; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022093 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022093
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold2:5677079..5679680
RNA-Seq ExpressionSpg022093
SyntenySpg022093
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEV26082.1 hypothetical protein [Tanacetum cinerariifolium]1.5e-1124.74Show/hide
Query:  VGCEVGVLPTSYLGLPLGHNSKSITFLNLWWTKCARGGIKDVEETYFWEDKWVVDRPLYAMFPHLYHLSSMKNHFVVDVLD-----------PSGSSMSS
        +GC+    P  Y+G+P+G N    ++    W       I +    +FW+D W  ++PL   FP ++ L   KN F+ D +            P G +   
Subjt:  VGCEVGVLPTSYLGLPLGHNSKSITFLNLWWTKCARGGIKDVEETYFWEDKWVVDRPLYAMFPHLYHLSSMKNHFVVDVLD-----------PSGSSMSS

Query:  FGF--SRPLFDKETRDILALLSFIGEVIHGRGNTLDW--LSRKLPTQ---------IGLFCCILCRMVEEDLDHILWSCDFARSIWNSVFEYLE
        +    +R L D  T D+    +     I  + N   W  +  KLPT+         +G   C +C    E ++HI +SC+ A+ +W+   ++ E
Subjt:  FGF--SRPLFDKETRDILALLSFIGEVIHGRGNTLDW--LSRKLPTQ---------IGLFCCILCRMVEEDLDHILWSCDFARSIWNSVFEYLE

KAA0067918.1 hypothetical protein E6C27_scaffold138G00850 [Cucumis melo var. makuwa]2.8e-1331.46Show/hide
Query:  CEVGVLPTSYLGLPLGHNSKSITFLNLWWTKCAR------GGIKDVEETYFWEDKWVVDRPLYAMFPHLYHLSSMKNHF-----VVDVLDPSGSSMSSFG
        CEVG  P+ YL LPLG N ++I+F    W    R       GI+     ++   +  +    +   P  + L  +K         +    P+ S  +SF 
Subjt:  CEVGVLPTSYLGLPLGHNSKSITFLNLWWTKCAR------GGIKDVEETYFWEDKWVVDRPLYAMFPHLYHLSSMKNHF-----VVDVLDPSGSSMSSFG

Query:  FSRPLFDKETRDILALLSFIGEVIHGRGNTLDWLSRKLPTQIGLFCCILCRMVEEDLDHILWSCDFARSIWNSVFEYL
               +E R       FI +V+ GR NT+D L RK    +G FCC+LC+  EEDLDH+   C +AR++W+S  + L
Subjt:  FSRPLFDKETRDILALLSFIGEVIHGRGNTLDWLSRKLPTQIGLFCCILCRMVEEDLDHILWSCDFARSIWNSVFEYL

RVW85171.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]9.8e-1126.91Show/hide
Query:  VGCEVGVLPTSYLGLPLGHNSKSITF-----------LNLW-----------------WTKCARGGIKDVEETYFWEDKWVVDRPLYAMFPHLYHLSSMK
        +GC+VG LP++YLGLPLG   K +             L LW                 W  C R  + D     FW+D W  + PL   FP L+  +  +
Subjt:  VGCEVGVLPTSYLGLPLGHNSKSITF-----------LNLW-----------------WTKCARGGIKDVEETYFWEDKWVVDRPLYAMFPHLYHLSSMK

Query:  NHFVVDVLDPSGSSMSSFG-FSRPLFDKETRDILALLSFI--GEVIHGRGNTLDWLSRK------------------------------LPTQIGLFC--
        + +V D  D  G +   +  FSRP  D E   + +LLSF+    +I G  + + W + K                              +PT++G FC  
Subjt:  NHFVVDVLDPSGSSMSSFG-FSRPLFDKETRDILALLSFI--GEVIHGRGNTLDWLSRK------------------------------LPTQIGLFC--

Query:  ---------------------CILCRMVEEDLDHILWSCDFARSIWNSV
                             C LC   EE ++HIL  C  AR +WN V
Subjt:  ---------------------CILCRMVEEDLDHILWSCDFARSIWNSV

RVX21330.1 hypothetical protein CK203_002101 [Vitis vinifera]6.4e-1031.58Show/hide
Query:  VGCEVGVLPTSYLGLPLGHNSKSITF-----------LNLWWTK-CARGG----IKDVEETYFWEDKWVVDRPLYAMFPHLYHLSSMKNHFVVDVLDPSG
        +GC+VG LP++YLGLPLG   KS+             L LW  +  ++GG    I+   +   W+D W  +  +   +P L+ L+  K+ +V D  D  G
Subjt:  VGCEVGVLPTSYLGLPLGHNSKSITF-----------LNLWWTK-CARGG----IKDVEETYFWEDKWVVDRPLYAMFPHLYHLSSMKNHFVVDVLDPSG

Query:  SSMSSF-GFSRPLFDKETRDILALLSFIGEVIHGR---GNTLDWLSRKLPTQIG----LFCCILCRMVEEDLDHILWSCDFARSIWNSVF
                FSRP  D E   +  LLS     + G+    +  D +SR      G    L  C LC   EE +++IL  C  AR +W+ VF
Subjt:  SSMSSF-GFSRPLFDKETRDILALLSFIGEVIHGR---GNTLDWLSRKLPTQIG----LFCCILCRMVEEDLDHILWSCDFARSIWNSVF

TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]4.0e-1233.95Show/hide
Query:  RGGIKDVEETYFWEDKWVVDRPLYAMFPHLYHLSSMKNHFVVDVLDPSGSSMS-SFGFSRPLFDKETRDILALLSFIGEVIH--GRGNTLDW--------
        RGG +D+    F       +RPL  +FP LYHLSS+KNHF+ D L  +G+S S SFGF R L D+ET +++AL+S +       GR +   W        
Subjt:  RGGIKDVEETYFWEDKWVVDRPLYAMFPHLYHLSSMKNHFVVDVLDPSGSSMS-SFGFSRPLFDKETRDILALLSFIGEVIH--GRGNTLDW--------

Query:  --------LSRKLPTQIGLFCCI-----------LCRMVEEDLDHILWSCDFARSIWNSVFE
                L    PT   +   I               VEEDLDH+LW C+    +W+   +
Subjt:  --------LSRKLPTQIGLFCCI-----------LCRMVEEDLDHILWSCDFARSIWNSVFE

TrEMBL top hitse value%identityAlignment
A0A2N9F3M6 zf-RVT domain-containing protein3.1e-1030.77Show/hide
Query:  FLNLWWTKCAR---GGIKDVEETYFWEDKWVVDRPLYAMFPHLYHLSSMKNHFVVDVLDPSGSSM-SSFGFSRPLFDKETRDILALL----SFIGEVIHG
        F+   W K +R     + D     FW+D W  D PL A +P L+ ++ +K+ FVVD     G S+     FSR   D  T    + L    SF      G
Subjt:  FLNLWWTKCAR---GGIKDVEETYFWEDKWVVDRPLYAMFPHLYHLSSMKNHFVVDVLDPSGSSM-SSFGFSRPLFDKETRDILALL----SFIGEVIHG

Query:  RGNTLDWLSRKLPTQIGLFCCILCRMVEEDLDHILWSCDFARSIWNSVFEYLEEL------IGSLLFCW
        R  T D L R+    +  +CC +C+   E +DH+L  C +A+ +W+ VF   E        +  L  CW
Subjt:  RGNTLDWLSRKLPTQIGLFCCILCRMVEEDLDHILWSCDFARSIWNSVFEYLEEL------IGSLLFCW

A0A2N9FHL6 Reverse transcriptase domain-containing protein4.8e-1135.37Show/hide
Query:  FWEDKWVVDRPLYAMFPHLYHLSSMKNHFVVDVLDPSGSSMSSFG---FSRPLFDKETRDILALLS-----------------------FIGEVIHGRGN
        FW D+W  DRPL  +FP LY LS  +N  V +VL P GSS S      F R   D E   + A LS                       F+     GR  
Subjt:  FWEDKWVVDRPLYAMFPHLYHLSSMKNHFVVDVLDPSGSSMSSFG---FSRPLFDKETRDILALLS-----------------------FIGEVIHGRGN

Query:  TLDWLSRKLPTQIGLFCCILCRMVEEDLDHILWSCDFARSIWNSVFE
        T + L +K     G +CC +C+  EE +DH+L  C FAR +W+ VF+
Subjt:  TLDWLSRKLPTQIGLFCCILCRMVEEDLDHILWSCDFARSIWNSVFE

A0A438KJF7 DUF4283 domain-containing protein3.1e-1031.58Show/hide
Query:  VGCEVGVLPTSYLGLPLGHNSKSITF-----------LNLWWTK-CARGG----IKDVEETYFWEDKWVVDRPLYAMFPHLYHLSSMKNHFVVDVLDPSG
        +GC+VG LP++YLGLPLG   KS+             L LW  +  ++GG    I+   +   W+D W  +  +   +P L+ L+  K+ +V D  D  G
Subjt:  VGCEVGVLPTSYLGLPLGHNSKSITF-----------LNLWWTK-CARGG----IKDVEETYFWEDKWVVDRPLYAMFPHLYHLSSMKNHFVVDVLDPSG

Query:  SSMSSF-GFSRPLFDKETRDILALLSFIGEVIHGR---GNTLDWLSRKLPTQIG----LFCCILCRMVEEDLDHILWSCDFARSIWNSVF
                FSRP  D E   +  LLS     + G+    +  D +SR      G    L  C LC   EE +++IL  C  AR +W+ VF
Subjt:  SSMSSF-GFSRPLFDKETRDILALLSFIGEVIHGR---GNTLDWLSRKLPTQIG----LFCCILCRMVEEDLDHILWSCDFARSIWNSVF

A0A5A7VJE4 zf-RVT domain-containing protein1.3e-1331.46Show/hide
Query:  CEVGVLPTSYLGLPLGHNSKSITFLNLWWTKCAR------GGIKDVEETYFWEDKWVVDRPLYAMFPHLYHLSSMKNHF-----VVDVLDPSGSSMSSFG
        CEVG  P+ YL LPLG N ++I+F    W    R       GI+     ++   +  +    +   P  + L  +K         +    P+ S  +SF 
Subjt:  CEVGVLPTSYLGLPLGHNSKSITFLNLWWTKCAR------GGIKDVEETYFWEDKWVVDRPLYAMFPHLYHLSSMKNHF-----VVDVLDPSGSSMSSFG

Query:  FSRPLFDKETRDILALLSFIGEVIHGRGNTLDWLSRKLPTQIGLFCCILCRMVEEDLDHILWSCDFARSIWNSVFEYL
               +E R       FI +V+ GR NT+D L RK    +G FCC+LC+  EEDLDH+   C +AR++W+S  + L
Subjt:  FSRPLFDKETRDILALLSFIGEVIHGRGNTLDWLSRKLPTQIGLFCCILCRMVEEDLDHILWSCDFARSIWNSVFEYL

A0A5D3CI74 Calpain-type cysteine protease DEK11.9e-1233.95Show/hide
Query:  RGGIKDVEETYFWEDKWVVDRPLYAMFPHLYHLSSMKNHFVVDVLDPSGSSMS-SFGFSRPLFDKETRDILALLSFIGEVIH--GRGNTLDW--------
        RGG +D+    F       +RPL  +FP LYHLSS+KNHF+ D L  +G+S S SFGF R L D+ET +++AL+S +       GR +   W        
Subjt:  RGGIKDVEETYFWEDKWVVDRPLYAMFPHLYHLSSMKNHFVVDVLDPSGSSMS-SFGFSRPLFDKETRDILALLSFIGEVIH--GRGNTLDW--------

Query:  --------LSRKLPTQIGLFCCI-----------LCRMVEEDLDHILWSCDFARSIWNSVFE
                L    PT   +   I               VEEDLDH+LW C+    +W+   +
Subjt:  --------LSRKLPTQIGLFCCI-----------LCRMVEEDLDHILWSCDFARSIWNSVFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G60720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein7.3e-0437.5Show/hide
Query:  WLSR--KLPTQ--------IGLFCCILCRMVEEDLDHILWSCDFARSIWNSVFEYL
        W+S+  +LPT+        I  F C LC +  E  DH+L+SC+FA  +W   F  L
Subjt:  WLSR--KLPTQ--------IGLFCCILCRMVEEDLDHILWSCDFARSIWNSVFEYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGTTGTGAGGTTGGGGTGCTTCCTACCTCTTACTTAGGCCTCCCTCTCGGGCATAACTCGAAATCCATCACCTTCTTGAACCTGTGGTGGACAAAGTGTGCAAG
AGGTGGAATTAAAGATGTCGAGGAGACGTATTTTTGGGAGGATAAATGGGTGGTGGATAGACCCCTCTATGCTATGTTTCCTCATTTATATCATTTGTCTTCAATGAAGA
ATCATTTTGTGGTTGATGTTCTAGACCCTTCTGGGAGCTCTATGTCCTCTTTTGGCTTTTCTCGGCCACTTTTCGATAAGGAAACAAGGGACATTCTGGCCCTCTTATCT
TTCATTGGAGAGGTCATCCATGGAAGAGGTAATACTCTTGATTGGCTTTCGAGGAAGTTGCCTACCCAGATTGGACTGTTTTGTTGTATTCTCTGTCGGATGGTGGAGGA
AGACCTCGACCATATTCTTTGGAGTTGTGACTTTGCTCGTTCTATTTGGAATTCGGTCTTTGAGTACTTGGAGGAACTCATTGGATCACTTCTCTTTTGTTGGGTTACTT
GTGGTGTAAGCTTACCTGCACTTATTGAGCATGGGATGCCTTCAAAATCTGATCATACGCAGGGATCGCTAATCCTAAAGCAAGCAAGGAGTGAGGTTCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGTTGTGAGGTTGGGGTGCTTCCTACCTCTTACTTAGGCCTCCCTCTCGGGCATAACTCGAAATCCATCACCTTCTTGAACCTGTGGTGGACAAAGTGTGCAAG
AGGTGGAATTAAAGATGTCGAGGAGACGTATTTTTGGGAGGATAAATGGGTGGTGGATAGACCCCTCTATGCTATGTTTCCTCATTTATATCATTTGTCTTCAATGAAGA
ATCATTTTGTGGTTGATGTTCTAGACCCTTCTGGGAGCTCTATGTCCTCTTTTGGCTTTTCTCGGCCACTTTTCGATAAGGAAACAAGGGACATTCTGGCCCTCTTATCT
TTCATTGGAGAGGTCATCCATGGAAGAGGTAATACTCTTGATTGGCTTTCGAGGAAGTTGCCTACCCAGATTGGACTGTTTTGTTGTATTCTCTGTCGGATGGTGGAGGA
AGACCTCGACCATATTCTTTGGAGTTGTGACTTTGCTCGTTCTATTTGGAATTCGGTCTTTGAGTACTTGGAGGAACTCATTGGATCACTTCTCTTTTGTTGGGTTACTT
GTGGTGTAAGCTTACCTGCACTTATTGAGCATGGGATGCCTTCAAAATCTGATCATACGCAGGGATCGCTAATCCTAAAGCAAGCAAGGAGTGAGGTTCTGTAA
Protein sequenceShow/hide protein sequence
MVGCEVGVLPTSYLGLPLGHNSKSITFLNLWWTKCARGGIKDVEETYFWEDKWVVDRPLYAMFPHLYHLSSMKNHFVVDVLDPSGSSMSSFGFSRPLFDKETRDILALLS
FIGEVIHGRGNTLDWLSRKLPTQIGLFCCILCRMVEEDLDHILWSCDFARSIWNSVFEYLEELIGSLLFCWVTCGVSLPALIEHGMPSKSDHTQGSLILKQARSEVL