CuGenDBv2

Gene ID	Spg022159
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Selenoprotein O
Genome location	scaffold2:11647851..11649263
RNA-Seq Expression	Spg022159
Synteny	Spg022159
Gene Ontology terms	GO:0005524 - ATP binding (molecular function) GO:0016779 - nucleotidyltransferase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR003846 - Protein adenylyltransferase SelO

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6590231.1 hypothetical protein SDJN03_15654, partial [Cucurbita argyrosperma subsp. sororia]

3.4e-52

82.48

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Query:  MSLLSHLFPKLSLLPHISLPCHG--HRLGLVRCRSSLLI-RRPSTSLVSPPSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDGGS
        MSL+SHLFPKLSLLPHISL CHG  HRLGLVR  S+ LI RRP  S+ SPPSPL GHSRHGRRRVSMDSASPEVSASVDSVA+GLKNQSLNSDDRG  GS
Subjt:  MSLLSHLFPKLSLLPHISLPCHG--HRLGLVRCRSSLLI-RRPSTSLVSPPSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDGGS

Query:  SVEHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL
         VEH AKKKLE+LNWDNSFVRELPGDPRTD++PR++L
Subjt:  SVEHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL

XP_022960705.1 uncharacterized protein LOC111461421 [Cucurbita moschata]

2.9e-51

81.75

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Query:  MSLLSHLFPKLSLLPHISLPCHG--HRLGLVRCRSSLLI-RRPSTSLVSPPSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDGGS
        MSL+SHLFPKLSLLPHISL CHG  HRLGLVR  S+ LI RRP  S+ S PSPL GHSRHGRRRVSMDSASPEVSASVDSVA+GLKNQSLNSDDRG  GS
Subjt:  MSLLSHLFPKLSLLPHISLPCHG--HRLGLVRCRSSLLI-RRPSTSLVSPPSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDGGS

Query:  SVEHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL
         VEH AKKKLE+LNWDNSFVRELPGDPRTD++PR++L
Subjt:  SVEHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL

XP_022988044.1 uncharacterized protein LOC111485404 [Cucurbita maxima]

6.4e-51

81.02

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Query:  MSLLSHLFPKLSLLPHISLPCHG--HRLGLVRCRSSLLI-RRPSTSLVSPPSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDGGS
        MSL+SHLFPKLSLLPHISL C+G  HRLGLVR  S+ LI RRP  ++ SPPSPL GHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQ+LNSDDRG  GS
Subjt:  MSLLSHLFPKLSLLPHISLPCHG--HRLGLVRCRSSLLI-RRPSTSLVSPPSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDGGS

Query:  SVEHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL
         VEH A+KKLE+LNWDNSFVRELPGDPRTD+IPR++L
Subjt:  SVEHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL

XP_023516247.1 uncharacterized protein LOC111780158 [Cucurbita pepo subsp. pepo]

4.9e-51

80.58

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Query:  MSLLSHLFPKLSLLPHISLPCHG----HRLGLVRCRSSLLI-RRPSTSLVSPPSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDG
        MSL+SHLFPKLSLLPHISL CHG    HRLGLVR  S+ LI RR   S+ SPPSPL GHSRHGRRRVSMDSASPEVSASVDSVA+GLKNQSLNSDDRG  
Subjt:  MSLLSHLFPKLSLLPHISLPCHG----HRLGLVRCRSSLLI-RRPSTSLVSPPSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDG

Query:  GSSVEHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL
        GS VEH AKKKLE+LNWDNSFVRELPGDPRTD++PR++L
Subjt:  GSSVEHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL

XP_038878878.1 protein adenylyltransferase SelO [Benincasa hispida]

2.7e-57

88.89

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Query:  MSLLSHLFPKLSLLPHISLPCHGHRLGLVRCRSSLLI-RRPSTSLVSPPSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDGGSSV
        MSL+SHLFPKLS+LPHISL CHGHRLGLVR RS+LLI RRP  S +SPPSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSD+ GDGGSSV
Subjt:  MSLLSHLFPKLSLLPHISLPCHGHRLGLVRCRSSLLI-RRPSTSLVSPPSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDGGSSV

Query:  EHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL
        +HEAKKKLEDLNWDNSFVRELPGDPR DIIPRE+L
Subjt:  EHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LXE5 Selenoprotein O

1.5e-50

80.74

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Query:  MSLLSHLFPKLSLLPHISLPCHGHRLGLVRCRSSLLIRR-PSTSLVSPPSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDGGSSV
        MSL+SHLFPK S+  +ISL CHGHRLGLVR RS+LLIRR P  S  S PSPL  HSRHGRR++SMDSASPEVSASVDSVAEGLKNQSLN+DDR DGGSS+
Subjt:  MSLLSHLFPKLSLLPHISLPCHGHRLGLVRCRSSLLIRR-PSTSLVSPPSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDGGSSV

Query:  EHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL
         H  KKKLEDLNWDNSFVRELPGDPRTDIIPRE+L
Subjt:  EHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL

A0A5D3DUC9 Selenoprotein O

2.2e-49

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Query:  MSLLSHLFPKLSLLPHISLPCHGHRLGLVRCRSSLLIRRPS-TSLVSPPSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDGGSSV
        MSL+SHLFPK S+  +ISL CHGHRLGLV  RS+LLIRR S +S  S PSPL  HSRHGRR++SMDSASPEVSASVDSVAEGLKNQSLN+DDR DGGSS+
Subjt:  MSLLSHLFPKLSLLPHISLPCHGHRLGLVRCRSSLLIRRPS-TSLVSPPSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDGGSSV

Query:  EHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL
         H  KKKLEDLNWDNSFVRELPGDPRTDIIPRE+L
Subjt:  EHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL

A0A6J1DIN2 Selenoprotein O

1.9e-48

80.15

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Query:  MSLLSHLFPKLSLLPHISLPCHGHRLGLVRCRSSLLIRRPSTSLVSPPSPLAGHSRHGRRRVSMDSASPE--VSASVDSVAEGLKNQSLNSDDRGDGGSS
        MSL SH FPKLSLLPHISL CHGHRLGLVR  SSLLIR  S+SLVSPP PLAGH  H RRRVSMDSASPE  VS SVDSVA+ LKNQSLNSDD    GSS
Subjt:  MSLLSHLFPKLSLLPHISLPCHGHRLGLVRCRSSLLIRRPSTSLVSPPSPLAGHSRHGRRRVSMDSASPE--VSASVDSVAEGLKNQSLNSDDRGDGGSS

Query:  VEHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL
        ++++ KKKLEDLNWDNSFVRELPGDPRTDIIPRE+L
Subjt:  VEHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL

A0A6J1H9V3 Selenoprotein O

1.4e-51

81.75

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Query:  MSLLSHLFPKLSLLPHISLPCHG--HRLGLVRCRSSLLI-RRPSTSLVSPPSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDGGS
        MSL+SHLFPKLSLLPHISL CHG  HRLGLVR  S+ LI RRP  S+ S PSPL GHSRHGRRRVSMDSASPEVSASVDSVA+GLKNQSLNSDDRG  GS
Subjt:  MSLLSHLFPKLSLLPHISLPCHG--HRLGLVRCRSSLLI-RRPSTSLVSPPSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDGGS

Query:  SVEHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL
         VEH AKKKLE+LNWDNSFVRELPGDPRTD++PR++L
Subjt:  SVEHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL

A0A6J1JKI6 Selenoprotein O

3.1e-51

81.02

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Query:  MSLLSHLFPKLSLLPHISLPCHG--HRLGLVRCRSSLLI-RRPSTSLVSPPSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDGGS
        MSL+SHLFPKLSLLPHISL C+G  HRLGLVR  S+ LI RRP  ++ SPPSPL GHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQ+LNSDDRG  GS
Subjt:  MSLLSHLFPKLSLLPHISLPCHG--HRLGLVRCRSSLLI-RRPSTSLVSPPSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDGGS

Query:  SVEHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL
         VEH A+KKLE+LNWDNSFVRELPGDPRTD+IPR++L
Subjt:  SVEHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G13030.1 unknown protein

2.3e-14

43.69

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Query:  PSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDGGSSVEHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL------LSDEIDF
        PS  +   R      S  S +P   +S DS+A+ L+NQSL + D G        + KKKLED NWD+SFV+ELPGDPRTD+I RE+L      +S  ++ 
Subjt:  PSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDGGSSVEHEAKKKLEDLNWDNSFVRELPGDPRTDIIPRELL------LSDEIDF

Query:  EDP
        +DP
Subjt:  EDP

Sequences

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CDS sequence

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ATGTCATTGCTTTCACATCTCTTCCCCAAGCTCTCGCTGCTTCCCCACATTTCTCTCCCCTGCCATGGCCACCGCCTCGGCTTAGTTCGGTGCCGTTCCTCTCTCCTCAT
TCGCCGCCCTTCTACCTCTCTCGTCTCTCCGCCTTCACCACTCGCCGGCCACTCTCGCCACGGCCGCCGGAGAGTTTCCATGGACTCTGCTTCACCGGAGGTTTCGGCGT
CGGTCGACTCCGTGGCGGAGGGTTTGAAGAATCAGAGCTTGAACAGCGACGATCGTGGCGATGGAGGCAGTAGCGTCGAGCACGAGGCGAAAAAGAAGCTCGAAGATCTG
AACTGGGACAATTCCTTTGTTAGAGAGCTGCCTGGCGATCCCCGTACTGATATCATTCCTCGGGAGTTACTTCTCAGTGATGAAATTGATTTTGAGGATCCGGGTTGCCA
ATCTCAATCTCCTGGGTATCAAGGTGTTCCTTTCCAAGGAGGCGTCATTGGTCTGTGGCCATCTGGTTGGGCTGCTTTAGCCTCGATCGGCATTCAGGTGACCCCGACTA
AGGAGGATCCTGCGAATTCTACAGAACCTCTAGATGTCCCTAAGAAAGATAACCAATCTCGTCAAGGTAAGAGGAAGGGGGGAACCAATAAGATGGACAGAGAGCTTAAG
AAATTGACGAGCTCAGTGAACTATGACCGAAATAAAGCTTTGAAGGAAGCGGGGGATATCAAGGTTATTAAATGA

mRNA sequence

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Protein sequence

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MSLLSHLFPKLSLLPHISLPCHGHRLGLVRCRSSLLIRRPSTSLVSPPSPLAGHSRHGRRRVSMDSASPEVSASVDSVAEGLKNQSLNSDDRGDGGSSVEHEAKKKLEDL
NWDNSFVRELPGDPRTDIIPRELLLSDEIDFEDPGCQSQSPGYQGVPFQGGVIGLWPSGWAALASIGIQVTPTKEDPANSTEPLDVPKKDNQSRQGKRKGGTNKMDRELK
KLTSSVNYDRNKALKEAGDIKVIK

Spg022159 (gene) of Sponge gourd (cylindrica) v1 genome