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Spg022272 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022272
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold2:14100241..14101955
RNA-Seq ExpressionSpg022272
SyntenySpg022272
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAAGAAGGTCGAGGAGGGATTGGGTGGCTTGTGCGTGACTCAGACGGATCCCCCGATCTGTTTCGAAATGCTTCAAATTAACAAGAATTGGGCAATCAAGACCAT
GGAAGCGAGAGCAATTCTAGAGGGGATTAAACAAGTTCATAGTACCTGTAATCAGCAATGCATTCCCCTCAAAATAGAATCGGACGCTTTAGAAGTGGTGAAAATTCTCA
ACGGCGATTCAGAAGACCTTTCGAAGACGAAGATCTTCACGGATGAAATCAGAAAAATTGTAGATCGCTCATTTTCCATGGAAATCAGTCACTGTAGTCGCCTTTTGAAC
ACAGCCGCACACCGCAATTTTGGACCGCCCGACGCACAAGGAGCTGACGAGGACGTCCGGGCAAAAATAGGGCTAGGAGTCCGACCCAGAGGAAGAACCGACCAAAGAGC
CGGGCCAACTTGGCCTGACCCATATGGTCGGCCTCGAGGCCGAGGCCGACCATTCGGCCCGCTTGTGCGGGCCGAGCTCGGTCATCTCCTCTCGGTCCCCAATGCCGCTA
GCCGCCTCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGG
TTTTCTCTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGACTCGGAAGCGACCCAGAGGAAGACCAGCCAACGGGCCGG
GCCAAAATGGCCCGACCCATATGGTCAGCCTCGGCCTTGGGCCGAGGCCGAGCATAATGGTCGCCCTCGGCCCAAGCGGGCCGAGTTCGTTTGCATCCGCTCGGTCCCTG
CTATCCCTAGCCGCCCCGGTCCAGCCTGGTTCGTCTCAAAACGCCTCCGAATCCCTAAAAACTCTAGGAGCATGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACACCG
GTGTGCAGGTTTACTCTTTTGCAGGCCACGTCTTCCCCCACTCTCAAACAAATTCACTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAAGAAGGTCGAGGAGGGATTGGGTGGCTTGTGCGTGACTCAGACGGATCCCCCGATCTGTTTCGAAATGCTTCAAATTAACAAGAATTGGGCAATCAAGACCAT
GGAAGCGAGAGCAATTCTAGAGGGGATTAAACAAGTTCATAGTACCTGTAATCAGCAATGCATTCCCCTCAAAATAGAATCGGACGCTTTAGAAGTGGTGAAAATTCTCA
ACGGCGATTCAGAAGACCTTTCGAAGACGAAGATCTTCACGGATGAAATCAGAAAAATTGTAGATCGCTCATTTTCCATGGAAATCAGTCACTGTAGTCGCCTTTTGAAC
ACAGCCGCACACCGCAATTTTGGACCGCCCGACGCACAAGGAGCTGACGAGGACGTCCGGGCAAAAATAGGGCTAGGAGTCCGACCCAGAGGAAGAACCGACCAAAGAGC
CGGGCCAACTTGGCCTGACCCATATGGTCGGCCTCGAGGCCGAGGCCGACCATTCGGCCCGCTTGTGCGGGCCGAGCTCGGTCATCTCCTCTCGGTCCCCAATGCCGCTA
GCCGCCTCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGG
TTTTCTCTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGACTCGGAAGCGACCCAGAGGAAGACCAGCCAACGGGCCGG
GCCAAAATGGCCCGACCCATATGGTCAGCCTCGGCCTTGGGCCGAGGCCGAGCATAATGGTCGCCCTCGGCCCAAGCGGGCCGAGTTCGTTTGCATCCGCTCGGTCCCTG
CTATCCCTAGCCGCCCCGGTCCAGCCTGGTTCGTCTCAAAACGCCTCCGAATCCCTAAAAACTCTAGGAGCATGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACACCG
GTGTGCAGGTTTACTCTTTTGCAGGCCACGTCTTCCCCCACTCTCAAACAAATTCACTGTTGA
Protein sequenceShow/hide protein sequence
MPKKVEEGLGGLCVTQTDPPICFEMLQINKNWAIKTMEARAILEGIKQVHSTCNQQCIPLKIESDALEVVKILNGDSEDLSKTKIFTDEIRKIVDRSFSMEISHCSRLLN
TAAHRNFGPPDAQGADEDVRAKIGLGVRPRGRTDQRAGPTWPDPYGRPRGRGRPFGPLVRAELGHLLSVPNAASRLGFAWFVPKRLRIPKNPRSTSSIGGGVASTTPVCR
FSLLQATSSPSSTNLPLVAREGQDSEATQRKTSQRAGPKWPDPYGQPRPWAEAEHNGRPRPKRAEFVCIRSVPAIPSRPGPAWFVSKRLRIPKNSRSMSSIGGGVASTTP
VCRFTLLQATSSPTLKQIHC