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Spg022349 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022349
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionmini zinc finger
Genome locationscaffold2:4936469..4939376
RNA-Seq ExpressionSpg022349
SyntenySpg022349
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006456 - ZF-HD homeobox protein, Cys/His-rich dimerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023191.1 Mini zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]6.0e-4292.55Show/hide
Query:  MKKRLVMVKKSDGSGGR-NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH
        MKKR+V+VKKSDG GGR NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEALSCAACGCHRNFHRREVD+EVVFEYSPPNS+H
Subjt:  MKKRLVMVKKSDGSGGR-NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH

XP_022135253.1 mini zinc finger protein 3-like [Momordica charantia]5.5e-4394.62Show/hide
Query:  MKKRLVMVKKSDGSGGRNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH
        MKKRLV+VKKSDGSGGRNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEAL CAAC CHRNFHRREVDSEVVFEYSPPNS++
Subjt:  MKKRLVMVKKSDGSGGRNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH

XP_022921765.1 mini zinc finger protein 3-like [Cucurbita moschata]1.6e-4293.62Show/hide
Query:  MKKRLVMVKKSDGSGGR-NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH
        MKKR+V+VKKSDGSGGR NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEALSCAACGCHRNFHRREVD+EVVFEYSPPNS+H
Subjt:  MKKRLVMVKKSDGSGGR-NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH

XP_022987207.1 mini zinc finger protein 3-like [Cucurbita maxima]3.5e-4292.55Show/hide
Query:  MKKRLVMVKKSDGSGGR-NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH
        MKKR+V+VKKSDGSGGR NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEALSCAACGCHRNFHRR+VD+EVVFEYSPPNS+H
Subjt:  MKKRLVMVKKSDGSGGR-NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH

XP_023516615.1 mini zinc finger protein 3-like [Cucurbita pepo subsp. pepo]1.3e-4192.55Show/hide
Query:  MKKRLVMVKKSDGSGGR-NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH
        MKKR+V+VKKSDGSGGR NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEALSCAACGCHRNFHRREVD+EVVFEYSP NS+H
Subjt:  MKKRLVMVKKSDGSGGR-NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH

TrEMBL top hitse value%identityAlignment
A0A0A0LSA6 ZF-HD dimerization-type domain-containing protein4.0e-3987.37Show/hide
Query:  MKKRLVMVKKSDGSGGRNR---SGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSN
        MKKRLV+V+KSDGS GR     S SGS VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEAL+CAACGCHRNFHRREVD+EVVFEYSPPNSN
Subjt:  MKKRLVMVKKSDGSGGRNR---SGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSN

A0A5A7UWS7 Mini zinc finger protein 3-like5.2e-3986.46Show/hide
Query:  MKKRLVMVKKSDGSGGRNR----SGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSN
        MKKRLV+VKKSDGS GR      + SGS VRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEAL+CAACGCHRNFHRREVD+EVVFEYSPPNSN
Subjt:  MKKRLVMVKKSDGSGGRNR----SGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSN

A0A6J1C4B2 mini zinc finger protein 3-like2.6e-4394.62Show/hide
Query:  MKKRLVMVKKSDGSGGRNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH
        MKKRLV+VKKSDGSGGRNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEAL CAAC CHRNFHRREVDSEVVFEYSPPNS++
Subjt:  MKKRLVMVKKSDGSGGRNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH

A0A6J1E6Q9 mini zinc finger protein 3-like7.7e-4393.62Show/hide
Query:  MKKRLVMVKKSDGSGGR-NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH
        MKKR+V+VKKSDGSGGR NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEALSCAACGCHRNFHRREVD+EVVFEYSPPNS+H
Subjt:  MKKRLVMVKKSDGSGGR-NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH

A0A6J1J9R5 mini zinc finger protein 3-like1.7e-4292.55Show/hide
Query:  MKKRLVMVKKSDGSGGR-NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH
        MKKR+V+VKKSDGSGGR NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGE+GTEEALSCAACGCHRNFHRR+VD+EVVFEYSPPNS+H
Subjt:  MKKRLVMVKKSDGSGGR-NRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH

SwissProt top hitse value%identityAlignment
B8BIU8 Mini zinc finger protein 11.2e-1969.35Show/hide
Query:  RSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDS
        R  +  VVRY ECQ+NHAA +GG AVDGCREFMA G +GT  AL CAACGCHR+FHRREV++
Subjt:  RSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDS

Q2Q493 Mini zinc finger protein 36.7e-2866.67Show/hide
Query:  MKKRLVMVKKSDGSGGRNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH
        MKKR V++K+   S     + S S VRY ECQKNHAA +GG+AVDGCREFMA G D   +AL+CAACGCHRNFHRREVD+EVV EYSPPN+N+
Subjt:  MKKRLVMVKKSDGSGGRNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH

Q9CA51 Mini zinc finger protein 19.7e-2758.42Show/hide
Query:  MKKRLVMVKKSDGSGGRNRSGSG----------SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPN
        MKKR +++K+   +   + S +           S VRY ECQKNHAA +GG+AVDGCREFMA G +GT +AL CAACGCHRNFHR+EVD+EVV EYSPPN
Subjt:  MKKRLVMVKKSDGSGGRNRSGSG----------SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPN

Query:  S
        +
Subjt:  S

Q9LJW5 Mini zinc finger protein 26.5e-2355.67Show/hide
Query:  MKKRLVMVKKSDGSGGRNRSGSGS-----VVRYAECQKNHAAKLGGFAVDGCREFMA-RGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNS
        M+KR V+++++        S + S      VRY ECQKNHAA +GG+AVDGCREFMA RGE+GT  AL+CAACGCHR+FHRRE+++EVV + + P S
Subjt:  MKKRLVMVKKSDGSGGRNRSGSGS-----VVRYAECQKNHAAKLGGFAVDGCREFMA-RGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNS

Q9SB61 Zinc-finger homeodomain protein 22.3e-2066.2Show/hide
Query:  SDGSGGRNRS-GSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDS
        S G GG  RS G G+ +RY EC KNHA  +GG AVDGC EFM  GEDGT +AL CAACGCHRNFHR+E +S
Subjt:  SDGSGGRNRS-GSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDS

Arabidopsis top hitse value%identityAlignment
AT1G14440.1 homeobox protein 314.5e-1956.52Show/hide
Query:  VVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH
        +++Y EC KNHAA +GG A DGC EFM  GEDG+ EAL+C+AC CHRNFHR+EV+ E+      P   H
Subjt:  VVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH

AT1G18835.1 mini zinc finger4.8e-2966.67Show/hide
Query:  MKKRLVMVKKSDGSGGRNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH
        MKKR V++K+   S     + S S VRY ECQKNHAA +GG+AVDGCREFMA G D   +AL+CAACGCHRNFHRREVD+EVV EYSPPN+N+
Subjt:  MKKRLVMVKKSDGSGGRNRSGSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH

AT1G74660.1 mini zinc finger 16.9e-2858.42Show/hide
Query:  MKKRLVMVKKSDGSGGRNRSGSG----------SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPN
        MKKR +++K+   +   + S +           S VRY ECQKNHAA +GG+AVDGCREFMA G +GT +AL CAACGCHRNFHR+EVD+EVV EYSPPN
Subjt:  MKKRLVMVKKSDGSGGRNRSGSG----------SVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPN

Query:  S
        +
Subjt:  S

AT3G28917.1 mini zinc finger 24.6e-2455.67Show/hide
Query:  MKKRLVMVKKSDGSGGRNRSGSGS-----VVRYAECQKNHAAKLGGFAVDGCREFMA-RGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNS
        M+KR V+++++        S + S      VRY ECQKNHAA +GG+AVDGCREFMA RGE+GT  AL+CAACGCHR+FHRRE+++EVV + + P S
Subjt:  MKKRLVMVKKSDGSGGRNRSGSGS-----VVRYAECQKNHAAKLGGFAVDGCREFMA-RGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNS

AT4G24660.1 homeobox protein 221.7e-2166.2Show/hide
Query:  SDGSGGRNRS-GSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDS
        S G GG  RS G G+ +RY EC KNHA  +GG AVDGC EFM  GEDGT +AL CAACGCHRNFHR+E +S
Subjt:  SDGSGGRNRS-GSGSVVRYAECQKNHAAKLGGFAVDGCREFMARGEDGTEEALSCAACGCHRNFHRREVDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGAGCTGAGTGGTCGGCCGAGGCTGAGGCCGACCATGGCCCATGGGGGGTTGGGTCGAGCTTGGCCCAACCCCTATGCTTTGCCTCTCCTTTGGGATCCACCTCT
CGATTGTGTCTTAGGTGTTGCGTTGTCCTACTTAGTCCTTGAATTCCCCAAGATTGGTGGGTTTAGTGCTCCGTCTGATTCCAAAACCATGAAGAAAAGGCTGGTCATGG
TCAAGAAATCTGATGGCTCTGGCGGCCGAAACCGCTCCGGTTCAGGCTCGGTCGTCCGCTACGCCGAGTGCCAGAAGAATCACGCTGCGAAGCTCGGTGGCTTCGCGGTC
GACGGTTGCCGGGAGTTCATGGCCAGAGGAGAGGATGGGACTGAGGAGGCTCTCAGCTGTGCTGCTTGTGGCTGCCACAGAAATTTTCACAGAAGGGAGGTTGATTCTGA
AGTTGTTTTTGAGTATTCTCCTCCAAACTCCAACCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGAGCTGAGTGGTCGGCCGAGGCTGAGGCCGACCATGGCCCATGGGGGGTTGGGTCGAGCTTGGCCCAACCCCTATGCTTTGCCTCTCCTTTGGGATCCACCTCT
CGATTGTGTCTTAGGTGTTGCGTTGTCCTACTTAGTCCTTGAATTCCCCAAGATTGGTGGGTTTAGTGCTCCGTCTGATTCCAAAACCATGAAGAAAAGGCTGGTCATGG
TCAAGAAATCTGATGGCTCTGGCGGCCGAAACCGCTCCGGTTCAGGCTCGGTCGTCCGCTACGCCGAGTGCCAGAAGAATCACGCTGCGAAGCTCGGTGGCTTCGCGGTC
GACGGTTGCCGGGAGTTCATGGCCAGAGGAGAGGATGGGACTGAGGAGGCTCTCAGCTGTGCTGCTTGTGGCTGCCACAGAAATTTTCACAGAAGGGAGGTTGATTCTGA
AGTTGTTTTTGAGTATTCTCCTCCAAACTCCAACCATTGA
Protein sequenceShow/hide protein sequence
MSELSGRPRLRPTMAHGGLGRAWPNPYALPLLWDPPLDCVLGVALSYLVLEFPKIGGFSAPSDSKTMKKRLVMVKKSDGSGGRNRSGSGSVVRYAECQKNHAAKLGGFAV
DGCREFMARGEDGTEEALSCAACGCHRNFHRREVDSEVVFEYSPPNSNH