; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022275 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022275
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA-directed RNA polymerase III subunit rpc4
Genome locationscaffold2:8867940..8872154
RNA-Seq ExpressionSpg022275
SyntenySpg022275
Gene Ontology termsGO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR007811 - DNA-directed RNA polymerase III subunit RPC4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147557.1 DNA-directed RNA polymerase III subunit rpc4 [Momordica charantia]1.6e-13778.42Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG
        MEQDPPKNNT AQRKMKFAPKAPPRR+PKPEVKAEI+E+ADAAQA+DLLKRFNEST+R KQK+GKKAAPTQVAFGSGGTS+T+RSYG PKAGNRPRNEDG
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG

Query:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGL
        TLPSS SKEYVEPWDYYSYYP+TLPLRRPYSG+P                                    DSLNEEEFGE SE RTYDE+ TTPAMDLGL
Subjt:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGL

Query:  LEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEG
        LE+N ETN+FFLQ+PPMVPVTKQSSTVE M A++S EQ KGS+ RQ  CSLNELPSGSMGKLLVYRSGAVKLKLG+IVYDVS+GMDCGFAQDVAAINVEG
Subjt:  LEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEG

Query:  KHCCIVGELSKRAILTPDVDSMLKNIEDL
        KHCCIVGELSKRAILTPDVDSMLK+IEDL
Subjt:  KHCCIVGELSKRAILTPDVDSMLKNIEDL

XP_022933797.1 DNA-directed RNA polymerase III subunit RPC4-like [Cucurbita moschata]2.4e-13378.12Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG
        MEQDP KNN AAQRKMKFAPKAPPRRIPK EVKAE+SE ADAAQARDLLKRFNE+T R KQK+GKKAAPTQVAFG+GGTSS+LR+YG  KAGN+ RNEDG
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG

Query:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGL
        TLPS  SKEYVEPWDYYSYYP+TLPLRRPYSGNP                                    DSLNE EFGE SEARTYDENTTTPAMDLGL
Subjt:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGL

Query:  LEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEG
        LEDN ETNIFFLQLPPMVPVT+QSST E M+A+NSLEQ K SQP QKTCSLNE PSGSMGKLLVYRSGAVKLKLGNIVYDVS+GMDCGFAQ++AAINVEG
Subjt:  LEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEG

Query:  KHCCIVGELSKRAILTPDVDSMLKNIEDL
        K CCIVGELSKRA+LTPDVDSMLKNIEDL
Subjt:  KHCCIVGELSKRAILTPDVDSMLKNIEDL

XP_022968121.1 uncharacterized protein LOC111467450 [Cucurbita maxima]3.4e-13276.9Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG
        MEQDP KNN AAQRKMKFAPKAPPRRIPK EVKAE+SE ADAAQARDLLKRFNE+T R KQK+GKKAAPTQVAFG+GGTSS+LR++GF KAGN+ RNEDG
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG

Query:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGL
        TLP   S+EYVEPWDYYSYYP+TLPLRRPYSGNP                                    DSLNE EFGE SE+RTYDENTTTPAMDLGL
Subjt:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGL

Query:  LEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEG
        LEDN ETNIFFLQLPPMVPVT+QSST E M+A+NSLEQ K SQP QKTCSLNE PSGSMGKLLVYRSGAVKLKLG+IVYDVS+GMDCGFAQ++AAINVEG
Subjt:  LEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEG

Query:  KHCCIVGELSKRAILTPDVDSMLKNIEDL
        K CCIVGELSKRA+LTPDVDSMLKNIEDL
Subjt:  KHCCIVGELSKRAILTPDVDSMLKNIEDL

XP_023529312.1 uncharacterized protein LOC111792200 [Cucurbita pepo subsp. pepo]2.3e-13678.12Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG
        MEQDP KNN AAQRKMKFAPKAPPRRIPK EVKAE+SE ADAAQARDLLKRFNE+T R KQK+GKKAAPTQVAFG+GGTSS+LR+YGF KAGN+ +NEDG
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG

Query:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGL
        TLPSST KEYVEPWDYYSYYP+TLPLRRPYSGNP                                    DSLNE EFGE SE+RTYDENTTTPAMDLGL
Subjt:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGL

Query:  LEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEG
        LEDN ETNIFFLQLPPMVPVT+QSST E M+A+NSLEQ KGSQP QKTC+LNE PSGSMGKLLVYRSGAVKLKLGNIVYDVS+GMDCGFAQ++AAINVEG
Subjt:  LEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEG

Query:  KHCCIVGELSKRAILTPDVDSMLKNIEDL
        K CCIVGELSKRA+LTPDVDSMLKNIEDL
Subjt:  KHCCIVGELSKRAILTPDVDSMLKNIEDL

XP_038878504.1 uncharacterized protein LOC120070724 [Benincasa hispida]3.9e-13678.72Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG
        MEQDPPKN TAA RK+KFAPKAP RRIPKPEVKAEI+EDADAAQARDLLKRFNESTLRTKQKIG+KAAPTQVAFGSGGTSSTLRSYG  KAGNRPRNEDG
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG

Query:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGL
        TLPSSTSKEYVEPWDYYSYYP+TLPLRRPYSGNP                                    DSLNEEEFGE SE   YDENTTTPAMDLGL
Subjt:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGL

Query:  LEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEG
        LE+N E ++FFLQLPPMVP+ KQSSTVE   A+NSLEQ KGSQPRQK C +NELPSGSMGKLLVYRSGAVKLKLG+I+YDVS+GMDCGFAQDVAA+NVEG
Subjt:  LEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEG

Query:  KHCCIVGELSKRAILTPDVDSMLKNIEDL
        K CCIVGELSKRAILTPDVDS+LKNIEDL
Subjt:  KHCCIVGELSKRAILTPDVDSMLKNIEDL

TrEMBL top hitse value%identityAlignment
A0A0A0LWX7 Uncharacterized protein1.4e-13175.38Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG
        MEQ+PPKN TAA RK+KFAPKAP RRIPKPEVKAE++EDADAAQARDLLKRFNEST R KQ++G+KAAPTQVAFGSGG+SSTLRSYG  KAGNRPRNEDG
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG

Query:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGL
        TLP+STSKEYVEPWDYYSYYP+TLPLRRPYSGNP                                    DSLNEEEFGE SE  TYDENTTT AM+LGL
Subjt:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGL

Query:  LEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEG
        LE+N E ++ FLQLPPMVP+ KQSS+VE M + NS EQ K SQPRQKTCS+NELPSGS+GKLLVYRSGAVKLKLG+I+YDVS+GMDCGFAQ+VAAINVEG
Subjt:  LEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEG

Query:  KHCCIVGELSKRAILTPDVDSMLKNIEDL
        K CCIVGELSKRAILTPDVDSMLKNIEDL
Subjt:  KHCCIVGELSKRAILTPDVDSMLKNIEDL

A0A1S3BPR1 DNA-directed RNA polymerase III subunit RPC41.2e-13074.77Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG
        MEQDPPKN TA  RK+KFAPKAP RR+PKPEVKAE++ED DAAQARDLLKRFNEST R KQ++G+KAAPTQVAFGSGG+SSTLRSYG  KAGNRPRNEDG
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG

Query:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGL
        TLP+STSKEYVEPWDYYSYYP+TLPLRRPYSGNP                                    DSLNEEEFGE SE  TYDENTTT AM+LGL
Subjt:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGL

Query:  LEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEG
        LE+N ET++FFLQLPPMVP+ KQSSTVE+M + N  EQ   SQ RQKTCS+NELPSGSMGKLLVYRSGAVKLKLG+I+YDVS+GMDCGFAQ+VAAIN+EG
Subjt:  LEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEG

Query:  KHCCIVGELSKRAILTPDVDSMLKNIEDL
        KHCCIVGELSKRAILTPDVDSML+NIEDL
Subjt:  KHCCIVGELSKRAILTPDVDSMLKNIEDL

A0A6J1D2P1 DNA-directed RNA polymerase III subunit rpc47.7e-13878.42Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG
        MEQDPPKNNT AQRKMKFAPKAPPRR+PKPEVKAEI+E+ADAAQA+DLLKRFNEST+R KQK+GKKAAPTQVAFGSGGTS+T+RSYG PKAGNRPRNEDG
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG

Query:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGL
        TLPSS SKEYVEPWDYYSYYP+TLPLRRPYSG+P                                    DSLNEEEFGE SE RTYDE+ TTPAMDLGL
Subjt:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGL

Query:  LEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEG
        LE+N ETN+FFLQ+PPMVPVTKQSSTVE M A++S EQ KGS+ RQ  CSLNELPSGSMGKLLVYRSGAVKLKLG+IVYDVS+GMDCGFAQDVAAINVEG
Subjt:  LEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEG

Query:  KHCCIVGELSKRAILTPDVDSMLKNIEDL
        KHCCIVGELSKRAILTPDVDSMLK+IEDL
Subjt:  KHCCIVGELSKRAILTPDVDSMLKNIEDL

A0A6J1F0U0 DNA-directed RNA polymerase III subunit RPC4-like1.2e-13378.12Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG
        MEQDP KNN AAQRKMKFAPKAPPRRIPK EVKAE+SE ADAAQARDLLKRFNE+T R KQK+GKKAAPTQVAFG+GGTSS+LR+YG  KAGN+ RNEDG
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG

Query:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGL
        TLPS  SKEYVEPWDYYSYYP+TLPLRRPYSGNP                                    DSLNE EFGE SEARTYDENTTTPAMDLGL
Subjt:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGL

Query:  LEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEG
        LEDN ETNIFFLQLPPMVPVT+QSST E M+A+NSLEQ K SQP QKTCSLNE PSGSMGKLLVYRSGAVKLKLGNIVYDVS+GMDCGFAQ++AAINVEG
Subjt:  LEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEG

Query:  KHCCIVGELSKRAILTPDVDSMLKNIEDL
        K CCIVGELSKRA+LTPDVDSMLKNIEDL
Subjt:  KHCCIVGELSKRAILTPDVDSMLKNIEDL

A0A6J1HTZ8 uncharacterized protein LOC1114674501.7e-13276.9Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG
        MEQDP KNN AAQRKMKFAPKAPPRRIPK EVKAE+SE ADAAQARDLLKRFNE+T R KQK+GKKAAPTQVAFG+GGTSS+LR++GF KAGN+ RNEDG
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG

Query:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGL
        TLP   S+EYVEPWDYYSYYP+TLPLRRPYSGNP                                    DSLNE EFGE SE+RTYDENTTTPAMDLGL
Subjt:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGL

Query:  LEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEG
        LEDN ETNIFFLQLPPMVPVT+QSST E M+A+NSLEQ K SQP QKTCSLNE PSGSMGKLLVYRSGAVKLKLG+IVYDVS+GMDCGFAQ++AAINVEG
Subjt:  LEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEG

Query:  KHCCIVGELSKRAILTPDVDSMLKNIEDL
        K CCIVGELSKRA+LTPDVDSMLKNIEDL
Subjt:  KHCCIVGELSKRAILTPDVDSMLKNIEDL

SwissProt top hitse value%identityAlignment
O74857 DNA-directed RNA polymerase III subunit rpc41.7e-0422.29Show/hide
Query:  KFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFG----SGGTSSTLRSYGFPKAGNRPRNEDGTLPSSTSKEYVE
        KF PK  PRR   P  + ++ E        +  K++  S  R K +I K  A    A G    S GT   + S   P    +   +D  L    +    +
Subjt:  KFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFG----SGGTSSTLRSYGFPKAGNRPRNEDGTLPSSTSKEYVE

Query:  PWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETG---LFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTY-------DENTTTPAMD-----
                           G+    V    L+E    E G   + GK   LL+       +   N+E+    +E+  +       DE     A+D     
Subjt:  PWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETG---LFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTY-------DENTTTPAMD-----

Query:  --LGL-----LEDNSETNIFFLQLPPMVP---------------VTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNEL-------PSGSMGKLLVYRSG
          LGL     +ED+ +  +  +Q P  +P                 K+    E  D     +  K  +       L  L       P+G +G L V++SG
Subjt:  --LGL-----LEDNSETNIFFLQLPPMVP---------------VTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNEL-------PSGSMGKLLVYRSG

Query:  AVKLKLGNIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPD
           L++G + + V +G DC F Q++A ++ + K    +G   +R I++PD
Subjt:  AVKLKLGNIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPD

P05423 DNA-directed RNA polymerase III subunit RPC44.2e-0827.48Show/hide
Query:  ETNIFFLQLPPMVP-------VTKQSSTVESMDASNSL---EQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAA
        E  + FLQLP  +P       +    + V+  D    L   E+ + ++  +  C+L +L  G +GKLL+ +SG V+L LG +  DV+ G  C F Q++ +
Subjt:  ETNIFFLQLPPMVP-------VTKQSSTVESMDASNSL---EQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAA

Query:  INVEGK---HCCIVGELSKRAILTPDVDSML
        + +         ++G +  + + +PD +S+L
Subjt:  INVEGK---HCCIVGELSKRAILTPDVDSML

P25441 DNA-directed RNA polymerase III subunit RPC42.6e-0524.6Show/hide
Query:  DNSETNIFFLQLPPMVPVTKQSSTVESMD-----ASNSLEQRKGSQPR--QKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAA
        +N        QLP  +P  ++ +  E  +     AS+  +++K  + +  +   S  EL +G +G + V++SG + +K+GN+V D+  G +  F QDV A
Subjt:  DNSETNIFFLQLPPMVPVTKQSSTVESMD-----ASNSLEQRKGSQPR--QKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAA

Query:  INV--EGKHCCIVGELSKRAILTPDV
        +++  +     ++G +  + ++TP +
Subjt:  INV--EGKHCCIVGELSKRAILTPDV

Q5E9Z7 DNA-directed RNA polymerase III subunit RPC46.5e-0929.01Show/hide
Query:  ETNIFFLQLPPMVP-------VTKQSSTVESMDASN-SLEQRKGSQPR--QKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAA
        E  + FLQLP  +P       +    + V+S D     ++Q K  + R  + TC+L +L  G +GKLL+ +SG V+L LG +  DV+ G  C F Q++ +
Subjt:  ETNIFFLQLPPMVP-------VTKQSSTVESMDASN-SLEQRKGSQPR--QKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAA

Query:  INVEGKH---CCIVGELSKRAILTPDVDSML
        + +         ++G +  + + +P+ +S+L
Subjt:  INVEGKH---CCIVGELSKRAILTPDVDSML

Q91WD1 DNA-directed RNA polymerase III subunit RPC41.5e-0827.86Show/hide
Query:  DLGLLEDNSETNIFFLQLPPMVP-------VTKQSSTVESMDASN-SLEQRKGSQPR--QKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMD
        +L L++D     + FLQLP  +P       +    + V+  D     ++Q K  + R  +  C+L +L  G +GKLL+ +SG V+L LG +  DV+ G  
Subjt:  DLGLLEDNSETNIFFLQLPPMVP-------VTKQSSTVESMDASN-SLEQRKGSQPR--QKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMD

Query:  CGFAQDVAAINVEGK---HCCIVGELSKRAILTPDVDSML
        C F Q++ ++ +         ++G +  + + +PD +S+L
Subjt:  CGFAQDVAAINVEGK---HCCIVGELSKRAILTPDVDSML

Arabidopsis top hitse value%identityAlignment
AT4G25180.1 RNA polymerase III RPC41.2e-3431.99Show/hide
Query:  AQRKMKFAPKAPPRRIP-KPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRN-------------
        ++R+ +  P  P RR+P  P    E  ED +  +A    ++F+   +  + K   KA+  +VAF    +   +RS+G PK  ++P +             
Subjt:  AQRKMKFAPKAPPRRIP-KPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRN-------------

Query:  --------EDG----TLPSSTSKEYVEPWDY-YSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEA
                EDG       + T  +YVEPWDY  SYYP  LPLR+P SG+                                    I+ L++EEFGE ++ 
Subjt:  --------EDG----TLPSSTSKEYVEPWDY-YSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEA

Query:  RTYDENTTTPAMDLGLLE-DNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKG-SQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVS
        R YDENT   A +LGL    +S+  +F  ++P  +PV KQ  T  +    +  E   G S P         LP G MGK+LVY+SGAVKLK+G+ ++DVS
Subjt:  RTYDENTTTPAMDLGLLE-DNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKG-SQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVS

Query:  TGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL
         G       DV AI+++G++C  +G  +K   +TPDV+S+L    D+
Subjt:  TGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL

AT5G09380.1 RNA polymerase III RPC45.4e-5943.64Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISED-ADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNED
        MEQ PP       RKMKFAPKAPP+R+PKPEVK E+ ED +++AQA +LL+R NE +LR K K  KK   +QVA+  G  +ST  +    K  NR     
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISED-ADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNED

Query:  GTLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLG
        G+  S+   EY EPWDYYSYYPITLP+RRPY+G+P +                                    L+ EEF    +A  + E++   A +LG
Subjt:  GTLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLG

Query:  LLEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVE
        L+ED+ E  +FF++L P VP+   S+  E+++   +++        +KT  L  LP G MGKLLVY+SGAVK+KLG ++YDVS G+   FAQDV  +N E
Subjt:  LLEDNSETNIFFLQLPPMVPVTKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVE

Query:  GKHCCIVGELSKRAILTPDVDSMLKNIEDL
         K+CC+VG++ K A+LTPD+DS+LK+IE++
Subjt:  GKHCCIVGELSKRAILTPDVDSMLKNIEDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAAGATCCGCCCAAGAACAATACAGCTGCTCAAAGGAAGATGAAATTTGCTCCAAAAGCACCTCCTCGTCGTATACCAAAACCTGAAGTCAAAGCAGAAATATC
AGAGGACGCTGATGCTGCTCAAGCCAGGGATTTACTAAAACGCTTTAATGAAAGTACTCTGAGGACAAAGCAAAAAATTGGGAAAAAAGCGGCACCTACACAAGTTGCAT
TTGGTTCTGGAGGTACATCAAGCACCCTAAGATCATATGGTTTTCCAAAAGCTGGAAATAGACCAAGAAATGAAGATGGAACTCTTCCGTCTAGTACAAGCAAGGAGTAT
GTAGAACCATGGGATTATTACAGTTATTATCCTATAACTCTTCCTTTGCGGAGACCATATTCAGGAAATCCAGGTATCTTTGTAAGTTCATCTTATTTAAAGGAAAATAC
TGCAATGGAAACTGGATTATTTGGAAAGGCAGTTTATCTTCTACTTGTGTGTTTTATGCATTACTTCATAGATTCTCTTAACGAGGAGGAATTTGGAGAGGATTCAGAAG
CCAGAACCTATGATGAAAATACAACAACTCCAGCAATGGATCTTGGTCTACTGGAGGATAATTCAGAAACAAACATCTTTTTTCTACAATTACCACCTATGGTGCCTGTG
ACAAAGCAATCTTCTACTGTAGAAAGCATGGATGCATCCAACAGCTTAGAACAACGTAAAGGTTCACAACCTCGACAGAAAACCTGCTCTCTGAATGAGTTACCTTCTGG
CTCCATGGGTAAATTGCTGGTGTATAGGAGTGGTGCTGTCAAGTTAAAACTTGGCAATATTGTTTATGATGTTTCTACTGGAATGGATTGTGGCTTTGCACAAGACGTTG
CAGCTATCAATGTGGAAGGGAAGCATTGCTGCATTGTTGGGGAGCTTAGCAAGCGTGCCATTTTAACACCAGATGTGGACTCAATGTTAAAGAATATCGAGGATTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAAGATCCGCCCAAGAACAATACAGCTGCTCAAAGGAAGATGAAATTTGCTCCAAAAGCACCTCCTCGTCGTATACCAAAACCTGAAGTCAAAGCAGAAATATC
AGAGGACGCTGATGCTGCTCAAGCCAGGGATTTACTAAAACGCTTTAATGAAAGTACTCTGAGGACAAAGCAAAAAATTGGGAAAAAAGCGGCACCTACACAAGTTGCAT
TTGGTTCTGGAGGTACATCAAGCACCCTAAGATCATATGGTTTTCCAAAAGCTGGAAATAGACCAAGAAATGAAGATGGAACTCTTCCGTCTAGTACAAGCAAGGAGTAT
GTAGAACCATGGGATTATTACAGTTATTATCCTATAACTCTTCCTTTGCGGAGACCATATTCAGGAAATCCAGGTATCTTTGTAAGTTCATCTTATTTAAAGGAAAATAC
TGCAATGGAAACTGGATTATTTGGAAAGGCAGTTTATCTTCTACTTGTGTGTTTTATGCATTACTTCATAGATTCTCTTAACGAGGAGGAATTTGGAGAGGATTCAGAAG
CCAGAACCTATGATGAAAATACAACAACTCCAGCAATGGATCTTGGTCTACTGGAGGATAATTCAGAAACAAACATCTTTTTTCTACAATTACCACCTATGGTGCCTGTG
ACAAAGCAATCTTCTACTGTAGAAAGCATGGATGCATCCAACAGCTTAGAACAACGTAAAGGTTCACAACCTCGACAGAAAACCTGCTCTCTGAATGAGTTACCTTCTGG
CTCCATGGGTAAATTGCTGGTGTATAGGAGTGGTGCTGTCAAGTTAAAACTTGGCAATATTGTTTATGATGTTTCTACTGGAATGGATTGTGGCTTTGCACAAGACGTTG
CAGCTATCAATGTGGAAGGGAAGCATTGCTGCATTGTTGGGGAGCTTAGCAAGCGTGCCATTTTAACACCAGATGTGGACTCAATGTTAAAGAATATCGAGGATTTATGA
Protein sequenceShow/hide protein sequence
MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEISEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDGTLPSSTSKEY
VEPWDYYSYYPITLPLRRPYSGNPGIFVSSSYLKENTAMETGLFGKAVYLLLVCFMHYFIDSLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPPMVPV
TKQSSTVESMDASNSLEQRKGSQPRQKTCSLNELPSGSMGKLLVYRSGAVKLKLGNIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL