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Spg022069 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022069
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReplication protein A 32 kDa subunit B
Genome locationscaffold2:2306694..2307245
RNA-Seq ExpressionSpg022069
SyntenySpg022069
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058272.1 hypothetical protein E6C27_scaffold274G005980 [Cucumis melo var. makuwa]6.7e-6174.87Show/hide
Query:  AKDHHHLHQSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI
        AKDH     SEKPFSLLQAN+ FV+KILSRNSSFGRSARLPAC LPGQIPFNWE QPGLPK+QPSE  PPA+L PP  S S  GLSK P +VPKQ PVKI
Subjt:  AKDHHHLHQSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI

Query:  WFWKKPKRKV--VVRKNGAFGSSS--RRHVDRESEVC-RKSNDE---SASLSCISYSLSSSSSTASSSHGY-GRRRSKLGSLAKGFIRWAF
        WFW K +RK    V+KNGA GSSS  RRHVDRESE C RKSNDE   S+SLSCISYSLSS+SS+ASSS  Y  RRRSKLGSLAK FIRWAF
Subjt:  WFWKKPKRKV--VVRKNGAFGSSS--RRHVDRESEVC-RKSNDE---SASLSCISYSLSSSSSTASSSHGY-GRRRSKLGSLAKGFIRWAF

KAG6589705.1 Replication protein A 32 kDa subunit B, partial [Cucurbita argyrosperma subsp. sororia]3.6e-5471.04Show/hide
Query:  DHHHLHQSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVP-KQEPVKIW
        + H LH SE PFSLLQANELFV+KILSRNSS GRSARLPACRLPGQIPF WEAQPGLPKD+PSE     +L+PP    S +G SK P  VP +QE  KIW
Subjt:  DHHHLHQSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVP-KQEPVKIW

Query:  FWKKPKRKV--VVRKNGAFG--SSSRRHVDRESEVCRKSNDE-SASLSCISYSLSSSSSTASSSHGYGRRRSKLGSLAKGFIR
        FW KP++K+  VV+KNGAFG  SSSRRHV++ESE  RKSNDE S+SLSCIS+SLSSSS   SSS+GY RRRSKL SLAKGF+R
Subjt:  FWKKPKRKV--VVRKNGAFG--SSSRRHVDRESEVCRKSNDE-SASLSCISYSLSSSSSTASSSHGYGRRRSKLGSLAKGFIR

KGN65459.1 hypothetical protein Csa_020126 [Cucumis sativus]1.4e-5872.63Show/hide
Query:  AKDHHHLHQSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI
        AKDH     SEKPFSLLQAN+LFV+KILSRNSSFGRSARLPAC LPGQ+PFNWEAQPGLPK+QPS+  PP  L PP  S S  GLSK P +VPKQ PVKI
Subjt:  AKDHHHLHQSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI

Query:  WFWKKPKRKV--VVRKNGAFGSSS-RRHVDRESEVCR-KSNDE---SASLSCISYSLSSSSSTASSSHGY-GRRRSKLGSLAKGFIRWAF
        WFW K +RK    V+K+GA GSSS RRHVDR+SE CR KSNDE   S+SLSCISYS+SS+SS+ASSS  Y  RRR KLGSLAK FIRWAF
Subjt:  WFWKKPKRKV--VVRKNGAFGSSS-RRHVDRESEVCR-KSNDE---SASLSCISYSLSSSSSTASSSHGY-GRRRSKLGSLAKGFIRWAF

TYK11824.1 hypothetical protein E5676_scaffold152G00370 [Cucumis melo var. makuwa]2.5e-6074.35Show/hide
Query:  AKDHHHLHQSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI
        AKDH     SEKPFSLLQAN+ FV+KILSRNSSFGRSARLPAC LPGQIPFNWE QPGLPK+QPSE  PPA+L PP  S S  GLSK P +VPKQ PVKI
Subjt:  AKDHHHLHQSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI

Query:  WFWKKPKRKV--VVRKNGAFGSSS--RRHVDRESEVC-RKSND---ESASLSCISYSLSSSSSTASSSHGY-GRRRSKLGSLAKGFIRWAF
        WFW K +RK    V+KNGA GSSS  RRHVDRESE C RKSND    S+SLSCISYSLSS+SS+ASSS  Y  RRRSKLGSLAK FIRWAF
Subjt:  WFWKKPKRKV--VVRKNGAFGSSS--RRHVDRESEVC-RKSND---ESASLSCISYSLSSSSSTASSSHGY-GRRRSKLGSLAKGFIRWAF

XP_022987494.1 uncharacterized protein LOC111485037 [Cucurbita maxima]5.5e-5569.84Show/hide
Query:  HHLHQSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPK-QEPVKIWFW
        H LH SE PFSLLQANELFV+KILSRNSS GRSARLPACRLPGQIPF WEAQPGLPKD+PSE     +L PP      +G SK P  VPK QE  KIW W
Subjt:  HHLHQSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPK-QEPVKIWFW

Query:  KKPKRKV--VVRKNGAFG--SSSRRHVDRESEVCRKSNDES------ASLSCISYSLSSSSSTASSSHGYGRRRSKLGSLAKGFIRWAF
         KP++K+  VV+KNGAFG  SSSR HV++ESE CRKSNDES      +SLSCIS+SLSSSS   SSS+GY RRRSKL SLAKGF+RWAF
Subjt:  KKPKRKV--VVRKNGAFG--SSSRRHVDRESEVCRKSNDES------ASLSCISYSLSSSSSTASSSHGYGRRRSKLGSLAKGFIRWAF

TrEMBL top hitse value%identityAlignment
A0A0A0LWV3 Uncharacterized protein6.8e-5972.63Show/hide
Query:  AKDHHHLHQSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI
        AKDH     SEKPFSLLQAN+LFV+KILSRNSSFGRSARLPAC LPGQ+PFNWEAQPGLPK+QPS+  PP  L PP  S S  GLSK P +VPKQ PVKI
Subjt:  AKDHHHLHQSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI

Query:  WFWKKPKRKV--VVRKNGAFGSSS-RRHVDRESEVCR-KSNDE---SASLSCISYSLSSSSSTASSSHGY-GRRRSKLGSLAKGFIRWAF
        WFW K +RK    V+K+GA GSSS RRHVDR+SE CR KSNDE   S+SLSCISYS+SS+SS+ASSS  Y  RRR KLGSLAK FIRWAF
Subjt:  WFWKKPKRKV--VVRKNGAFGSSS-RRHVDRESEVCR-KSNDE---SASLSCISYSLSSSSSTASSSHGY-GRRRSKLGSLAKGFIRWAF

A0A2N9IVX0 Uncharacterized protein1.6e-1234.74Show/hide
Query:  QSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKIWFWKKPKR
        + +KP S+LQ+++ FVN+ILSR+ S GRS RL   R PG +PF WE +PG  K+ P     P  +EPP            P++     P K+WFWKK K+
Subjt:  QSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKIWFWKKPKR

Query:  KVVVRKNGAFGSSSRRHVDRESEVCRKSNDESASLSCISYS----LSSSSSTASSSHGYGRRRSKLGSLA------------KGFIRWAF
         +   K      S +   D +   C    DE       S S    ++SSS ++SSS   G   S + +LA            KGF+RW F
Subjt:  KVVVRKNGAFGSSSRRHVDRESEVCRKSNDESASLSCISYS----LSSSSSTASSSHGYGRRRSKLGSLA------------KGFIRWAF

A0A5A7UQX0 Uncharacterized protein3.2e-6174.87Show/hide
Query:  AKDHHHLHQSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI
        AKDH     SEKPFSLLQAN+ FV+KILSRNSSFGRSARLPAC LPGQIPFNWE QPGLPK+QPSE  PPA+L PP  S S  GLSK P +VPKQ PVKI
Subjt:  AKDHHHLHQSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI

Query:  WFWKKPKRKV--VVRKNGAFGSSS--RRHVDRESEVC-RKSNDE---SASLSCISYSLSSSSSTASSSHGY-GRRRSKLGSLAKGFIRWAF
        WFW K +RK    V+KNGA GSSS  RRHVDRESE C RKSNDE   S+SLSCISYSLSS+SS+ASSS  Y  RRRSKLGSLAK FIRWAF
Subjt:  WFWKKPKRKV--VVRKNGAFGSSS--RRHVDRESEVC-RKSNDE---SASLSCISYSLSSSSSTASSSHGY-GRRRSKLGSLAKGFIRWAF

A0A5D3CKX4 Uncharacterized protein1.2e-6074.35Show/hide
Query:  AKDHHHLHQSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI
        AKDH     SEKPFSLLQAN+ FV+KILSRNSSFGRSARLPAC LPGQIPFNWE QPGLPK+QPSE  PPA+L PP  S S  GLSK P +VPKQ PVKI
Subjt:  AKDHHHLHQSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKI

Query:  WFWKKPKRKV--VVRKNGAFGSSS--RRHVDRESEVC-RKSND---ESASLSCISYSLSSSSSTASSSHGY-GRRRSKLGSLAKGFIRWAF
        WFW K +RK    V+KNGA GSSS  RRHVDRESE C RKSND    S+SLSCISYSLSS+SS+ASSS  Y  RRRSKLGSLAK FIRWAF
Subjt:  WFWKKPKRKV--VVRKNGAFGSSS--RRHVDRESEVC-RKSND---ESASLSCISYSLSSSSSTASSSHGY-GRRRSKLGSLAKGFIRWAF

A0A6J1JJ17 uncharacterized protein LOC1114850372.7e-5569.84Show/hide
Query:  HHLHQSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPK-QEPVKIWFW
        H LH SE PFSLLQANELFV+KILSRNSS GRSARLPACRLPGQIPF WEAQPGLPKD+PSE     +L PP      +G SK P  VPK QE  KIW W
Subjt:  HHLHQSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPK-QEPVKIWFW

Query:  KKPKRKV--VVRKNGAFG--SSSRRHVDRESEVCRKSNDES------ASLSCISYSLSSSSSTASSSHGYGRRRSKLGSLAKGFIRWAF
         KP++K+  VV+KNGAFG  SSSR HV++ESE CRKSNDES      +SLSCIS+SLSSSS   SSS+GY RRRSKL SLAKGF+RWAF
Subjt:  KKPKRKV--VVRKNGAFG--SSSRRHVDRESEVCRKSNDES------ASLSCISYSLSSSSSTASSSHGYGRRRSKLGSLAKGFIRWAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGGATCATCATCATCTTCATCAATCTGAAAAACCCTTTTCATTACTCCAAGCAAATGAGTTATTCGTCAACAAAATCCTCTCCAGAAACTCTTCATTCGGCCG
CTCTGCCCGTCTCCCCGCCTGCCGCCTGCCCGGCCAAATCCCCTTCAATTGGGAAGCGCAGCCCGGGCTGCCCAAAGACCAACCCTCGGAAATTCTCCCGCCGGCCGACC
TCGAGCCACCGACCGGCTCCGGCTCCGGCGAAGGCCTCTCGAAACTCCCCCGCATAGTCCCCAAGCAGGAGCCTGTTAAGATTTGGTTTTGGAAAAAGCCGAAGAGAAAA
GTCGTTGTTAGGAAAAACGGTGCGTTTGGATCGTCTTCAAGACGACATGTCGATCGTGAGAGTGAGGTTTGTAGAAAATCAAACGACGAGTCCGCGTCGTTGTCCTGTAT
TTCTTACTCCTTGTCTTCTAGTTCTTCTACGGCCTCGTCGTCACATGGCTATGGCCGACGCCGGTCTAAACTCGGCAGCCTGGCCAAAGGGTTCATAAGGTGGGCCTTTT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGGATCATCATCATCTTCATCAATCTGAAAAACCCTTTTCATTACTCCAAGCAAATGAGTTATTCGTCAACAAAATCCTCTCCAGAAACTCTTCATTCGGCCG
CTCTGCCCGTCTCCCCGCCTGCCGCCTGCCCGGCCAAATCCCCTTCAATTGGGAAGCGCAGCCCGGGCTGCCCAAAGACCAACCCTCGGAAATTCTCCCGCCGGCCGACC
TCGAGCCACCGACCGGCTCCGGCTCCGGCGAAGGCCTCTCGAAACTCCCCCGCATAGTCCCCAAGCAGGAGCCTGTTAAGATTTGGTTTTGGAAAAAGCCGAAGAGAAAA
GTCGTTGTTAGGAAAAACGGTGCGTTTGGATCGTCTTCAAGACGACATGTCGATCGTGAGAGTGAGGTTTGTAGAAAATCAAACGACGAGTCCGCGTCGTTGTCCTGTAT
TTCTTACTCCTTGTCTTCTAGTTCTTCTACGGCCTCGTCGTCACATGGCTATGGCCGACGCCGGTCTAAACTCGGCAGCCTGGCCAAAGGGTTCATAAGGTGGGCCTTTT
AA
Protein sequenceShow/hide protein sequence
MAKDHHHLHQSEKPFSLLQANELFVNKILSRNSSFGRSARLPACRLPGQIPFNWEAQPGLPKDQPSEILPPADLEPPTGSGSGEGLSKLPRIVPKQEPVKIWFWKKPKRK
VVVRKNGAFGSSSRRHVDRESEVCRKSNDESASLSCISYSLSSSSSTASSSHGYGRRRSKLGSLAKGFIRWAF