; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022304 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022304
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationscaffold2:14135988..14138039
RNA-Seq ExpressionSpg022304
SyntenySpg022304
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]2.7e-2954.79Show/hide
Query:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN
        +  S  I D   L   +  KKLL+EG+S+P +RKGLGYKSPEP+RI ++GK KV D NHIT+EE D++  KE  +QR SVF RIRP VAR +VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN

Query:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR
        EAE E  Q   S  R SVFRRL+     EEST      TRPSAF+R
Subjt:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]9.8e-1641.35Show/hide
Query:  IEDENEGWTLVVRRKKQKQSYARKESRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDD
        IE+++EGW +V  RKK++    ++ESR +++ +R  K+QK K KKK+ + K V  E  +F  P + +TLA++ P+ FL D Q E  E V CH ++  E++
Subjt:  IEDENEGWTLVVRRKKQKQSYARKESRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDD

Query:  DVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAKS
         +P  S     V  DLS F+++DLLSLPQE K+
Subjt:  DVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAKS

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]2.7e-2954.79Show/hide
Query:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN
        +  S  I D   L   +  KKLL+EG+S+P +RKGLGYKSPEP+RI ++GK KV D NHIT+EE D++  KE  +QR SVF RIRP VAR +VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN

Query:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR
        EAE E  Q   S  R SVFRRL+     EEST      TRPSAF+R
Subjt:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR

XP_031737045.1 uncharacterized protein LOC116402134 [Cucumis sativus]5.9e-2954.11Show/hide
Query:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN
        +  S  I D   L   +  KKLL+EG+S+P +RKGLGYKSPEP+RI ++GK KV D NHIT+EE D++  KE  +QR SVF RIRP VAR +VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN

Query:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR
        EAE E  Q   +  R SVFRRL+     EEST      TRPSAF+R
Subjt:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR

XP_031737045.1 uncharacterized protein LOC116402134 [Cucumis sativus]1.2e-0541.33Show/hide
Query:  DFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAKS
        +F  P + +TLA++ P+ FL   Q E  E V CH ++  E++ +P  S     V  DLS F+++DLLSLPQE K+
Subjt:  DFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAKS

XP_031737045.1 uncharacterized protein LOC116402134 [Cucumis sativus]5.9e-2954.11Show/hide
Query:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN
        +  S  I D   L   +  KKLL+EG+S+P +RKGLGYKSPEP+RI ++GK KV D NHIT+EE D++  KE  +QR SVF RIRP VAR +VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN

Query:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR
        EAE E  Q   +  R SVFRRL+     EEST      TRPSAF+R
Subjt:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]9.8e-1641.35Show/hide
Query:  IEDENEGWTLVVRRKKQKQSYARKESRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDD
        IE+++EGW +V  RKK++    ++ESR +++ +R  K+QK K KKK+ + K V  E  +F  P + +TLA++ P+ FL D Q E  E V CH ++  E++
Subjt:  IEDENEGWTLVVRRKKQKQSYARKESRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDD

Query:  DVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAKS
         +P  S     V  DLS F+++DLLSLPQE K+
Subjt:  DVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAKS

XP_031739261.1 uncharacterized protein LOC116402916 [Cucumis sativus]7.0e-3054Show/hide
Query:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN
        +  S  I D   L   +  KKLL+EG+S+P +RKGLGYKSPEP+RI ++GK KV D NHIT+EE D++  KE  +QR SVF RIRP VAR +VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN

Query:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQRCDKK
        EAE E  Q   +  R SVFRRL+     EEST      TRPSAF+R D K
Subjt:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQRCDKK

TrEMBL top hitse value%identityAlignment
A0A5A7TJZ7 Retrotransposon gag protein2.3e-0240.45Show/hide
Query:  SREKYVSIEDENEGWTLVVRRKKQKQSYARKESRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQ
        SREK  SIE+++EGW +V RRKK+K +  +KESR +R+ +R  K++K K KKK+++ K   E      C     T  E  P R L++ +
Subjt:  SREKYVSIEDENEGWTLVVRRKKQKQSYARKESRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQ

A0A5A7TJZ7 Retrotransposon gag protein5.4e-2854.33Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNEAEEESTQPTNSSTRPSVF
        KKLL+EG+ +P +RKGLGYKSPEP+RI R+GK KV D+NHIT++E D  +EKE   QRTS F RI P VARA VF++LS+ EAE +  Q T++  R S F
Subjt:  KKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNEAEEESTQPTNSSTRPSVF

Query:  RRLSMPIGDEESTFSTPNVTRPSAFQR
        +RL++   +E+    T   T+PSAF+R
Subjt:  RRLSMPIGDEESTFSTPNVTRPSAFQR

A0A5A7UD46 Uncharacterized protein8.1e-0844.3Show/hide
Query:  EESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAKS
        EE +DF    + +TLA++FP RFL D Q E    V CH ++  E++ +P  S     V  DLS F++ DLLSLPQE K+
Subjt:  EESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAKS

A0A5A7UMY2 Reverse transcriptase domain-containing protein1.1e-2855.91Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNEAEEESTQPTNSSTRPSVF
        KKLL+EG+ +P +RKGLGYKSPEP+RI R+GK KV D NHITV+EVD  +EKE  +QRTS F RI P VARA VF+RLS+ EA+ +  Q T++  R S F
Subjt:  KKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNEAEEESTQPTNSSTRPSVF

Query:  RRLSMPIGDEESTFSTPNVTRPSAFQR
        +RL++   +E+    T   T+PSAF+R
Subjt:  RRLSMPIGDEESTFSTPNVTRPSAFQR

A0A5D3BSG5 Uncharacterized protein4.1e-2855.91Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNEAEEESTQPTNSSTRPSVF
        KKLL+EG+ +P +RKGLGYKSPEP+RI R+GK KV D+NHITV+EVD  +E E   QRTS F RI P VAR  VF+RLS+ EAE +  Q T++  R SVF
Subjt:  KKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNEAEEESTQPTNSSTRPSVF

Query:  RRLSMPIGDEESTFSTPNVTRPSAFQR
        +RL++   +E+    T   T+PSAF+R
Subjt:  RRLSMPIGDEESTFSTPNVTRPSAFQR

A0A5D3BSG5 Uncharacterized protein2.9e-2145.32Show/hide
Query:  SREKYVSIEDENEGWTLVVRRKKQKQSYARKESRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHI
        S+EK   IE+++EGWT+V RRKK+K +  +KE R +R+ ++  K+QK K KKK+R+ K + EE +DF    + +TLA++FP RFL D Q E    V CH 
Subjt:  SREKYVSIEDENEGWTLVVRRKKQKQSYARKESRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHI

Query:  VDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAK
        ++ +E++++P  S     V  DLS F++ DLLSLPQE K
Subjt:  VDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAK

A0A5D3BSG5 Uncharacterized protein4.1e-2856.69Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNEAEEESTQPTNSSTRPSVF
        KKLL+EG+++P +RKGLGYKSPEP+RI R+GK KV D NHITV+EVD  KEKE   QRTS F RI P VAR  VF+RLS+ E E +  Q T++  R S F
Subjt:  KKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNEAEEESTQPTNSSTRPSVF

Query:  RRLSMPIGDEESTFSTPNVTRPSAFQR
        +RL+M    E+        TRPSAF+R
Subjt:  RRLSMPIGDEESTFSTPNVTRPSAFQR

A0A5D3DXC7 Reverse transcriptase domain-containing protein1.1e-2851.37Show/hide
Query:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN
        D  S  I +   L   +  KKLL+EG+ +P +RKGLGYKSPEP+RI R+GK KV D+NHITV+EVD  +EKE  +QRTS F RI P VARA VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN

Query:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR
        EAE +  Q T++  + S F+RL++   +E+    T   T+PSAF+R
Subjt:  EAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGATCCCGAGAAAAATATGTTTCCATCGAAGATGAGAACGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAAGCAAAGTTATGCACGGAAAGAGTCCCG
CCTATTTCGAGACAATAAAAGAAAGGCTAAGTCTCAAAAGAAGAAAGGAAAAAAGAAGTCAAGGAGGTCAAAGCCTGTCATGGAGGAAAGTGAAGATTTCTTTTGTCCTC
CACAACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGAT
GATGTCCCTACTAGCTCCTCGGGAACGGTGGCAGTTCCAGGAGACCTATCCTCCTTCAGCATAAAGGACTTACTATCACTTCCTCAGGAAGCTAAAAGCAAGAAACTTCT
AAAGGAAGGTTATAGTCTGCCTACAACGAGAAAAGGATTGGGATATAAGTCGCCTGAGCCAGTTCGCATAATAAGAAGAGGGAAGGCGAAAGTGGCAGATACAAATCATA
TAACAGTAGAAGAGGTTGATGACTCAAAAGAAAAAGAAAGTGTCGACCAACGAACTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCCCGTGCTTTAGTCTTTCAGAGA
TTAAGCGTCAATGAAGCGGAAGAAGAAAGCACACAACCTACCAATAGCTCCACTCGACCTTCAGTTTTTCGAAGGTTAAGTATGCCCATTGGGGATGAAGAGAGTACATT
TTCAACTCCGAATGTCACTCGACCTTCAGCTTTTCAAAGATGCGATAAAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGATCCCGAGAAAAATATGTTTCCATCGAAGATGAGAACGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAAGCAAAGTTATGCACGGAAAGAGTCCCG
CCTATTTCGAGACAATAAAAGAAAGGCTAAGTCTCAAAAGAAGAAAGGAAAAAAGAAGTCAAGGAGGTCAAAGCCTGTCATGGAGGAAAGTGAAGATTTCTTTTGTCCTC
CACAACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGAT
GATGTCCCTACTAGCTCCTCGGGAACGGTGGCAGTTCCAGGAGACCTATCCTCCTTCAGCATAAAGGACTTACTATCACTTCCTCAGGAAGCTAAAAGCAAGAAACTTCT
AAAGGAAGGTTATAGTCTGCCTACAACGAGAAAAGGATTGGGATATAAGTCGCCTGAGCCAGTTCGCATAATAAGAAGAGGGAAGGCGAAAGTGGCAGATACAAATCATA
TAACAGTAGAAGAGGTTGATGACTCAAAAGAAAAAGAAAGTGTCGACCAACGAACTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCCCGTGCTTTAGTCTTTCAGAGA
TTAAGCGTCAATGAAGCGGAAGAAGAAAGCACACAACCTACCAATAGCTCCACTCGACCTTCAGTTTTTCGAAGGTTAAGTATGCCCATTGGGGATGAAGAGAGTACATT
TTCAACTCCGAATGTCACTCGACCTTCAGCTTTTCAAAGATGCGATAAAAAATGA
Protein sequenceShow/hide protein sequence
MKGSREKYVSIEDENEGWTLVVRRKKQKQSYARKESRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDD
DVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQR
LSVNEAEEESTQPTNSSTRPSVFRRLSMPIGDEESTFSTPNVTRPSAFQRCDKK