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Spg022169 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022169
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L30
Genome locationscaffold2:10998192..11000031
RNA-Seq ExpressionSpg022169
SyntenySpg022169
Gene Ontology termsGO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000231 - Ribosomal protein L30e
IPR004038 - Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR022991 - Ribosomal protein L30e, conserved site
IPR029064 - 50S ribosomal protein L30e-like
IPR039109 - Ribosomal protein L30/YlxQ


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8039682.1 hypothetical protein BT93_B2023 [Corymbia citriodora subsp. variegata]3.4e-5597.3Show/hide
Query:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
        MV AKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKL+IIANNCPPLRKSEIEYYAMLAKVGVHHYNG+NVDLGTACGKYYRVCCLSIIDPG
Subjt:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG

Query:  DSDIIKSMPGE
        DSDIIKSMPGE
Subjt:  DSDIIKSMPGE

KAG6590249.1 60S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia]2.6e-5598.2Show/hide
Query:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
        MV AKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
Subjt:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG

Query:  DSDIIKSMPGE
        DSDIIKS+PGE
Subjt:  DSDIIKSMPGE

XP_022157366.1 60S ribosomal protein L30 [Momordica charantia]3.4e-5598.2Show/hide
Query:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
        MV AKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
Subjt:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG

Query:  DSDIIKSMPGE
        DSDIIKS+PGE
Subjt:  DSDIIKSMPGE

XP_022960585.1 60S ribosomal protein L30-like [Cucurbita moschata]8.8e-5698.21Show/hide
Query:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
        MV AKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
Subjt:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG

Query:  DSDIIKSMPGES
        DSDIIKS+PGES
Subjt:  DSDIIKSMPGES

XP_038878626.1 60S ribosomal protein L30 [Benincasa hispida]4.0e-5699.11Show/hide
Query:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
        MV AKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
Subjt:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG

Query:  DSDIIKSMPGES
        DSDIIKSMPGES
Subjt:  DSDIIKSMPGES

TrEMBL top hitse value%identityAlignment
A0A1U8ENE7 60S ribosomal protein L302.8e-5597.3Show/hide
Query:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
        MV AKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNG+NVDLGTACGKYYRVCCLSIIDPG
Subjt:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG

Query:  DSDIIKSMPGE
        DSDIIKSMPG+
Subjt:  DSDIIKSMPGE

A0A3Q7J0N1 Ribosomal_L7Ae domain-containing protein2.8e-5597.3Show/hide
Query:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
        MV AKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNG+NVDLGTACGKYYRVCCLSIIDPG
Subjt:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG

Query:  DSDIIKSMPGE
        DSDIIKSMPG+
Subjt:  DSDIIKSMPGE

A0A6J1DXV1 60S ribosomal protein L301.6e-5598.2Show/hide
Query:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
        MV AKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
Subjt:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG

Query:  DSDIIKSMPGE
        DSDIIKS+PGE
Subjt:  DSDIIKSMPGE

A0A6J1H9H7 60S ribosomal protein L30-like4.3e-5698.21Show/hide
Query:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
        MV AKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
Subjt:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG

Query:  DSDIIKSMPGES
        DSDIIKS+PGES
Subjt:  DSDIIKSMPGES

A0A6J1JJ11 60S ribosomal protein L30-like4.3e-5698.21Show/hide
Query:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
        MV AKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
Subjt:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG

Query:  DSDIIKSMPGES
        DSDIIKS+PGES
Subjt:  DSDIIKSMPGES

SwissProt top hitse value%identityAlignment
O48558 60S ribosomal protein L307.5e-5083.78Show/hide
Query:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
        MV  KKTKK+ ++INN+L LVMKSGKYTLGYKTVL+TLRNSK KL+IIANNCPPLRKSEIEYYAMLAKV VHH++G+NVDLGTACGKY+RVCCLSIIDPG
Subjt:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG

Query:  DSDIIKSMPGE
        DSDIIK+ PGE
Subjt:  DSDIIKSMPGE

O49884 60S ribosomal protein L305.4e-5692.79Show/hide
Query:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
        MV AKKTKKTHESINNRLALVMKSGKYTLGYKTVLK+LR+SKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNG+NVDLGTACGKYYRVCCLSI+DPG
Subjt:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG

Query:  DSDIIKSMPGE
        DSDIIK++PG+
Subjt:  DSDIIKSMPGE

Q8VZ19 60S ribosomal protein L30-26.8e-5184.68Show/hide
Query:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
        MVT KKTKK+HE IN+RLALVMKSGKYTLGYK+VLK+LR SKGKLI+I+ NCPPLR+SEIEYYAMLAKVGVHHYNG+NVDLGTACGKY+RV CLSI+DPG
Subjt:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG

Query:  DSDIIKSMPGE
        DSDIIKS+PG+
Subjt:  DSDIIKSMPGE

Q9C8F7 Putative 60S ribosomal protein L30-12.6e-5083.78Show/hide
Query:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
        MV AKKTKK+HE IN+RLALVMKSGKYTLGYK+VLK+LR+SKGKLI+I++NCPPLR+SEIEYYAMLAKVGVHHYN +NVDLGTACGKY+RV CLSI+DPG
Subjt:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG

Query:  DSDIIKSMPGE
        DSDIIKS+PG+
Subjt:  DSDIIKSMPGE

Q9M5M6 60S ribosomal protein L304.3e-5389.19Show/hide
Query:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
        MV AKKTKKTHESIN+RLALVMKSGK+TLGYKTVL++LR++KGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNG+NVDLGTACGKY+RVCCLSIID G
Subjt:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG

Query:  DSDIIKSMPGE
        DSDIIKS+PG+
Subjt:  DSDIIKSMPGE

Arabidopsis top hitse value%identityAlignment
AT1G36240.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein1.8e-5183.78Show/hide
Query:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
        MV AKKTKK+HE IN+RLALVMKSGKYTLGYK+VLK+LR+SKGKLI+I++NCPPLR+SEIEYYAMLAKVGVHHYN +NVDLGTACGKY+RV CLSI+DPG
Subjt:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG

Query:  DSDIIKSMPGE
        DSDIIKS+PG+
Subjt:  DSDIIKSMPGE

AT1G77940.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein4.8e-5284.68Show/hide
Query:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
        MVT KKTKK+HE IN+RLALVMKSGKYTLGYK+VLK+LR SKGKLI+I+ NCPPLR+SEIEYYAMLAKVGVHHYNG+NVDLGTACGKY+RV CLSI+DPG
Subjt:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG

Query:  DSDIIKSMPGE
        DSDIIKS+PG+
Subjt:  DSDIIKSMPGE

AT3G18740.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein5.9e-5081.08Show/hide
Query:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG
        MV  KK KK+HE IN+RLALVMKSGKYTLGYK+VLK+LR+SKGKLI+I++NCPPLR+SEIEYYAMLAKVGVH YNG+NVDLGTACGKY+RV CLSI+DPG
Subjt:  MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPG

Query:  DSDIIKSMPGE
        DSDIIK++PG+
Subjt:  DSDIIKSMPGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGACCGCAAAGAAGACGAAGAAGACCCATGAGAGCATCAATAACAGGCTCGCTCTCGTCATGAAGAGTGGGAAGTATACCTTGGGATACAAAACCGTTCTCAAGAC
CTTGAGGAACTCTAAAGGTAAGCTGATCATCATTGCCAACAACTGCCCTCCACTCCGAAAGTCCGAGATCGAGTATTATGCAATGTTGGCAAAGGTTGGAGTTCACCATT
ACAACGGAAGCAATGTAGACCTTGGGACCGCTTGTGGCAAATACTACAGAGTATGCTGCCTCAGCATTATCGATCCTGGTGATTCCGATATCATCAAGAGCATGCCTGGA
GAAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGACCGCAAAGAAGACGAAGAAGACCCATGAGAGCATCAATAACAGGCTCGCTCTCGTCATGAAGAGTGGGAAGTATACCTTGGGATACAAAACCGTTCTCAAGAC
CTTGAGGAACTCTAAAGGTAAGCTGATCATCATTGCCAACAACTGCCCTCCACTCCGAAAGTCCGAGATCGAGTATTATGCAATGTTGGCAAAGGTTGGAGTTCACCATT
ACAACGGAAGCAATGTAGACCTTGGGACCGCTTGTGGCAAATACTACAGAGTATGCTGCCTCAGCATTATCGATCCTGGTGATTCCGATATCATCAAGAGCATGCCTGGA
GAAAGTTAG
Protein sequenceShow/hide protein sequence
MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSMPG
ES