CuGenDBv2

Gene ID	Spg022289
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	vacuolar protein sorting-associated protein 27-like isoform X2
Genome location	scaffold2:9895547..9897101
RNA-Seq Expression	Spg022289
Synteny	Spg022289
Gene Ontology terms	GO:0006623 - protein targeting to vacuole (biological process) GO:0043328 - protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway (biological process) GO:0033565 - ESCRT-0 complex (cellular component) GO:0032266 - phosphatidylinositol-3-phosphate binding (molecular function) GO:0043130 - ubiquitin binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022960668.1 vacuolar protein sorting-associated protein 27-like isoform X1 [Cucurbita moschata]

9.7e-25

80.82

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Query:  RSREVGRPPSSTVADQVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQ
        +SREVG+PPS  V DQVAD VS+LNLDG+VN EPKPAV HQPA  ISDCKCGMPLCICET VQSME EAVPSQ
Subjt:  RSREVGRPPSSTVADQVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQ

XP_022960669.1 vacuolar protein sorting-associated protein 27-like isoform X2 [Cucurbita moschata]

9.7e-25

80.82

Show/hide

Query:  RSREVGRPPSSTVADQVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQ
        +SREVG+PPS  V DQVAD VS+LNLDG+VN EPKPAV HQPA  ISDCKCGMPLCICET VQSME EAVPSQ
Subjt:  RSREVGRPPSSTVADQVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQ

XP_022988285.1 myotubularin-related protein 3-like isoform X1 [Cucurbita maxima]

9.7e-25

80.82

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Query:  RSREVGRPPSSTVADQVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQ
        +SREVG+PPS  V DQVAD VS+LNLDG+VN EPKPAV HQPA  ISDCKCGMPLCICET VQSME EAVPSQ
Subjt:  RSREVGRPPSSTVADQVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQ

XP_022988286.1 myotubularin-related protein 3-like isoform X2 [Cucurbita maxima]

9.7e-25

80.82

Show/hide

Query:  RSREVGRPPSSTVADQVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQ
        +SREVG+PPS  V DQVAD VS+LNLDG+VN EPKPAV HQPA  ISDCKCGMPLCICET VQSME EAVPSQ
Subjt:  RSREVGRPPSSTVADQVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQ

XP_023516961.1 vacuolar protein sorting-associated protein 27-like isoform X1 [Cucurbita pepo subsp. pepo]

9.7e-25

80.82

Show/hide

Query:  RSREVGRPPSSTVADQVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQ
        +SREVG+PPS  V DQVAD VS+LNLDG+VN EPKPAV HQPA  ISDCKCGMPLCICET VQSME EAVPSQ
Subjt:  RSREVGRPPSSTVADQVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQ

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D305 uncharacterized protein LOC111016522 isoform X1

1.7e-22

75.34

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Query:  RSREVGRPPSSTVADQVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQ
        +SR+VG+ PS  V DQVAD VSQLNLD +VN E KPAV HQP L ISDCKCGMPLCICETS+Q ME EAVPSQ
Subjt:  RSREVGRPPSSTVADQVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQ

A0A6J1H9N2 vacuolar protein sorting-associated protein 27-like isoform X1

4.7e-25

80.82

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Query:  RSREVGRPPSSTVADQVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQ
        +SREVG+PPS  V DQVAD VS+LNLDG+VN EPKPAV HQPA  ISDCKCGMPLCICET VQSME EAVPSQ
Subjt:  RSREVGRPPSSTVADQVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQ

A0A6J1HBQ0 vacuolar protein sorting-associated protein 27-like isoform X2

4.7e-25

80.82

Show/hide

Query:  RSREVGRPPSSTVADQVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQ
        +SREVG+PPS  V DQVAD VS+LNLDG+VN EPKPAV HQPA  ISDCKCGMPLCICET VQSME EAVPSQ
Subjt:  RSREVGRPPSSTVADQVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQ

A0A6J1JGT2 myotubularin-related protein 3-like isoform X2

4.7e-25

80.82

Show/hide

Query:  RSREVGRPPSSTVADQVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQ
        +SREVG+PPS  V DQVAD VS+LNLDG+VN EPKPAV HQPA  ISDCKCGMPLCICET VQSME EAVPSQ
Subjt:  RSREVGRPPSSTVADQVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQ

A0A6J1JJ55 myotubularin-related protein 3-like isoform X1

4.7e-25

80.82

Show/hide

Query:  RSREVGRPPSSTVADQVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQ
        +SREVG+PPS  V DQVAD VS+LNLDG+VN EPKPAV HQPA  ISDCKCGMPLCICET VQSME EAVPSQ
Subjt:  RSREVGRPPSSTVADQVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGATGCTCCACGATCTTGACATATCTTCCTCTCTTCTCCGAATCGAAGGAAATAGAGAAGGACTTGTTTTCGATTCTCTCCGACAACCTAAACCTCCCATCGGCAGAAG
ACGAAGGGATTTGGTCGCCGGAGCCAAAACCTCTGATGAAGCACCCAACAAAAGAAAGGAACCAACCCACCCGCCCCCTGGAAAGATCTCCAGACCCCAGACACCCAAAC
ACTCCCTCACAAACCACTCAGAACCCCATTGGAACCATAGTTATTTATTGAGTCTGCCATATTACAGATCTAGAGAAGTTGGTCGACCACCATCGTCAACTGTAGCTGAT
CAAGTTGCAGATGCAGTTTCCCAATTAAACCTTGATGGGAATGTAAATTTTGAGCCTAAACCAGCTGTGGTGCATCAACCTGCGTTGGACATTTCAGATTGCAAGTGTGG
AATGCCATTATGCATTTGTGAAACGTCAGTGCAGTCTATGGAAGCAGAAGCAGTTCCTTCTCAGGTTTTAATATTTAGTAATTTCTAG

mRNA sequence

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Protein sequence

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MMLHDLDISSSLLRIEGNREGLVFDSLRQPKPPIGRRRRDLVAGAKTSDEAPNKRKEPTHPPPGKISRPQTPKHSLTNHSEPHWNHSYLLSLPYYRSREVGRPPSSTVAD
QVADAVSQLNLDGNVNFEPKPAVVHQPALDISDCKCGMPLCICETSVQSMEAEAVPSQVLIFSNF

Spg022289 (gene) of Sponge gourd (cylindrica) v1 genome