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Spg022343 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022343
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 2-like
Genome locationscaffold2:14159306..14162847
RNA-Seq ExpressionSpg022343
SyntenySpg022343
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035755.1 uncharacterized protein E6C27_scaffold403G00270 [Cucumis melo var. makuwa]3.0e-1138.57Show/hide
Query:  FGHYNSRKDV--TWFMSNI----GDEMTSDICVVAD-HCEVDSHAGNAMHLQDGNHGLTLQH--NFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYM
        F   +S  D+  +WF  N+    G+   +++ +V+D H  +++   +   + +  HGL   H     KKNH  +   D     +     AYTPLE+EYYM
Subjt:  FGHYNSRKDV--TWFMSNI----GDEMTSDICVVAD-HCEVDSHAGNAMHLQDGNHGLTLQH--NFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYM

Query:  RQLEDITPSIRTELEGVGKTMWARAFFARKRY-TISININ
        RQLE ++PS+R ELE VG+  WARAFF RKRY  I+ NI+
Subjt:  RQLEDITPSIRTELEGVGKTMWARAFFARKRY-TISININ

KAA0067552.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]1.7e-1138.69Show/hide
Query:  FGHYNSRKDV--TWFMSNIGDEMT--SDICVVADHCEVDSHAGNAMHLQDGNHGLTLQH--NFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYMRQL
        F   +S  D+  +WF  N+       +++ +V+D  +   +  NA++ +   HGL   H     KKNH  +   D+    +     AYTPLE+EYY+RQL
Subjt:  FGHYNSRKDV--TWFMSNIGDEMT--SDICVVADHCEVDSHAGNAMHLQDGNHGLTLQH--NFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYMRQL

Query:  EDITPSIRTELEGVGKTMWARAFFARKRY-TISININ
        E ++PS+R ELE VG+  WARAFF RKRY  I+ NI+
Subjt:  EDITPSIRTELEGVGKTMWARAFFARKRY-TISININ

TYK09853.1 uncharacterized protein E5676_scaffold39G00210 [Cucumis melo var. makuwa]2.3e-1139.57Show/hide
Query:  FGHYNSRKDV--TWFMSNI----GDEMTSDICVVADHCEVDSHAGNAMHLQDGNHGLTLQH--NFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYMR
        F   +S  D+  +WF  N+    G+   +++ +V+D  +   +  NA++ +   HGL   H     KKNH  +   D     +     AYTPLE+EYYMR
Subjt:  FGHYNSRKDV--TWFMSNI----GDEMTSDICVVADHCEVDSHAGNAMHLQDGNHGLTLQH--NFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYMR

Query:  QLEDITPSIRTELEGVGKTMWARAFFARKRY-TISININ
        QLE ++PS+R ELE VG+  WARAFF RKRY  I+ NI+
Subjt:  QLEDITPSIRTELEGVGKTMWARAFFARKRY-TISININ

TYK23191.1 uncharacterized protein E5676_scaffold142G002210 [Cucumis melo var. makuwa]2.3e-1142.62Show/hide
Query:  TWFMSNI----GDEMTSDICVVADHCEVDSHAGNAMHLQDGNHGLTLQH---NFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYMRQLEDITPSIRT
        +WF  N+    G+   +++ +V+D  +   +  NA + +   HGL   H   NF KKNH  +   D     +     AYTPLE+EYYMRQLE ++PS+R 
Subjt:  TWFMSNI----GDEMTSDICVVADHCEVDSHAGNAMHLQDGNHGLTLQH---NFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYMRQLEDITPSIRT

Query:  ELEGVGKTMWARAFFARKRYTI
        ELE VG+  WARAFF RKRY I
Subjt:  ELEGVGKTMWARAFFARKRYTI

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]2.3e-1139.57Show/hide
Query:  FGHYNSRKDV--TWFMSNI----GDEMTSDICVVADHCEVDSHAGNAMHLQDGNHGLTLQH--NFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYMR
        F   +S  D+  +WF  N+    G+   +++ +V+D  +   +  NA++ +   HGL   H     KKNH  +   D     +     AYTPLE+EYYMR
Subjt:  FGHYNSRKDV--TWFMSNI----GDEMTSDICVVADHCEVDSHAGNAMHLQDGNHGLTLQH--NFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYMR

Query:  QLEDITPSIRTELEGVGKTMWARAFFARKRY-TISININ
        QLE ++PS+R ELE VG+  WARAFF RKRY  I+ NI+
Subjt:  QLEDITPSIRTELEGVGKTMWARAFFARKRY-TISININ

TrEMBL top hitse value%identityAlignment
A0A5A7T2S1 Uncharacterized protein1.4e-1138.57Show/hide
Query:  FGHYNSRKDV--TWFMSNI----GDEMTSDICVVAD-HCEVDSHAGNAMHLQDGNHGLTLQH--NFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYM
        F   +S  D+  +WF  N+    G+   +++ +V+D H  +++   +   + +  HGL   H     KKNH  +   D     +     AYTPLE+EYYM
Subjt:  FGHYNSRKDV--TWFMSNI----GDEMTSDICVVAD-HCEVDSHAGNAMHLQDGNHGLTLQH--NFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYM

Query:  RQLEDITPSIRTELEGVGKTMWARAFFARKRY-TISININ
        RQLE ++PS+R ELE VG+  WARAFF RKRY  I+ NI+
Subjt:  RQLEDITPSIRTELEGVGKTMWARAFFARKRY-TISININ

A0A5A7VGR4 Protein FAR1-RELATED SEQUENCE 2-like8.4e-1238.69Show/hide
Query:  FGHYNSRKDV--TWFMSNIGDEMT--SDICVVADHCEVDSHAGNAMHLQDGNHGLTLQH--NFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYMRQL
        F   +S  D+  +WF  N+       +++ +V+D  +   +  NA++ +   HGL   H     KKNH  +   D+    +     AYTPLE+EYY+RQL
Subjt:  FGHYNSRKDV--TWFMSNIGDEMT--SDICVVADHCEVDSHAGNAMHLQDGNHGLTLQH--NFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYMRQL

Query:  EDITPSIRTELEGVGKTMWARAFFARKRY-TISININ
        E ++PS+R ELE VG+  WARAFF RKRY  I+ NI+
Subjt:  EDITPSIRTELEGVGKTMWARAFFARKRY-TISININ

A0A5D3CDB8 Uncharacterized protein1.1e-1139.57Show/hide
Query:  FGHYNSRKDV--TWFMSNI----GDEMTSDICVVADHCEVDSHAGNAMHLQDGNHGLTLQH--NFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYMR
        F   +S  D+  +WF  N+    G+   +++ +V+D  +   +  NA++ +   HGL   H     KKNH  +   D     +     AYTPLE+EYYMR
Subjt:  FGHYNSRKDV--TWFMSNI----GDEMTSDICVVADHCEVDSHAGNAMHLQDGNHGLTLQH--NFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYMR

Query:  QLEDITPSIRTELEGVGKTMWARAFFARKRY-TISININ
        QLE ++PS+R ELE VG+  WARAFF RKRY  I+ NI+
Subjt:  QLEDITPSIRTELEGVGKTMWARAFFARKRY-TISININ

A0A5D3DHP7 Uncharacterized protein1.1e-1142.62Show/hide
Query:  TWFMSNI----GDEMTSDICVVADHCEVDSHAGNAMHLQDGNHGLTLQH---NFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYMRQLEDITPSIRT
        +WF  N+    G+   +++ +V+D  +   +  NA + +   HGL   H   NF KKNH  +   D     +     AYTPLE+EYYMRQLE ++PS+R 
Subjt:  TWFMSNI----GDEMTSDICVVADHCEVDSHAGNAMHLQDGNHGLTLQH---NFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYMRQLEDITPSIRT

Query:  ELEGVGKTMWARAFFARKRYTI
        ELE VG+  WARAFF RKRY I
Subjt:  ELEGVGKTMWARAFFARKRYTI

A0A5D3E198 MuDRA-like transposase1.1e-1139.57Show/hide
Query:  FGHYNSRKDV--TWFMSNI----GDEMTSDICVVADHCEVDSHAGNAMHLQDGNHGLTLQH--NFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYMR
        F   +S  D+  +WF  N+    G+   +++ +V+D  +   +  NA++ +   HGL   H     KKNH  +   D     +     AYTPLE+EYYMR
Subjt:  FGHYNSRKDV--TWFMSNI----GDEMTSDICVVADHCEVDSHAGNAMHLQDGNHGLTLQH--NFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYMR

Query:  QLEDITPSIRTELEGVGKTMWARAFFARKRY-TISININ
        QLE ++PS+R ELE VG+  WARAFF RKRY  I+ NI+
Subjt:  QLEDITPSIRTELEGVGKTMWARAFFARKRY-TISININ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACACGTGAGTTTCCAGGTGCTGCATCTTCGGTTTACAGAGGATGCACATTGTATGCTCAATATACAACAGGTGAGATGAAAACAATCGGTACAATGGGTTTAAG
TCCGACAGTGTGCCAGTACCGGAGGGATGCACAATACAAGAGTTTAATGAATGCATCCGGAGCAAGGTATTTGGCCTTAGATTTACAAATTCTTCTTGATTTGATCATTG
TTCTTGGAGCAAAAAGGCTATACGTGAATTTCAAGTTGGAGCATTGTGCTGAGGAGTTTGGCCACTACAATTCACGTAAGGATGTTACTTGGTTCATGTCCAACATTGGC
GATGAGATGACTAGCGACATATGCGTTGTGGCTGACCACTGTGAGGTAGATTCACACGCTGGGAATGCAATGCATTTACAAGATGGAAATCACGGATTAACTTTGCAGCA
TAACTTCACCAAAAAAAATCACGCAATTATTGATTACGTCGACGTTGAAAGATCAGTATCTGCTATGGAAGACTCGGCGTACACACCCCTTGAGTATGAATATTACATGA
GGCAGCTAGAAGACATAACACCATCTATTAGGACAGAGTTAGAGGGGGTAGGGAAAACTATGTGGGCAAGAGCGTTTTTTGCAAGGAAGAGATATACAATATCAATCAAT
ATCAATTTGAAGTACATGACCGGACAAAGCAATTTGAGGTCAACATCTTTGCTCAGACATGCACTTGCAGACGGTGGGACTTGGATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACACGTGAGTTTCCAGGTGCTGCATCTTCGGTTTACAGAGGATGCACATTGTATGCTCAATATACAACAGGTGAGATGAAAACAATCGGTACAATGGGTTTAAG
TCCGACAGTGTGCCAGTACCGGAGGGATGCACAATACAAGAGTTTAATGAATGCATCCGGAGCAAGGTATTTGGCCTTAGATTTACAAATTCTTCTTGATTTGATCATTG
TTCTTGGAGCAAAAAGGCTATACGTGAATTTCAAGTTGGAGCATTGTGCTGAGGAGTTTGGCCACTACAATTCACGTAAGGATGTTACTTGGTTCATGTCCAACATTGGC
GATGAGATGACTAGCGACATATGCGTTGTGGCTGACCACTGTGAGGTAGATTCACACGCTGGGAATGCAATGCATTTACAAGATGGAAATCACGGATTAACTTTGCAGCA
TAACTTCACCAAAAAAAATCACGCAATTATTGATTACGTCGACGTTGAAAGATCAGTATCTGCTATGGAAGACTCGGCGTACACACCCCTTGAGTATGAATATTACATGA
GGCAGCTAGAAGACATAACACCATCTATTAGGACAGAGTTAGAGGGGGTAGGGAAAACTATGTGGGCAAGAGCGTTTTTTGCAAGGAAGAGATATACAATATCAATCAAT
ATCAATTTGAAGTACATGACCGGACAAAGCAATTTGAGGTCAACATCTTTGCTCAGACATGCACTTGCAGACGGTGGGACTTGGATTTAA
Protein sequenceShow/hide protein sequence
MATREFPGAASSVYRGCTLYAQYTTGEMKTIGTMGLSPTVCQYRRDAQYKSLMNASGARYLALDLQILLDLIIVLGAKRLYVNFKLEHCAEEFGHYNSRKDVTWFMSNIG
DEMTSDICVVADHCEVDSHAGNAMHLQDGNHGLTLQHNFTKKNHAIIDYVDVERSVSAMEDSAYTPLEYEYYMRQLEDITPSIRTELEGVGKTMWARAFFARKRYTISIN
INLKYMTGQSNLRSTSLLRHALADGGTWI