; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022358 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022358
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationscaffold2:14207940..14213777
RNA-Seq ExpressionSpg022358
SyntenySpg022358
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0004518 - nuclease activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsIPR004808 - AP endonuclease 1
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW25035.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]6.5e-5340.2Show/hide
Query:  PSPDHEDLPLRDGNIGVWQPG-----WTVLESVGIKEVPVDKTPKGLEGGWGNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYN
        P+P+    PL D  +    PG      +VLES+ I+   V +  KG E    +  F  K+LSWN RGLG + KRR+VR  +S ++PD+V+L ETKR  ++
Subjt:  PSPDHEDLPLRDGNIGVWQPG-----WTVLESVGIKEVPVDKTPKGLEGGWGNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYN

Query:  REFVRSIWGNRKVDWSGIESMGASGGVLIMWDSRFINCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNV
        R FV S+W  ++V+W  + + GASGG++I+WDS    C + VLG FS +++ N   +   W+T +YGP  P  R++FW EL DL GL    WC+ GDFNV
Subjt:  REFVRSIWGNRKVDWSGIESMGASGGVLIMWDSRFINCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNV

Query:  IRSPSEKASGGRVTKSMKSFNEWIEDCNLFDPPLANGRYTWANSRAR---NRIDRRPLSDRETSDLLTLLSLIGETTFSASRRD-LRLWSPDPSRV
        IR  SEK    R+T +M+ F+E+I +  L DPPL N  +TW+N +A     R+DR             L S   +T FS S ++ L  W+ D S +
Subjt:  IRSPSEKASGGRVTKSMKSFNEWIEDCNLFDPPLANGRYTWANSRAR---NRIDRRPLSDRETSDLLTLLSLIGETTFSASRRD-LRLWSPDPSRV

RVW25035.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]5.6e-2034.91Show/hide
Query:  LWSPDPSRVPKIKKVQFFIWQVIHGRVNTLDRLSRKIPY-LYGPFCCILCRMAEEDLDHILWQCDFAAAVWDEFFGLFGLQFARHRGLSEMTEEFHPHPP
        LWS   S+VP   KV+   W V HG+VNT D+L  + PY    P  CILC+   E +DH+   C     +W++ F L GL +   R   +M         
Subjt:  LWSPDPSRVPKIKKVQFFIWQVIHGRVNTLDRLSRKIPY-LYGPFCCILCRMAEEDLDHILWQCDFAAAVWDEFFGLFGLQFARHRGLSEMTEEFHPHPP

Query:  FRDQGKFLWQAGICAIIWGLWGERNNRIFRGSERDSVEVWSLAKYNVSLWASVTRLFCNYSIGLVILDW
           +GK LWQ     ++W +W ERNNRIF    R    +W L  +  +LWAS +  F    + ++ L+W
Subjt:  FRDQGKFLWQAGICAIIWGLWGERNNRIFRGSERDSVEVWSLAKYNVSLWASVTRLFCNYSIGLVILDW

RVW25035.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]6.5e-5344.55Show/hide
Query:  KTPKGLEGGW------GNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYNREFVRSIWGNRKVDWSGIESMGASGGVLIMWDSRF
        + P+G+E  W      G++ F MK++SWNVRGLG ++KRR++++ +  E+PDVV++ ETK+   +R FV S+W  R  DW  + + GASGG+LI+WDS+ 
Subjt:  KTPKGLEGGW------GNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYNREFVRSIWGNRKVDWSGIESMGASGGVLIMWDSRF

Query:  INCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNVIRSPSEKASGGRVTKSMKSFNEWIEDCNLFDPPLA
        ++  +VV+G FS S++ +  G    W++ +YGP  P  R++FW EL D+ GL   LWC+ GDFNVIR  SEK  G  +T SM+ F+ +I +C L DPPL 
Subjt:  INCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNVIRSPSEKASGGRVTKSMKSFNEWIEDCNLFDPPLA

Query:  NGRYTWAN---SRARNRIDR
        N  +TW+N   S    R+DR
Subjt:  NGRYTWAN---SRARNRIDR

RVW64408.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]3.4e-5440.48Show/hide
Query:  PSPDHEDLPLRDGNIGVWQPGWTVLESVGIKEVPVDKTPKGL---EGGWGNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYNRE
        P+P+H  LPL    +    PG  V +    +E    K  +GL    G  G  L  MK+LSWN RGLG + KRR+VR  +S ++PD+V+L ETKR  ++R 
Subjt:  PSPDHEDLPLRDGNIGVWQPGWTVLESVGIKEVPVDKTPKGL---EGGWGNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYNRE

Query:  FVRSIWGNRKVDWSGIESMGASGGVLIMWDSRFINCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNVIR
        FV S+W  ++V+W+ + + GASGG++I+WDS  + C + VLG FS +++ N   +   W+T +YGP  P  R++FW EL DL GL    WC+ GDFNVIR
Subjt:  FVRSIWGNRKVDWSGIESMGASGGVLIMWDSRFINCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNVIR

Query:  SPSEKASGGRVTKSMKSFNEWIEDCNLFDPPLANGRYTWANSRAR---NRIDRRPLSDRETSDLLTLLSLIGETTFSASRRD-LRLWSPDPSRV
          SEK    R+T +M+ F+E+I +  L DPPL N  +TW+N +A     R+DR             L S   +T FS S ++ L  W+ D S +
Subjt:  SPSEKASGGRVTKSMKSFNEWIEDCNLFDPPLANGRYTWANSRAR---NRIDRRPLSDRETSDLLTLLSLIGETTFSASRRD-LRLWSPDPSRV

RVW64408.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.1e-2029.69Show/hide
Query:  RRPLSDRETSDLLTLLSLIGETTFSASRRDLRLWSPDPSRVPKIK----------------------------KVQFFIWQVIHGRVNTLDRLSRKIPY-
        RR L+D E   L  L+S +    F  S  D R WS   S +  +K                            KV+   W V HG+VNT D+L  + PY 
Subjt:  RRPLSDRETSDLLTLLSLIGETTFSASRRDLRLWSPDPSRVPKIK----------------------------KVQFFIWQVIHGRVNTLDRLSRKIPY-

Query:  LYGPFCCILCRMAEEDLDHILWQCDFAAAVWDEFFGLFGLQFARHRGLSEMTEEFHPHPPFRDQGKFLWQAGICAIIWGLWGERNNRIFRGSERDSVEVW
           P  CILC+   E +DH+   C     +W++ F L GL +   R   +M            +GK LWQ     ++W +W ERN RIF    R    +W
Subjt:  LYGPFCCILCRMAEEDLDHILWQCDFAAAVWDEFFGLFGLQFARHRGLSEMTEEFHPHPPFRDQGKFLWQAGICAIIWGLWGERNNRIFRGSERDSVEVW

Query:  SLAKYNVSLWASVTRLFCNYSIGLVILDW
         L  +  +LWAS +  F    + ++ L+W
Subjt:  SLAKYNVSLWASVTRLFCNYSIGLVILDW

RVW64408.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]3.8e-5337.31Show/hide
Query:  DSSTIPTGVPQNGSSSGYPPQLLNRVSSDTILVQVRSPSLGLSPSIHFERGG--WLYPGGLIHPSPDHEDLPLRDGNIGVWQPGWTVLESVGIKEVPVD-
        +S + P+  P +  ++   P L N V     L Q  + + G+S +  +E+GG  +L  G +     +     L +       P  +++ S   KEV  D 
Subjt:  DSSTIPTGVPQNGSSSGYPPQLLNRVSSDTILVQVRSPSLGLSPSIHFERGG--WLYPGGLIHPSPDHEDLPLRDGNIGVWQPGWTVLESVGIKEVPVD-

Query:  -------KTPKGLEGGW------GNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYNREFVRSIWGNRKVDWSGIESMGASGGVL
               + P+G+E  W      G++ F MK++SWNVRGLG ++KRR+V++ +  E+PDVV++ ETK+   +R FV S+W  R  DW  + + GASGG+L
Subjt:  -------KTPKGLEGGW------GNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYNREFVRSIWGNRKVDWSGIESMGASGGVL

Query:  IMWDSRFINCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNVIRSPSEKASGGRVTKSMKSFNEWIEDCN
        I+WDS+ +   +VV+G FS S++ +  G    W++ +YGP  P  R++FW EL D+ GL   LWC+ GDFNVIR  SEK  G  +T SM+ F+ +I +C 
Subjt:  IMWDSRFINCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNVIRSPSEKASGGRVTKSMKSFNEWIEDCN

Query:  LFDPPLANGRYTWAN---SRARNRIDR
        L DPPL N  +TW+N   S    R+DR
Subjt:  LFDPPLANGRYTWAN---SRARNRIDR

RVW91468.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]6.5e-5344.55Show/hide
Query:  KTPKGLEGGW------GNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYNREFVRSIWGNRKVDWSGIESMGASGGVLIMWDSRF
        + P+G+E  W      G++ F MK++SWNVRGLG ++KRR++++ +  E+PDVV++ ETK+   +R FV S+W  R  DW  + + GASGG+LI+WDS+ 
Subjt:  KTPKGLEGGW------GNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYNREFVRSIWGNRKVDWSGIESMGASGGVLIMWDSRF

Query:  INCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNVIRSPSEKASGGRVTKSMKSFNEWIEDCNLFDPPLA
        ++  +VV+G FS S++ +  G    W++ +YGP  P  R++FW EL D+ GL   LWC+ GDFNVIR  SEK  G  +T SM+ F+ +I +C L DPPL 
Subjt:  INCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNVIRSPSEKASGGRVTKSMKSFNEWIEDCNLFDPPLA

Query:  NGRYTWAN---SRARNRIDR
        N  +TW+N   S    R+DR
Subjt:  NGRYTWAN---SRARNRIDR

TrEMBL top hitse value%identityAlignment
A0A438BYX6 Transposon TX1 uncharacterized 149 kDa protein3.1e-5344.55Show/hide
Query:  KTPKGLEGGW------GNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYNREFVRSIWGNRKVDWSGIESMGASGGVLIMWDSRF
        + P+G+E  W      G++ F MK++SWNVRGLG ++KRR++++ +  E+PDVV++ ETK+   +R FV S+W  R  DW  + + GASGG+LI+WDS+ 
Subjt:  KTPKGLEGGW------GNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYNREFVRSIWGNRKVDWSGIESMGASGGVLIMWDSRF

Query:  INCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNVIRSPSEKASGGRVTKSMKSFNEWIEDCNLFDPPLA
        ++  +VV+G FS S++ +  G    W++ +YGP  P  R++FW EL D+ GL   LWC+ GDFNVIR  SEK  G  +T SM+ F+ +I +C L DPPL 
Subjt:  INCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNVIRSPSEKASGGRVTKSMKSFNEWIEDCNLFDPPLA

Query:  NGRYTWAN---SRARNRIDR
        N  +TW+N   S    R+DR
Subjt:  NGRYTWAN---SRARNRIDR

A0A438CP96 LINE-1 retrotransposable element ORF2 protein3.1e-5340.2Show/hide
Query:  PSPDHEDLPLRDGNIGVWQPG-----WTVLESVGIKEVPVDKTPKGLEGGWGNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYN
        P+P+    PL D  +    PG      +VLES+ I+   V +  KG E    +  F  K+LSWN RGLG + KRR+VR  +S ++PD+V+L ETKR  ++
Subjt:  PSPDHEDLPLRDGNIGVWQPG-----WTVLESVGIKEVPVDKTPKGLEGGWGNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYN

Query:  REFVRSIWGNRKVDWSGIESMGASGGVLIMWDSRFINCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNV
        R FV S+W  ++V+W  + + GASGG++I+WDS    C + VLG FS +++ N   +   W+T +YGP  P  R++FW EL DL GL    WC+ GDFNV
Subjt:  REFVRSIWGNRKVDWSGIESMGASGGVLIMWDSRFINCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNV

Query:  IRSPSEKASGGRVTKSMKSFNEWIEDCNLFDPPLANGRYTWANSRAR---NRIDRRPLSDRETSDLLTLLSLIGETTFSASRRD-LRLWSPDPSRV
        IR  SEK    R+T +M+ F+E+I +  L DPPL N  +TW+N +A     R+DR             L S   +T FS S ++ L  W+ D S +
Subjt:  IRSPSEKASGGRVTKSMKSFNEWIEDCNLFDPPLANGRYTWANSRAR---NRIDRRPLSDRETSDLLTLLSLIGETTFSASRRD-LRLWSPDPSRV

A0A438CP96 LINE-1 retrotransposable element ORF2 protein2.7e-2034.91Show/hide
Query:  LWSPDPSRVPKIKKVQFFIWQVIHGRVNTLDRLSRKIPY-LYGPFCCILCRMAEEDLDHILWQCDFAAAVWDEFFGLFGLQFARHRGLSEMTEEFHPHPP
        LWS   S+VP   KV+   W V HG+VNT D+L  + PY    P  CILC+   E +DH+   C     +W++ F L GL +   R   +M         
Subjt:  LWSPDPSRVPKIKKVQFFIWQVIHGRVNTLDRLSRKIPY-LYGPFCCILCRMAEEDLDHILWQCDFAAAVWDEFFGLFGLQFARHRGLSEMTEEFHPHPP

Query:  FRDQGKFLWQAGICAIIWGLWGERNNRIFRGSERDSVEVWSLAKYNVSLWASVTRLFCNYSIGLVILDW
           +GK LWQ     ++W +W ERNNRIF    R    +W L  +  +LWAS +  F    + ++ L+W
Subjt:  FRDQGKFLWQAGICAIIWGLWGERNNRIFRGSERDSVEVWSLAKYNVSLWASVTRLFCNYSIGLVILDW

A0A438CP96 LINE-1 retrotransposable element ORF2 protein3.1e-5344.55Show/hide
Query:  KTPKGLEGGW------GNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYNREFVRSIWGNRKVDWSGIESMGASGGVLIMWDSRF
        + P+G+E  W      G++ F MK++SWNVRGLG ++KRR++++ +  E+PDVV++ ETK+   +R FV S+W  R  DW  + + GASGG+LI+WDS+ 
Subjt:  KTPKGLEGGW------GNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYNREFVRSIWGNRKVDWSGIESMGASGGVLIMWDSRF

Query:  INCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNVIRSPSEKASGGRVTKSMKSFNEWIEDCNLFDPPLA
        ++  +VV+G FS S++ +  G    W++ +YGP  P  R++FW EL D+ GL   LWC+ GDFNVIR  SEK  G  +T SM+ F+ +I +C L DPPL 
Subjt:  INCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNVIRSPSEKASGGRVTKSMKSFNEWIEDCNLFDPPLA

Query:  NGRYTWAN---SRARNRIDR
        N  +TW+N   S    R+DR
Subjt:  NGRYTWAN---SRARNRIDR

A0A438FWU5 LINE-1 retrotransposable element ORF2 protein1.7e-5440.48Show/hide
Query:  PSPDHEDLPLRDGNIGVWQPGWTVLESVGIKEVPVDKTPKGL---EGGWGNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYNRE
        P+P+H  LPL    +    PG  V +    +E    K  +GL    G  G  L  MK+LSWN RGLG + KRR+VR  +S ++PD+V+L ETKR  ++R 
Subjt:  PSPDHEDLPLRDGNIGVWQPGWTVLESVGIKEVPVDKTPKGL---EGGWGNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYNRE

Query:  FVRSIWGNRKVDWSGIESMGASGGVLIMWDSRFINCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNVIR
        FV S+W  ++V+W+ + + GASGG++I+WDS  + C + VLG FS +++ N   +   W+T +YGP  P  R++FW EL DL GL    WC+ GDFNVIR
Subjt:  FVRSIWGNRKVDWSGIESMGASGGVLIMWDSRFINCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNVIR

Query:  SPSEKASGGRVTKSMKSFNEWIEDCNLFDPPLANGRYTWANSRAR---NRIDRRPLSDRETSDLLTLLSLIGETTFSASRRD-LRLWSPDPSRV
          SEK    R+T +M+ F+E+I +  L DPPL N  +TW+N +A     R+DR             L S   +T FS S ++ L  W+ D S +
Subjt:  SPSEKASGGRVTKSMKSFNEWIEDCNLFDPPLANGRYTWANSRAR---NRIDRRPLSDRETSDLLTLLSLIGETTFSASRRD-LRLWSPDPSRV

A0A438FWU5 LINE-1 retrotransposable element ORF2 protein5.4e-2129.69Show/hide
Query:  RRPLSDRETSDLLTLLSLIGETTFSASRRDLRLWSPDPSRVPKIK----------------------------KVQFFIWQVIHGRVNTLDRLSRKIPY-
        RR L+D E   L  L+S +    F  S  D R WS   S +  +K                            KV+   W V HG+VNT D+L  + PY 
Subjt:  RRPLSDRETSDLLTLLSLIGETTFSASRRDLRLWSPDPSRVPKIK----------------------------KVQFFIWQVIHGRVNTLDRLSRKIPY-

Query:  LYGPFCCILCRMAEEDLDHILWQCDFAAAVWDEFFGLFGLQFARHRGLSEMTEEFHPHPPFRDQGKFLWQAGICAIIWGLWGERNNRIFRGSERDSVEVW
           P  CILC+   E +DH+   C     +W++ F L GL +   R   +M            +GK LWQ     ++W +W ERN RIF    R    +W
Subjt:  LYGPFCCILCRMAEEDLDHILWQCDFAAAVWDEFFGLFGLQFARHRGLSEMTEEFHPHPPFRDQGKFLWQAGICAIIWGLWGERNNRIFRGSERDSVEVW

Query:  SLAKYNVSLWASVTRLFCNYSIGLVILDW
         L  +  +LWAS +  F    + ++ L+W
Subjt:  SLAKYNVSLWASVTRLFCNYSIGLVILDW

A0A438FWU5 LINE-1 retrotransposable element ORF2 protein1.8e-5337.31Show/hide
Query:  DSSTIPTGVPQNGSSSGYPPQLLNRVSSDTILVQVRSPSLGLSPSIHFERGG--WLYPGGLIHPSPDHEDLPLRDGNIGVWQPGWTVLESVGIKEVPVD-
        +S + P+  P +  ++   P L N V     L Q  + + G+S +  +E+GG  +L  G +     +     L +       P  +++ S   KEV  D 
Subjt:  DSSTIPTGVPQNGSSSGYPPQLLNRVSSDTILVQVRSPSLGLSPSIHFERGG--WLYPGGLIHPSPDHEDLPLRDGNIGVWQPGWTVLESVGIKEVPVD-

Query:  -------KTPKGLEGGW------GNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYNREFVRSIWGNRKVDWSGIESMGASGGVL
               + P+G+E  W      G++ F MK++SWNVRGLG ++KRR+V++ +  E+PDVV++ ETK+   +R FV S+W  R  DW  + + GASGG+L
Subjt:  -------KTPKGLEGGW------GNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYNREFVRSIWGNRKVDWSGIESMGASGGVL

Query:  IMWDSRFINCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNVIRSPSEKASGGRVTKSMKSFNEWIEDCN
        I+WDS+ +   +VV+G FS S++ +  G    W++ +YGP  P  R++FW EL D+ GL   LWC+ GDFNVIR  SEK  G  +T SM+ F+ +I +C 
Subjt:  IMWDSRFINCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNVIRSPSEKASGGRVTKSMKSFNEWIEDCN

Query:  LFDPPLANGRYTWAN---SRARNRIDR
        L DPPL N  +TW+N   S    R+DR
Subjt:  LFDPPLANGRYTWAN---SRARNRIDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.9e-0624.09Show/hide
Query:  KIKKVQFFIWQVIHGRVNTLDRLSRKIPYLYGPFCCILCRMAEEDLDHILWQCDFAAAVWDEFFGLFGLQFARHRGLSEMTEEFHPHPPFRDQGKFLWQA
        KI K  F  W  +  R++T DR+     +++ P  C+ C   +E   H+ + C+FA  VW  F                 T   H  PP   +    W  
Subjt:  KIKKVQFFIWQVIHGRVNTLDRLSRKIPYLYGPFCCILCRMAEEDLDHILWQCDFAAAVWDEFFGLFGLQFARHRGLSEMTEEFHPHPPFRDQGKFLWQA

Query:  GIC--------------AIIWGLWGERNNRIFRGSER
          C              A ++ +W ERN R+   + R
Subjt:  GIC--------------AIIWGLWGERNNRIFRGSER

AT2G32080.1 purin-rich alpha 12.0e-0427.85Show/hide
Query:  AWVRDCLMAISKSKDPTGFWRRRRLDASVIFFQVLENTRGRFATVSVEPSRGRKNSLFIPEGKN-GKGWGALEAAMTEL
        +W  D       S++   F +  +LD+ V +F + EN RGRF  VS       ++++ +P G +  +GW A    + E+
Subjt:  AWVRDCLMAISKSKDPTGFWRRRRLDASVIFFQVLENTRGRFATVSVEPSRGRKNSLFIPEGKN-GKGWGALEAAMTEL

AT2G32080.2 purin-rich alpha 12.0e-0427.85Show/hide
Query:  AWVRDCLMAISKSKDPTGFWRRRRLDASVIFFQVLENTRGRFATVSVEPSRGRKNSLFIPEGKN-GKGWGALEAAMTEL
        +W  D       S++   F +  +LD+ V +F + EN RGRF  VS       ++++ +P G +  +GW A    + E+
Subjt:  AWVRDCLMAISKSKDPTGFWRRRRLDASVIFFQVLENTRGRFATVSVEPSRGRKNSLFIPEGKN-GKGWGALEAAMTEL

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein6.4e-0625.53Show/hide
Query:  IKKVQFFIWQVIHGRVNTLDRLSRKIPYLYGPFCCILCRMAEEDLDHILWQCDFAAAVWDEFFGLFGLQFARHRGLSEMTEEFHPHPPFRDQGKFLW---
        + K  F  W V   R++T DRL      L  P  C+LC   ++   H+ ++C F+  VW  FF                T   + +PP +      W   
Subjt:  IKKVQFFIWQVIHGRVNTLDRLSRKIPYLYGPFCCILCRMAEEDLDHILWQCDFAAAVWDEFFGLFGLQFARHRGLSEMTEEFHPHPPFRDQGKFLW---

Query:  ---QAGICAII--------WGLWGERNNRIFRGSERDSVEV
           +  IC II        + +W ERN R+  G  R +  +
Subjt:  ---QAGICAII--------WGLWGERNNRIFRGSERDSVEV

AT4G29090.1 Ribonuclease H-like superfamily protein4.9e-0624.11Show/hide
Query:  KVQFFIWQVIHGRVNTLDRLSRKIPYLYGPFCCILCRMAEEDLDHILWQCDFAAAVW--DEFFGLFGLQFAR--HRGLSEMTEEFHPHPPFRDQGKFL-W
        K+Q F+W+ +   +     L+ +  +L     CI C   +E ++H+L++C FA   W         G ++A   +  L  +    + +P +    + + W
Subjt:  KVQFFIWQVIHGRVNTLDRLSRKIPYLYGPFCCILCRMAEEDLDHILWQCDFAAAVW--DEFFGLFGLQFAR--HRGLSEMTEEFHPHPPFRDQGKFL-W

Query:  QAGICAIIWGLWGERNNRIFRGSERDSVEVWSLAKYNVSLW
              ++W LW  RN  +FRG E ++ EV   A+ ++  W
Subjt:  QAGICAIIWGLWGERNNRIFRGSERDSVEVWSLAKYNVSLW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAAGGAAAGGTTCGGGGGTGAGGCGTATGGAGCTGGAGCTGGGGACATTTGCCTGGGTTAGAGACTGTCTGATGGCGATATCGAAATCGAAGGACCCGACTGG
GTTTTGGAGAAGGAGAAGACTAGATGCTTCGGTTATTTTCTTTCAGGTCTTGGAAAACACGAGAGGCAGGTTCGCCACGGTCTCCGTCGAGCCTTCTCGAGGACGGAAGA
ACTCGCTTTTCATTCCAGAAGGTAAGAATGGGAAGGGATGGGGTGCGCTGGAGGCAGCCATGACGGAACTTCTACCCCCGGTGGTGCCAGCAATCCGGAAGAGGAAAATC
GAAGGAGGAACCGAGTTCAAATTTGAGGGCAGGGTTCTGAACTCAAAATCTTTTGCAGAAGCAGTGAAACAGGGGTCCAATCGATCAGCTGAAGACTCGACAAAATTCTC
GGACGACATCGACTTTGCTTTTGAGTGTTCAACATCATGGGTCTTTGCGGTAGTAACAAAGAGGCCGAAGAGCTCGTTAAGGCGGATCTCCGGCAAAGCGACAGCAAGTC
CGAGGCGTTCTGAACAAATCGTCCTTCATTTACCAGAAGCGGCGGAAATAGCAGGGCAACAGGTTCTTTGTCCAAGGAATCACGTGAGGCGTGGAGAAGTCAATGAAGGA
AATGGGGTCAAATCTGGGCCTCGGGATGCTGGGCCGCCTGATGATCTCAAGGGCAAGTCCATTTCTCTTGCAAACGACCAGATTAATTATGAGCTCAATCAATGTGACAG
TGGGCTAGCTCCAAGGCTTGATGGGCTGACCGAGGAAGAAATTGGGCCAGACACTAATCAGAATACGGGCCTTCTTTTAAATGGGATGGAGACTGAAGACCAAATGCTGG
ACTGGTTTGATGAGGCCAATCCCACGAACGAAAACCCCATCGAGGAAGATGCTGGTTCCGATCCTTCGGTGGTGAGTTATTCGGACGATGAATCATTTTTATCGACTCCT
GCTGCTAAAGAGTTGGAAATTTTGAATTTAAGCGGTATGTTTTCGAAGGAGAAGATGGAAGAGAAGGAGCCGTTGAAGAACGATCAGCAGATAGTTCCGTCCAGTGTGTT
AACAGGGGATTCTTCAACTATTCCGACAGGGGTGCCTCAAAATGGCTCGAGTTCGGGGTATCCGCCTCAGTTGCTGAATAGGGTGAGCTCGGACACGATTCTTGTCCAGG
TACGCTCTCCTTCTCTGGGTCTTTCTCCTTCTATTCATTTTGAGAGGGGAGGGTGGTTGTATCCGGGAGGGCTAATCCATCCCTCCCCAGACCACGAAGATTTACCGCTC
CGAGATGGTAATATTGGGGTTTGGCAACCGGGATGGACAGTGTTGGAGTCAGTTGGGATTAAGGAAGTTCCGGTTGACAAGACCCCTAAAGGCCTCGAAGGAGGTTGGGG
AAACGTCTTGTTCCAAATGAAGATGCTCTCTTGGAACGTGAGAGGGTTAGGGGGGCAGGATAAACGAAGGTTGGTTAGAGAGATCATCTCGCATGAATCCCCTGATGTCG
TAGTGTTGTTGGAGACTAAGCGGTATAAGTATAATCGTGAGTTTGTTCGAAGCATTTGGGGCAATAGAAAAGTGGATTGGTCGGGCATCGAATCAATGGGCGCCTCAGGA
GGGGTGCTTATCATGTGGGATAGTAGGTTTATTAATTGCTTGGATGTGGTGCTTGGCGAGTTTTCGGCTTCGATCAGGATTAATTGGAAAGGTAAGGACCTAGGCTGGGT
CACTGGTATTTACGGGCCACCTAGGCCCAAAGGCAGGCAAGAGTTCTGGAACGAGCTTGGAGATTTATCCGGGTTATGCGGGCATCTTTGGTGCATTTTGGGAGACTTTA
ACGTCATTCGTTCCCCTTCGGAGAAGGCTTCGGGAGGAAGAGTGACTAAGTCGATGAAGTCGTTTAACGAATGGATTGAGGACTGTAACCTTTTTGACCCCCCCTTAGCT
AATGGGAGATATACTTGGGCAAACAGCAGGGCTCGCAACAGAATTGATAGACGCCCGCTGTCTGATCGAGAAACCTCCGACCTTTTGACTCTCCTGTCTTTGATTGGGGA
GACCACTTTCAGCGCTTCTAGAAGGGATCTCCGCTTGTGGAGCCCCGACCCATCTCGAGTCCCAAAGATAAAGAAGGTGCAGTTTTTTATTTGGCAGGTTATCCACGGAA
GAGTTAACACCCTTGATCGGCTATCTAGAAAGATTCCTTACTTATATGGGCCCTTTTGTTGCATTCTCTGTCGGATGGCGGAGGAAGACCTTGATCATATTTTGTGGCAG
TGCGACTTTGCTGCGGCTGTTTGGGACGAGTTCTTCGGTCTTTTCGGCTTGCAGTTTGCCAGACATAGAGGTCTTAGTGAGATGACCGAGGAGTTCCATCCCCATCCTCC
TTTTCGGGATCAGGGAAAGTTCTTGTGGCAAGCAGGGATTTGTGCTATTATTTGGGGGCTTTGGGGCGAGAGAAACAACAGGATTTTTAGAGGGTCAGAGAGGGACTCAG
TTGAGGTTTGGTCCCTTGCTAAATATAATGTTTCCCTTTGGGCGTCGGTGACACGTTTGTTTTGTAATTATTCCATAGGTCTCGTCATTTTGGATTGGAGGCCCTTCTTA
TAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAAGGAAAGGTTCGGGGGTGAGGCGTATGGAGCTGGAGCTGGGGACATTTGCCTGGGTTAGAGACTGTCTGATGGCGATATCGAAATCGAAGGACCCGACTGG
GTTTTGGAGAAGGAGAAGACTAGATGCTTCGGTTATTTTCTTTCAGGTCTTGGAAAACACGAGAGGCAGGTTCGCCACGGTCTCCGTCGAGCCTTCTCGAGGACGGAAGA
ACTCGCTTTTCATTCCAGAAGGTAAGAATGGGAAGGGATGGGGTGCGCTGGAGGCAGCCATGACGGAACTTCTACCCCCGGTGGTGCCAGCAATCCGGAAGAGGAAAATC
GAAGGAGGAACCGAGTTCAAATTTGAGGGCAGGGTTCTGAACTCAAAATCTTTTGCAGAAGCAGTGAAACAGGGGTCCAATCGATCAGCTGAAGACTCGACAAAATTCTC
GGACGACATCGACTTTGCTTTTGAGTGTTCAACATCATGGGTCTTTGCGGTAGTAACAAAGAGGCCGAAGAGCTCGTTAAGGCGGATCTCCGGCAAAGCGACAGCAAGTC
CGAGGCGTTCTGAACAAATCGTCCTTCATTTACCAGAAGCGGCGGAAATAGCAGGGCAACAGGTTCTTTGTCCAAGGAATCACGTGAGGCGTGGAGAAGTCAATGAAGGA
AATGGGGTCAAATCTGGGCCTCGGGATGCTGGGCCGCCTGATGATCTCAAGGGCAAGTCCATTTCTCTTGCAAACGACCAGATTAATTATGAGCTCAATCAATGTGACAG
TGGGCTAGCTCCAAGGCTTGATGGGCTGACCGAGGAAGAAATTGGGCCAGACACTAATCAGAATACGGGCCTTCTTTTAAATGGGATGGAGACTGAAGACCAAATGCTGG
ACTGGTTTGATGAGGCCAATCCCACGAACGAAAACCCCATCGAGGAAGATGCTGGTTCCGATCCTTCGGTGGTGAGTTATTCGGACGATGAATCATTTTTATCGACTCCT
GCTGCTAAAGAGTTGGAAATTTTGAATTTAAGCGGTATGTTTTCGAAGGAGAAGATGGAAGAGAAGGAGCCGTTGAAGAACGATCAGCAGATAGTTCCGTCCAGTGTGTT
AACAGGGGATTCTTCAACTATTCCGACAGGGGTGCCTCAAAATGGCTCGAGTTCGGGGTATCCGCCTCAGTTGCTGAATAGGGTGAGCTCGGACACGATTCTTGTCCAGG
TACGCTCTCCTTCTCTGGGTCTTTCTCCTTCTATTCATTTTGAGAGGGGAGGGTGGTTGTATCCGGGAGGGCTAATCCATCCCTCCCCAGACCACGAAGATTTACCGCTC
CGAGATGGTAATATTGGGGTTTGGCAACCGGGATGGACAGTGTTGGAGTCAGTTGGGATTAAGGAAGTTCCGGTTGACAAGACCCCTAAAGGCCTCGAAGGAGGTTGGGG
AAACGTCTTGTTCCAAATGAAGATGCTCTCTTGGAACGTGAGAGGGTTAGGGGGGCAGGATAAACGAAGGTTGGTTAGAGAGATCATCTCGCATGAATCCCCTGATGTCG
TAGTGTTGTTGGAGACTAAGCGGTATAAGTATAATCGTGAGTTTGTTCGAAGCATTTGGGGCAATAGAAAAGTGGATTGGTCGGGCATCGAATCAATGGGCGCCTCAGGA
GGGGTGCTTATCATGTGGGATAGTAGGTTTATTAATTGCTTGGATGTGGTGCTTGGCGAGTTTTCGGCTTCGATCAGGATTAATTGGAAAGGTAAGGACCTAGGCTGGGT
CACTGGTATTTACGGGCCACCTAGGCCCAAAGGCAGGCAAGAGTTCTGGAACGAGCTTGGAGATTTATCCGGGTTATGCGGGCATCTTTGGTGCATTTTGGGAGACTTTA
ACGTCATTCGTTCCCCTTCGGAGAAGGCTTCGGGAGGAAGAGTGACTAAGTCGATGAAGTCGTTTAACGAATGGATTGAGGACTGTAACCTTTTTGACCCCCCCTTAGCT
AATGGGAGATATACTTGGGCAAACAGCAGGGCTCGCAACAGAATTGATAGACGCCCGCTGTCTGATCGAGAAACCTCCGACCTTTTGACTCTCCTGTCTTTGATTGGGGA
GACCACTTTCAGCGCTTCTAGAAGGGATCTCCGCTTGTGGAGCCCCGACCCATCTCGAGTCCCAAAGATAAAGAAGGTGCAGTTTTTTATTTGGCAGGTTATCCACGGAA
GAGTTAACACCCTTGATCGGCTATCTAGAAAGATTCCTTACTTATATGGGCCCTTTTGTTGCATTCTCTGTCGGATGGCGGAGGAAGACCTTGATCATATTTTGTGGCAG
TGCGACTTTGCTGCGGCTGTTTGGGACGAGTTCTTCGGTCTTTTCGGCTTGCAGTTTGCCAGACATAGAGGTCTTAGTGAGATGACCGAGGAGTTCCATCCCCATCCTCC
TTTTCGGGATCAGGGAAAGTTCTTGTGGCAAGCAGGGATTTGTGCTATTATTTGGGGGCTTTGGGGCGAGAGAAACAACAGGATTTTTAGAGGGTCAGAGAGGGACTCAG
TTGAGGTTTGGTCCCTTGCTAAATATAATGTTTCCCTTTGGGCGTCGGTGACACGTTTGTTTTGTAATTATTCCATAGGTCTCGTCATTTTGGATTGGAGGCCCTTCTTA
TAA
Protein sequenceShow/hide protein sequence
MEERKGSGVRRMELELGTFAWVRDCLMAISKSKDPTGFWRRRRLDASVIFFQVLENTRGRFATVSVEPSRGRKNSLFIPEGKNGKGWGALEAAMTELLPPVVPAIRKRKI
EGGTEFKFEGRVLNSKSFAEAVKQGSNRSAEDSTKFSDDIDFAFECSTSWVFAVVTKRPKSSLRRISGKATASPRRSEQIVLHLPEAAEIAGQQVLCPRNHVRRGEVNEG
NGVKSGPRDAGPPDDLKGKSISLANDQINYELNQCDSGLAPRLDGLTEEEIGPDTNQNTGLLLNGMETEDQMLDWFDEANPTNENPIEEDAGSDPSVVSYSDDESFLSTP
AAKELEILNLSGMFSKEKMEEKEPLKNDQQIVPSSVLTGDSSTIPTGVPQNGSSSGYPPQLLNRVSSDTILVQVRSPSLGLSPSIHFERGGWLYPGGLIHPSPDHEDLPL
RDGNIGVWQPGWTVLESVGIKEVPVDKTPKGLEGGWGNVLFQMKMLSWNVRGLGGQDKRRLVREIISHESPDVVVLLETKRYKYNREFVRSIWGNRKVDWSGIESMGASG
GVLIMWDSRFINCLDVVLGEFSASIRINWKGKDLGWVTGIYGPPRPKGRQEFWNELGDLSGLCGHLWCILGDFNVIRSPSEKASGGRVTKSMKSFNEWIEDCNLFDPPLA
NGRYTWANSRARNRIDRRPLSDRETSDLLTLLSLIGETTFSASRRDLRLWSPDPSRVPKIKKVQFFIWQVIHGRVNTLDRLSRKIPYLYGPFCCILCRMAEEDLDHILWQ
CDFAAAVWDEFFGLFGLQFARHRGLSEMTEEFHPHPPFRDQGKFLWQAGICAIIWGLWGERNNRIFRGSERDSVEVWSLAKYNVSLWASVTRLFCNYSIGLVILDWRPFL