISHS
        MCIRIIG SNRRYAHIGD+IVAVIK+A+  T +  S
Subjt:  MCIRIIGVSNRRYAHIGDIIVAVIKKAVHGTNISHS

Sequences

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CDS sequence

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ATGTGTATTCGAATCATAGGGGTTAGTAATCGACGATATGCTCATATTGGTGACATTATTGTTGCTGTAATCAAGAAAGCCGTCCATGGAACAAACATTTCTCATTCTCA
TTTCACTCTTAATATATACATCCATCTGCAATCAGTTACCGTTTGCAATAGAGCAGCAGCAACAGCACCTTTCGATTCATCAATGGCTTCCACTTCTGCAGTTTCAATGG
CCCTGCCGTTGACCCACGCCACCCACAGGCGACTCTCCAACGACGCCTTCTTCAATCCTTTGCCTCTTCGCAAGGCGATCGCCGCCGCTCCCACATCCAACGGAAGGCTC
GTCGTCGTCCGCTCCTCGTTGAAGGAGAAGGCCGTCACTGGACTCACCGCCGCCGCGCTCACGGCGGCGATGGTGATCCCGGAGGTTGCAGAGGCTGCCGGTCCTGGAGT
GTCGCCGTCGCTGAAGAACTTCTTGCTCAGCATTGCCGCCGGTGGAGTTGTGGTGTTCGCCATATTGGGAGCCGTCATCGGCGTCGCTAACTTCGATCCGGTCAAGCGTA
GCTGA

mRNA sequence

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Protein sequence

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MCIRIIGVSNRRYAHIGDIIVAVIKKAVHGTNISHSHFTLNIYIHLQSVTVCNRAAATAPFDSSMASTSAVSMALPLTHATHRRLSNDAFFNPLPLRKAIAAAPTSNGRL
VVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAAGGVVVFAILGAVIGVANFDPVKRS

Spg022068 (gene) of Sponge gourd (cylindrica) v1 genome