; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022183 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022183
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionvacuolar protein sorting-associated protein 27-like isoform X2
Genome locationscaffold2:9903708..9904844
RNA-Seq ExpressionSpg022183
SyntenySpg022183
Gene Ontology termsGO:0006623 - protein targeting to vacuole (biological process)
GO:0043328 - protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway (biological process)
GO:0033565 - ESCRT-0 complex (cellular component)
GO:0032266 - phosphatidylinositol-3-phosphate binding (molecular function)
GO:0043130 - ubiquitin binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588113.1 Rabankyrin-5, partial [Cucurbita argyrosperma subsp. sororia]1.5e-0688.57Show/hide
Query:  NLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE
        N A+ESRINYEAS EGLREAIKNGDTHAV+KLLSE
Subjt:  NLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE
XP_022929532.1 vacuolar protein sorting-associated protein 27-like isoform X1 [Cucurbita moschata]1.5e-0688.57Show/hide
Query:  NLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE
        N A+ESRINYEAS EGLREAIKNGDTHAV+KLLSE
Subjt:  NLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE
XP_022929548.1 vacuolar protein sorting-associated protein 27-like isoform X2 [Cucurbita moschata]1.5e-0688.57Show/hide
Query:  NLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE
        N A+ESRINYEAS EGLREAIKNGDTHAV+KLLSE
Subjt:  NLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE
XP_022929552.1 potassium channel KOR2-like isoform X3 [Cucurbita moschata]1.5e-0688.57Show/hide
Query:  NLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE
        N A+ESRINYEAS EGLREAIKNGDTHAV+KLLSE
Subjt:  NLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE
XP_038878461.1 vacuolar protein sorting-associated protein 27 [Benincasa hispida]4.4e-0688.57Show/hide
Query:  NLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE
        NLA+ESRINYEAS EGLREAIKNGDT AV+KLLSE
Subjt:  NLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE
TrEMBL top hitse value%identityAlignment
A0A1S4DY61 LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 272.1e-0688.57Show/hide
Query:  NLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE
        NLA+ESRINYEAS EGLREAIKNGDT AV+KLLSE
Subjt:  NLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE
A0A5A7UKZ2 Vacuolar protein sorting-associated protein 272.1e-0688.57Show/hide
Query:  NLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE
        NLA+ESRINYEAS EGLREAIKNGDT AV+KLLSE
Subjt:  NLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE
A0A6J1EN28 potassium channel KOR2-like isoform X37.3e-0788.57Show/hide
Query:  NLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE
        N A+ESRINYEAS EGLREAIKNGDTHAV+KLLSE
Subjt:  NLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE
A0A6J1ESF6 vacuolar protein sorting-associated protein 27-like isoform X27.3e-0788.57Show/hide
Query:  NLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE
        N A+ESRINYEAS EGLREAIKNGDTHAV+KLLSE
Subjt:  NLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE
A0A6J1EUN7 vacuolar protein sorting-associated protein 27-like isoform X17.3e-0788.57Show/hide
Query:  NLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE
        N A+ESRINYEAS EGLREAIKNGDTHAV+KLLSE
Subjt:  NLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G26210.1 Ankyrin repeat family protein7.5e-0470.37Show/hide
Query:  NYEASSEGLREAIKNGDTHAVRKLLSE
        +YEAS EGLREAIKNGD+   +KLL E
Subjt:  NYEASSEGLREAIKNGDTHAVRKLLSE
AT2G26210.2 Ankyrin repeat family protein7.5e-0470.37Show/hide
Query:  NYEASSEGLREAIKNGDTHAVRKLLSE
        +YEAS EGLREAIKNGD+   +KLL E
Subjt:  NYEASSEGLREAIKNGDTHAVRKLLSE
AT2G26210.3 Ankyrin repeat family protein7.5e-0470.37Show/hide
Query:  NYEASSEGLREAIKNGDTHAVRKLLSE
        +YEAS EGLREAIKNGD+   +KLL E
Subjt:  NYEASSEGLREAIKNGDTHAVRKLLSE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCACAGGGCGCTTGCCGCCAGCCCTGCGCGCGCGCGCACTGTCTGTGTCGCGCGCGCGCGCGCTGCTCGTGACCCGCGCGCACGATCGCGCGCGCGCGCCCCGTC
CGTCTGCGCGCCAGCCTGCGCGCGCTTCCAGTCGTCCGTGCGCGCGCCCCTTGCGCACGCTGCCTGCCGCCCGCGCGCGCGCGCCCCTGCCTGCCGTGCGCGTGCGTGCG
GCCTTGCGCCTGCCTGGCGCTGGGCAGCGTCTGGCGCCCCTCTGTGCGCCAGTGCGCCCAGCTGCGCGCCACCTGCGCGTGCTGGGCGTGTCTGCTGGGCGTGGGCAGCA
AGCAACGCCCACTTCGCCCCCTTAGCAGCCACCCTATGCCATCAGTGGCCCTCCTGCCCCTCATGCCTGCCGTGCATGAATCTTGCAGAGGAATCGAGGATTAATTATGA
AGCAAGCAGCGAGGGGTTAAGGGAAGCAATCAAGAATGGCGACACTCATGCTGTCAGGAAACTTTTGAGTGAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGCACAGGGCGCTTGCCGCCAGCCCTGCGCGCGCGCGCACTGTCTGTGTCGCGCGCGCGCGCGCTGCTCGTGACCCGCGCGCACGATCGCGCGCGCGCGCCCCGTC
CGTCTGCGCGCCAGCCTGCGCGCGCTTCCAGTCGTCCGTGCGCGCGCCCCTTGCGCACGCTGCCTGCCGCCCGCGCGCGCGCGCCCCTGCCTGCCGTGCGCGTGCGTGCG
GCCTTGCGCCTGCCTGGCGCTGGGCAGCGTCTGGCGCCCCTCTGTGCGCCAGTGCGCCCAGCTGCGCGCCACCTGCGCGTGCTGGGCGTGTCTGCTGGGCGTGGGCAGCA
AGCAACGCCCACTTCGCCCCCTTAGCAGCCACCCTATGCCATCAGTGGCCCTCCTGCCCCTCATGCCTGCCGTGCATGAATCTTGCAGAGGAATCGAGGATTAATTATGA
AGCAAGCAGCGAGGGGTTAAGGGAAGCAATCAAGAATGGCGACACTCATGCTGTCAGGAAACTTTTGAGTGAG
Protein sequenceShow/hide protein sequence
MAHRALAASPARARTVCVARARAARDPRARSRARAPSVCAPACARFQSSVRAPLAHAACRPRARAPACRARACGLAPAWRWAASGAPLCASAPSCAPPARAGRVCWAWAA
SNAHFAPLAATLCHQWPSCPSCLPCMNLAEESRINYEASSEGLREAIKNGDTHAVRKLLSE