; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022170 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022170
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L31
Genome locationscaffold2:8164618..8166074
RNA-Seq ExpressionSpg022170
SyntenySpg022170
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000054 - Ribosomal protein L31e
IPR020052 - Ribosomal protein L31e, conserved site
IPR023621 - Ribosomal protein L31e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589975.1 60S ribosomal protein L31, partial [Cucurbita argyrosperma subsp. sororia]3.9e-4195.83Show/hide
Query:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
        L+  TFKKKAPKAIKEIRKFAE AMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Subjt:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED

XP_004141039.1 60S ribosomal protein L31 [Cucumis sativus]2.3e-4195.83Show/hide
Query:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
        L+  TFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI+EED
Subjt:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED

XP_008450816.1 PREDICTED: 60S ribosomal protein L31 [Cucumis melo]3.9e-4195.83Show/hide
Query:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
        L+  TFKKKAPKAIKEIRKFAE AMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Subjt:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED

XP_023521644.1 60S ribosomal protein L31-like [Cucurbita pepo subsp. pepo]1.4e-4396.97Show/hide
Query:  TGNLNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
        T  LNDSTFKKKAPKAIKEIRKFAE AMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Subjt:  TGNLNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED

XP_023531866.1 60S ribosomal protein L31-like [Cucurbita pepo subsp. pepo]7.8e-4296.88Show/hide
Query:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
        L+  TFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Subjt:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED

TrEMBL top hitse value%identityAlignment
A0A0A0LIN9 Uncharacterized protein1.1e-4195.83Show/hide
Query:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
        L+  TFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI+EED
Subjt:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED

A0A1S3BR53 60S ribosomal protein L311.9e-4195.83Show/hide
Query:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
        L+  TFKKKAPKAIKEIRKFAE AMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Subjt:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED

A0A5D3CFU7 60S ribosomal protein L311.9e-4195.83Show/hide
Query:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
        L+  TFKKKAPKAIKEIRKFAE AMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Subjt:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED

A0A6J1EIQ4 60S ribosomal protein L311.9e-4195.83Show/hide
Query:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
        L+  TFKKKAPKAIKEIRKFAE AMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Subjt:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED

A0A6J1JK56 60S ribosomal protein L31-like4.2e-4194.79Show/hide
Query:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
        L+  TFKKKAPKAIKEIRKFAE AMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EIPAEGLKGLGTKVIDEED
Subjt:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED

SwissProt top hitse value%identityAlignment
P46290 60S ribosomal protein L311.2e-4087.5Show/hide
Query:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
        L+  TFKKKAP AIKEIRKFA+ AMGTKDVRVDVKLNK IWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTVAEIPA+GLKGLGTK+I++ED
Subjt:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED

P51420 60S ribosomal protein L31-31.7e-3986.46Show/hide
Query:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
        L+  TFKKKAPKAIKEIRKFAE AMGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVI+EED
Subjt:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED

Q9M573 60S ribosomal protein L311.2e-4089.58Show/hide
Query:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
        L+  TFKKKAPKAIKEIRKFA+ AMGT DVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIP  GLKGLGT+VIDEE+
Subjt:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED

Q9MAV7 60S ribosomal protein L319.3e-3883.33Show/hide
Query:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
        L+  TFKKKAP AIKEIRKFA+ AMGTKDVRVDVKLNK IWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTVA+IPA  LKGLG ++I+E+D
Subjt:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED

Q9STR1 60S ribosomal protein L31-26.5e-3984.38Show/hide
Query:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
        L+  TFKKKAPKAIKEIRKFAE  MGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTK+I+EED
Subjt:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED

Arabidopsis top hitse value%identityAlignment
AT2G19740.1 Ribosomal protein L31e family protein8.6e-3983.33Show/hide
Query:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
        L+  TFKKKAP AIKEIRKFA  AMGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVI+EE+
Subjt:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED

AT4G26230.1 Ribosomal protein L31e family protein4.6e-4084.38Show/hide
Query:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
        L+  TFKKKAPKAIKEIRKFAE  MGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTK+I+EED
Subjt:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED

AT5G56710.1 Ribosomal protein L31e family protein1.2e-4086.46Show/hide
Query:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
        L+  TFKKKAPKAIKEIRKFAE AMGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVI+EED
Subjt:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED

AT5G56710.2 Ribosomal protein L31e family protein2.9e-1856.25Show/hide
Query:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
        L+  TFKKKAPKAIKEIRKFAE AMGTKDVRVD                                  EE +SLVTVAEIPAEGL GLGTKVI+EED
Subjt:  LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAAAACACATCGATAAATTGGTACGAGGCTGAAACTAGGGTTTTGTGTACCAATCTTATTGTACCCTTTCGTCTTCACTTCACGCCTGCTGCATCGCTTCAAAC
CCTCCCAAGGTCTAATCGAAGAAGCCGACTGCAGATATGGTTGAGAAAACGAAGGGGAGGAAGGAGGAGGTGGTCACCAGAGAGTATACCATCAACCTACACAAGCGTCT
GCATGGCTGTTCTTTCCCCTCATTGTATCAGTAGCACATCCAATTTCAATCTTGAATTGTTGGATTTTGTATCTGTAACAACTCTCCAGTTCTCATGCTTTACTGGAAAT
CTAAATGACAGTACCTTCAAGAAGAAGGCTCCTAAGGCCATCAAGGAGATAAGGAAGTTTGCAGAGAACGCAATGGGAACAAAGGATGTCAGGGTGGACGTGAAACTGAA
CAAGCATATTTGGAGCAGAGGAATTCGAAGTGTTCCAAGGAGAATTAGAGTTCGCATTGCACGCAAGAGGAATGACGACGAAGATGCAAAGGAAGAACTATATTCTCTTG
TTACCGTTGCAGAAATCCCAGCAGAAGGTTTGAAAGGATTAGGGACTAAGGTCATCGATGAAGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCAAAACACATCGATAAATTGGTACGAGGCTGAAACTAGGGTTTTGTGTACCAATCTTATTGTACCCTTTCGTCTTCACTTCACGCCTGCTGCATCGCTTCAAAC
CCTCCCAAGGTCTAATCGAAGAAGCCGACTGCAGATATGGTTGAGAAAACGAAGGGGAGGAAGGAGGAGGTGGTCACCAGAGAGTATACCATCAACCTACACAAGCGTCT
GCATGGCTGTTCTTTCCCCTCATTGTATCAGTAGCACATCCAATTTCAATCTTGAATTGTTGGATTTTGTATCTGTAACAACTCTCCAGTTCTCATGCTTTACTGGAAAT
CTAAATGACAGTACCTTCAAGAAGAAGGCTCCTAAGGCCATCAAGGAGATAAGGAAGTTTGCAGAGAACGCAATGGGAACAAAGGATGTCAGGGTGGACGTGAAACTGAA
CAAGCATATTTGGAGCAGAGGAATTCGAAGTGTTCCAAGGAGAATTAGAGTTCGCATTGCACGCAAGAGGAATGACGACGAAGATGCAAAGGAAGAACTATATTCTCTTG
TTACCGTTGCAGAAATCCCAGCAGAAGGTTTGAAAGGATTAGGGACTAAGGTCATCGATGAAGAAGATTGA
Protein sequenceShow/hide protein sequence
MDQNTSINWYEAETRVLCTNLIVPFRLHFTPAASLQTLPRSNRRSRLQIWLRKRRGGRRRWSPESIPSTYTSVCMAVLSPHCISSTSNFNLELLDFVSVTTLQFSCFTGN
LNDSTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED