; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022407 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022407
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold2:14270116..14271324
RNA-Seq ExpressionSpg022407
SyntenySpg022407
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]2.1e-3530.81Show/hide
Query:  KEDKIIRGKDSKGLFSVKSAYRTAVLVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRPEDVEHLF
        +ED+++   D KG +SVKS Y+ A+  +  N    SN  SS +LW+  W LD   KVKI +W+A+ + LPT EN+ KR      +C  C+ + E V H+ 
Subjt:  KEDKIIRGKDSKGLFSVKSAYRTAVLVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRPEDVEHLF

Query:  WNCKWVRKLWGSLIP--------NSEAMFSLCRGRWRFKEYWEALSRILDLQEARAACNLIWVIWNKRNQLKNSKSRADQNQSIA---DIICAVNRVQGD
          CK  RK+W  L P        +++  FS        +E W   S      EA       WVIW+ RN+      ++D     A    ++ A  RV   
Subjt:  WNCKWVRKLWGSLIP--------NSEAMFSLCRGRWRFKEYWEALSRILDLQEARAACNLIWVIWNKRNQLKNSKSRADQNQSIA---DIICAVNRVQGD

Query:  KKYQLSSPETQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNLVIE
              + +  +    WKPP   + K+NVDAA        G+G ++RD+ G ++  G K+   +  + + E+ AI  G+ Q  N+ S      S +L++E
Subjt:  KKYQLSSPETQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNLVIE

Query:  SDAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAA
        SD   VV+L+N    + +EI  ++ ++  ++     V+F F PR  N  AH+LA+ A
Subjt:  SDAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAA

XP_015382877.1 uncharacterized protein LOC107175700 [Citrus sinensis]2.9e-3229.46Show/hide
Query:  PKRNISKEDKIIRGKDSKGLFSVKSAYRTAVLVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRPE
        P     ++D +I   D  G++SVKS Y+  V    +N  S S+ + S+  W  IW  D   KVKI +W+A  + LPTV N+ +R +  +  C  C  R E
Subjt:  PKRNISKEDKIIRGKDSKGLFSVKSAYRTAVLVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRPE

Query:  DVEHLFWNCKWVRKLWGSLIPNSEAMFSLCRGRWRFKEYWEALSRILDL-------QEARAACNLIWVIWNKRNQLKNSKSRADQNQSIADIICAVNRVQ
        DV H    C   +++W  L    E +  L          W+ +  +L +        E      + W IW  RN+L       D   S+A  I  V    
Subjt:  DVEHLFWNCKWVRKLWGSLIPNSEAMFSLCRGRWRFKEYWEALSRILDL-------QEARAACNLIWVIWNKRNQLKNSKSRADQNQSIADIICAVNRVQ

Query:  GDK--KYQLSSPETQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHN
          K    Q SS  +++S   W  P    +K+NVDAA   ++   G+G +IR+S G +V A  +    + ++  +E+ A+L GI Q   + + +P      
Subjt:  GDK--KYQLSSPETQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHN

Query:  LVIESDAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAAAHFSDFIFF
        ++IESD+  VV L  ++  + +EI   I EI A     N+    + PR+ N +AHS+A+ A  F   +F+
Subjt:  LVIESDAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAAAHFSDFIFF

XP_023886153.1 uncharacterized protein LOC111998282 [Quercus suber]1.4e-3128.94Show/hide
Query:  EDKIIRGKDSKGLFSVKSAYRTAVLVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRPEDVEHLFW
        EDK+       G+++VKS YR  V     + +S  + S ++ +W  IW+L    KVK  L +A  DALP   N+ +R +   ++C  C  + ED  H  W
Subjt:  EDKIIRGKDSKGLFSVKSAYRTAVLVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRPEDVEHLFW

Query:  NCKWVRKLWGSLIPNSEAMFSLCRGRWRFKEYWEALSRILDL-QEARAACNLIWVIWNKRNQLKNSKSRADQNQ---SIADIICAVNRVQGDKKYQLSSP
        +C  +  +W      ++ M+  CR + RF  ++E    +L+  +       + W IW +RNQL+ S      +Q   S   ++   N VQ     Q+ SP
Subjt:  NCKWVRKLWGSLIPNSEAMFSLCRGRWRFKEYWEALSRILDL-QEARAACNLIWVIWNKRNQLKNSKSRADQNQ---SIADIICAVNRVQGDKKYQLSSP

Query:  ETQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNLVIESDAATVVK
            S   W+PP  +  K+N D A F  +   G+G ++RDS G ++ +  +KI   S    +E++A ++ I   + K  + P     + ++E D+  V+ 
Subjt:  ETQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNLVIESDAATVVK

Query:  LINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAA
         + +E E+ S    +I  I       N V F  + R  N LAHSLA+ A
Subjt:  LINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAA

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]1.9e-3129.44Show/hide
Query:  MPKRNISKEDKIIRGKDSKGLFSVKSAYRTAVLVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRP
        +PKR   KED++I   D KG +SVKS Y+ A+ +      S SN    + LWR IW+L    KVKI LW+A +D LPT EN+ K+ +    +C  C    
Subjt:  MPKRNISKEDKIIRGKDSKGLFSVKSAYRTAVLVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRP

Query:  EDVEHLFWNCKWVRKLW--GSLIPNSEAMFSLCRGRWRFKEYWEALSRILDLQEARAACNLIWVIWNKRNQLKNSKSRADQNQSIADIICAVNRVQGDKK
        E V H    C   RK+W   +L      ++  C   W   ++W      ++  E  A   L+W IW  RN+      + +  + +A+    V   +  ++
Subjt:  EDVEHLFWNCKWVRKLW--GSLIPNSEAMFSLCRGRWRFKEYWEALSRILDLQEARAACNLIWVIWNKRNQLKNSKSRADQNQSIADIICAVNRVQGDKK

Query:  YQL-----SSPETQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNL
         ++      + E Q     W PP     K+NVDAA    +   G+G ++RDS G+   A  K +     + + E+ A+  G+        ++        
Subjt:  YQL-----SSPETQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNL

Query:  VIESDAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAA
        + ESD+  V+ LIN+++ +L+EI  +I +I          +   SPR+ N+ AHSLA+ A
Subjt:  VIESDAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAA

XP_030924745.1 uncharacterized protein LOC115951731 [Quercus lobata]2.8e-3528.93Show/hide
Query:  MPKRNISKEDKIIRGKDSKGLFSVKSAYRTAVLVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRP
        MP       D+II      G+F+ KSAY+  V  +  N A  S+  + ++ WR +WQL    K+K   W+A NDALPT+ N+ +R I +NE+C  C+ +P
Subjt:  MPKRNISKEDKIIRGKDSKGLFSVKSAYRTAVLVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRP

Query:  EDVEHLFWNCKWVRKLWGSLI---PNSEAMFSLCRGRWRFKEYWEALSRILDLQEARAACNLIWVIWNKRNQLKNSKSRADQNQSIADIICAVNRVQGDK
        ED  H  W+C  +  +W  L    P + +  S       F+   +   ++ +   +     + W++WN+RN L+ + +    N  I+ +  +  +   D 
Subjt:  EDVEHLFWNCKWVRKLWGSLI---PNSEAMFSLCRGRWRFKEYWEALSRILDLQEARAACNLIWVIWNKRNQLKNSKSRADQNQSIADIICAVNRVQGDK

Query:  KYQLSSPETQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNLVIES
          Q+       S   W+PPD   +K N DAA F  SN  G+G +IRD  G  VGA    +     +  LE++A  + + QF  +          ++V E 
Subjt:  KYQLSSPETQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNLVIES

Query:  DAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAA
        D+  V++ I+QE  +      +I++I  QA+  +  +F+F+ R+ N +  +LA+ A
Subjt:  DAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAA

TrEMBL top hitse value%identityAlignment
A0A2N9EVK9 Reverse transcriptase domain-containing protein1.8e-3227.9Show/hide
Query:  MPKRNISKEDKIIRGKDSKGLFSVKSAYRTAVLVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRP
        +P  N    DK+    +  G +SV+S YR  V  +++N  S S  +  + +W SIW L    K ++  WKA  +ALPT  N+ KR I    +C +C    
Subjt:  MPKRNISKEDKIIRGKDSKGLFSVKSAYRTAVLVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRP

Query:  EDVEHLFWNCK-----WVRKLWGSLIPNSEAMFSLCRGRWRFKEYWEALSRILD---LQEARAACNLIWVIWNKRNQLKNSKSRADQNQSIADIICAVNR
        EDV H  W+C      W  ++W     N+ AM           ++ + LSR+L      E      + W +W +RN+++  +     NQ     IC +  
Subjt:  EDVEHLFWNCK-----WVRKLWGSLIPNSEAMFSLCRGRWRFKEYWEALSRILD---LQEARAACNLIWVIWNKRNQLKNSKSRADQNQSIADIICAVNR

Query:  VQGDKKYQLSSPETQLSHGV-WKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSH
           + ++   S + Q +  V WKPP  L +K+N D A F  +N  G+G ++RDS G ++ +  +K+     +  +E+ A+ + I   +    +  +    
Subjt:  VQGDKKYQLSSPETQLSHGV-WKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSH

Query:  NLVIESDAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAA
            E D+ T+V  +N    +L+   L+I +    AS+     F    R+ N LAH+LAR A
Subjt:  NLVIESDAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAA

A0A2N9FJ03 Reverse transcriptase domain-containing protein5.3e-3226.56Show/hide
Query:  MPKRNISKEDKIIRGKDSKGLFSVKSAYRTAVLVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRP
        +P  + +  DK      + G +SVKS Y+  + ++N+     S  +    +W+++W L    K +   W+A  DALPT  N++KR I  + +C  CR  P
Subjt:  MPKRNISKEDKIIRGKDSKGLFSVKSAYRTAVLVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRP

Query:  EDVEHLFWNCK-----WVRKLWGSLIPNSEAMFSLCRGRWRFKEYWEALSRILDL---QEARAACNLIWVIWNKRNQLK-NSKSRA-----DQNQSIADI
        EDV H  WNC      W +++W   I N   +           +Y +  S++L+    Q +     + WV+WN+RN+L+ N K  A      + ++  + 
Subjt:  EDVEHLFWNCK-----WVRKLWGSLIPNSEAMFSLCRGRWRFKEYWEALSRILDL---QEARAACNLIWVIWNKRNQLK-NSKSRA-----DQNQSIADI

Query:  ICAVNRVQGDKKYQLSSPETQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYP
          + N     K+   S+PE  +    W+PP  L +K N D A F  SN  G+G ++RD  G ++ +  +K+     ++ +E+ A  + + +F+ +     
Subjt:  ICAVNRVQGDKKYQLSSPETQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYP

Query:  DSLSHNLVIESDAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAAAH
                 E D+ T+V  +N  +  L+    +I +    A+      F    R  N LAH++AR A H
Subjt:  DSLSHNLVIESDAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAAAH

A0A2N9GAE6 Uncharacterized protein3.1e-3227.3Show/hide
Query:  MPKRNISKEDKIIRGKDSKGLFSVKSAYRTAVLVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRP
        +P  N    DKII   ++ G ++V+S YR  V  +++N    S  +  + +WRSIW L    K ++  WKA  +ALPT  N++KR I    +C +C  + 
Subjt:  MPKRNISKEDKIIRGKDSKGLFSVKSAYRTAVLVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRP

Query:  EDVEHLFWNCK-----WVRKLWGSLIPNSEAMFSLCRGRWRFKEYWEALSRILDL---QEARAACNLIWVIWNKRNQLKNSKSRADQNQSIADIICAVNR
        ED  H  W+CK     W  ++W   + NS  M           ++ + LS++L      E      + W +W +RN+++  +     NQ        +  
Subjt:  EDVEHLFWNCK-----WVRKLWGSLIPNSEAMFSLCRGRWRFKEYWEALSRILDL---QEARAACNLIWVIWNKRNQLKNSKSRADQNQSIADIICAVNR

Query:  VQGDKKYQLSSPETQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHN
           + +   S P+  L+   W PP    +K+N D A F  +N  G+G ++RDS G ++ +  +K+     +  +E+ A+ + I QF+ +           
Subjt:  VQGDKKYQLSSPETQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHN

Query:  LVIESDAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLAR
           E D+ T+V  +N    +L+   L+I +    AS+     F    R  N LAH+LAR
Subjt:  LVIESDAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLAR

A0A5B7A5C8 Uncharacterized protein9.7e-3429.62Show/hide
Query:  GLFSVKSAYRTAV-LVDNRNSASGSNFSSSK---KLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRPEDVEHLFWNCKWVRK
        G+FSV+SAY  AV ++  RNS   S  S+ +   KLW+++W L    K+KI LW+A+ D LPT   + +R I  +  C LC ++ E   HLF  C WVR 
Subjt:  GLFSVKSAYRTAV-LVDNRNSASGSNFSSSK---KLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRPEDVEHLFWNCKWVRK

Query:  LWGSLI---PNSEAMFSLCRGRWRFKEYWEALSRILDLQEARAACNLIWVIWNKRNQLKNSKSRADQNQSIADIICAVNRVQGDKKYQLSSPETQ---LS
        +W + +   P  +     C       + +E L   LD+ E    C ++W++W  RN + +S          +D +  +   Q D ++++     +   + 
Subjt:  LWGSLI---PNSEAMFSLCRGRWRFKEYWEALSRILDLQEARAACNLIWVIWNKRNQLKNSKSRADQNQSIADIICAVNRVQGDKKYQLSSPETQ---LS

Query:  HGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNLVIESDAATVVKLINQE
           W PP   ++K+N+D +W    N+GGVG +IRD  G ++G   K + +       ++MAIL GI           D     LV+E D   V+  I   
Subjt:  HGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNLVIESDAATVVKLINQE

Query:  AENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLA
        +++LS++  ++D+I    +     E     R+ N +AH+LA
Subjt:  AENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLA

A0A5B7BI33 Uncharacterized protein (Fragment)5.9e-3127.64Show/hide
Query:  DKIIRGKDSKGLFSVKSAYRTAVLV----DNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRPEDVEH
        D++I      G +SVKS Y  A  +     N   A  S   S  K W+ +W L    K+K  +W+A  + LPT   +  R +  + LC LC N PE   H
Subjt:  DKIIRGKDSKGLFSVKSAYRTAVLV----DNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRPEDVEH

Query:  LFWNCKWVRKLWGSLIPNSEAMFSLCRGRWRFKEYWEALSRILDLQEARAACNLIWVIWNKRNQLKNSKSRADQNQSIADIICAVNRVQGDKKYQLSSP-
        LF +C WV+ +W S    ++  F        F++++E +   LD       C +IW++W  RN + + +   D  + + D    +N    + +++L  P 
Subjt:  LFWNCKWVRKLWGSLIPNSEAMFSLCRGRWRFKEYWEALSRILDLQEARAACNLIWVIWNKRNQLKNSKSRADQNQSIADIICAVNRVQGDKKYQLSSP-

Query:  --ETQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNLVIESDAATV
           ++    VW PP   L+K+NVD +W   S SGG+G +IRDS G ++    K +         E+ A+  G+     K     D     ++IESD  ++
Subjt:  --ETQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNLVIESDAATV

Query:  VKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAA
        V  +   + + S I  + D+I          +     R+ N  AH +A  A
Subjt:  VKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10000.1 Ribonuclease H-like superfamily protein1.6e-1225.87Show/hide
Query:  PKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRPEDVEHLFWNCKWVRKLWGSLIPNSEAMFSLCRGRWRFKEYWEALSRI--------LDLQEA
        PK+K+ LWKA   ALP    + +R I S   C  C   PE   H+ ++C +  ++W +L P       +           EAL+ +        + +  A
Subjt:  PKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRPEDVEHLFWNCKWVRKLWGSLIPNSEAMFSLCRGRWRFKEYWEALSRI--------LDLQEA

Query:  RAACNLIWVIWNKRNQL--KNSKSRADQ--NQSIADIICAVNRVQGDKKYQLSSPE----TQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDS
             + W IW  RNQL  +NS     +   +++ D +   +      K ++++P     T L+H      D L +   VDAAW   S+  G GW+ + +
Subjt:  RAACNLIWVIWNKRNQL--KNSKSRADQ--NQSIADIICAVNRVQGDKKYQLSSPE----TQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDS

Query:  AGS-----LVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNLVIESDAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPR
        + S        AGC++          E+ AI   +   +    S       +L++ SD+ ++V  +N    +L+EI  ++ EI +  +R   + F F PR
Subjt:  AGS-----LVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNLVIESDAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPR

Query:  NTNFLAHSLARAAAHFS
            L +S+A AAA  S
Subjt:  NTNFLAHSLARAAAHFS

AT3G09510.1 Ribonuclease H-like superfamily protein6.2e-2526.23Show/hide
Query:  KEDKIIRGKDSKGLFSVKSAYRTAVLVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRPEDVEHLF
        K DKII   ++ G ++V+S Y       + N  + +    S  L   IW L   PK+K  LW+A++ AL T E +  RG+  +  C  C    E + H  
Subjt:  KEDKIIRGKDSKGLFSVKSAYRTAVLVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRPEDVEHLF

Query:  WNCKWVRKLWGSLIPNSEAMFSLCRGRWRFKEYWEALSRILDLQEARAACN--------LIWVIWNKRNQLKNSKSRADQNQSI----ADIICAVNRVQG
        + C +    W   + +S    SL R +    ++ E +S IL+  +     +        LIW IW  RN +  +K R   ++++    A+    +N  Q 
Subjt:  WNCKWVRKLWGSLIPNSEAMFSLCRGRWRFKEYWEALSRILDLQEARAACN--------LIWVIWNKRNQLKNSKSRADQNQSI----ADIICAVNRVQG

Query:  DKKYQLSSPETQLSHG--VWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNL
         KK    SP  Q++     W+ P     K N DA +         GW+IR+  G+ +  G  K++  S     E+ A+L  + Q   +  +        +
Subjt:  DKKYQLSSPETQLSHG--VWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNL

Query:  VIESDAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAAAHFSDF
         +E D  T++ LIN  + + S ++  +++I   A++   ++F F  R  N LAH LA+    +S F
Subjt:  VIESDAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAAAHFSDF

AT3G25270.1 Ribonuclease H-like superfamily protein1.1e-1824.12Show/hide
Query:  IWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRPEDVEHLFWNCKWVRKLW-GSLIPNSEAMFSLCRGRWRFKEYWEALSRILDLQEA
        IW+L   PK+K  LWK ++ AL T +N+K+R I ++  C  C    E  +HLF++C + +++W  S IP+ E   +      + +    +       Q  
Subjt:  IWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRPEDVEHLFWNCKWVRKLW-GSLIPNSEAMFSLCRGRWRFKEYWEALSRILDLQEA

Query:  RAACNLIWVIWNKRNQL---------KNSKSRADQN----QSIADIICAVNRVQGDKKYQLSSPETQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGW
          A  ++W +W  RNQL         +N+  RA  +    +     + ++N+     ++Q    +  ++   W+ P     K N D A+   + +   GW
Subjt:  RAACNLIWVIWNKRNQL---------KNSKSRADQN----QSIADIICAVNRVQGDKKYQLSSPETQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGW

Query:  LIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNLVIESDAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPR
        L+RD  G  +G+G    S  S+    E  A++  +    ++           ++ E D+  V +L+N E  N    + + +  + Q  R     F + PR
Subjt:  LIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNLVIESDAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPR

Query:  NTNFLAHSLAR
          N  A  LA+
Subjt:  NTNFLAHSLAR

AT4G29090.1 Ribonuclease H-like superfamily protein1.6e-2523.58Show/hide
Query:  SKGLFSVKSAYRTAV-LVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRPEDVEHLFWNCKWVRKL
        S G ++VKS Y     +++ R+S    +  S   +++ IW+    PK++  LWK ++++LP    +  R +     C  C +  E V HL + C + R  
Subjt:  SKGLFSVKSAYRTAV-LVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRPEDVEHLFWNCKWVRKL

Query:  WG--------------SLIPNSEAMFSLCRGRWRFKEYWEALSRILDLQEARAACNLIWVIWNKRNQL--KNSKSRADQNQSIADIICAVNRVQGDKKYQ
        W               S+  N   +F+L  G       WE  S+++          L+W +W  RN+L  +  +  A +    A+      R++ + +  
Subjt:  WG--------------SLIPNSEAMFSLCRGRWRFKEYWEALSRILDLQEARAACNLIWVIWNKRNQL--KNSKSRADQNQSIADIICAVNRVQGDKKYQ

Query:  LSSPETQLSH-GVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNLVIESDA
         + P+   S  G W+PP     K N DA W   +   G+GW++R+  G +   G + + +   +   E  A+   +      + +Y       ++ ESD+
Subjt:  LSSPETQLSH-GVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNLVIESDA

Query:  ATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAAAHFSDFIFFPFDPSL
          +++++N + E    +   I ++    S+   V+FVF PR  N LA  +AR +  F +     +DP L
Subjt:  ATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAAAHFSDFIFFPFDPSL

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.3e-0823.5Show/hide
Query:  LIWVIWNKRNQL----KNSKSRADQNQSIADIICAVNRVQGDKKYQLSSPETQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGC
        L+W IW   N L      +K +     ++ D    ++    +++   +       +  W PP     K N DA+  + +   G+GW++R+S G+++  G 
Subjt:  LIWVIWNKRNQL----KNSKSRADQNQSIADIICAVNRVQGDKKYQLSSPETQLSHGVWKPPDGLLWKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGC

Query:  KKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNLVI-ESDAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAA
         K   +   +  E   ++  I      ++SY     H  VI E D  T+ ++IN ++ N   +   +D I +       +EF F  R  N  A  LA+ A
Subjt:  KKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNLVI-ESDAATVVKLINQEAENLSEISLMIDEIWAQASRANMVEFVFSPRNTNFLAHSLARAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAAGAGAAACATTTCTAAAGAAGACAAGATTATTCGGGGGAAGGATTCTAAAGGCTTATTTTCGGTTAAAAGTGCTTATCGCACTGCAGTCCTCGTGGACAATCG
AAATTCAGCTTCGGGATCGAATTTTTCTTCTTCCAAAAAGCTATGGAGGTCTATTTGGCAGTTGGATTGCTGGCCAAAAGTTAAAATTAATCTCTGGAAAGCGATGAATG
ATGCGTTGCCCACAGTAGAGAACATTAAAAAAAGAGGAATTGACTCTAACGAGCTGTGTTTCTTGTGCAGGAACAGACCCGAGGACGTGGAGCATTTGTTTTGGAATTGC
AAATGGGTTAGGAAGCTTTGGGGATCCCTTATTCCTAATTCTGAAGCAATGTTTTCTTTATGCAGGGGCCGGTGGAGATTTAAAGAATATTGGGAAGCTTTGTCCAGGAT
CCTGGATCTTCAGGAAGCGAGGGCAGCGTGTAATCTTATATGGGTGATTTGGAACAAAAGGAATCAATTAAAGAATTCCAAAAGCAGAGCAGATCAAAATCAATCCATTG
CAGACATTATATGTGCGGTTAATAGAGTTCAAGGGGATAAAAAGTACCAATTGAGTTCGCCGGAGACCCAGTTGAGTCACGGTGTCTGGAAGCCTCCCGATGGTCTTCTG
TGGAAGATGAATGTGGACGCCGCCTGGTTTGACGCTTCAAACTCTGGTGGAGTGGGTTGGCTTATTCGCGACTCAGCCGGTTCTTTGGTCGGAGCTGGCTGCAAAAAGAT
CTCGAGGAAATCAGAGATCAAAATTTTAGAATCCATGGCGATTTTAAAAGGCATAAACCAGTTTATCAACAAACGATCCTCCTACCCGGATTCTCTTAGTCACAATTTGG
TTATTGAATCGGACGCCGCCACAGTAGTGAAGCTGATTAATCAAGAAGCAGAGAACTTATCTGAAATCTCCCTTATGATCGACGAGATTTGGGCCCAGGCGTCTCGTGCC
AACATGGTTGAGTTCGTCTTCAGCCCGAGAAACACAAATTTTTTGGCGCACTCCCTTGCGCGCGCTGCTGCTCATTTCAGCGATTTCATTTTCTTTCCTTTTGATCCTTC
TCTGTGCTTGAGAATGGATGAGTCGGTTTCCGAAGGCTTGTGGCCTTCACGGTTTTTTTCGATTTTGGAGGGTTTGTCTTTTGTTTCGAACGTTTTATCTCCTTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCAAGAGAAACATTTCTAAAGAAGACAAGATTATTCGGGGGAAGGATTCTAAAGGCTTATTTTCGGTTAAAAGTGCTTATCGCACTGCAGTCCTCGTGGACAATCG
AAATTCAGCTTCGGGATCGAATTTTTCTTCTTCCAAAAAGCTATGGAGGTCTATTTGGCAGTTGGATTGCTGGCCAAAAGTTAAAATTAATCTCTGGAAAGCGATGAATG
ATGCGTTGCCCACAGTAGAGAACATTAAAAAAAGAGGAATTGACTCTAACGAGCTGTGTTTCTTGTGCAGGAACAGACCCGAGGACGTGGAGCATTTGTTTTGGAATTGC
AAATGGGTTAGGAAGCTTTGGGGATCCCTTATTCCTAATTCTGAAGCAATGTTTTCTTTATGCAGGGGCCGGTGGAGATTTAAAGAATATTGGGAAGCTTTGTCCAGGAT
CCTGGATCTTCAGGAAGCGAGGGCAGCGTGTAATCTTATATGGGTGATTTGGAACAAAAGGAATCAATTAAAGAATTCCAAAAGCAGAGCAGATCAAAATCAATCCATTG
CAGACATTATATGTGCGGTTAATAGAGTTCAAGGGGATAAAAAGTACCAATTGAGTTCGCCGGAGACCCAGTTGAGTCACGGTGTCTGGAAGCCTCCCGATGGTCTTCTG
TGGAAGATGAATGTGGACGCCGCCTGGTTTGACGCTTCAAACTCTGGTGGAGTGGGTTGGCTTATTCGCGACTCAGCCGGTTCTTTGGTCGGAGCTGGCTGCAAAAAGAT
CTCGAGGAAATCAGAGATCAAAATTTTAGAATCCATGGCGATTTTAAAAGGCATAAACCAGTTTATCAACAAACGATCCTCCTACCCGGATTCTCTTAGTCACAATTTGG
TTATTGAATCGGACGCCGCCACAGTAGTGAAGCTGATTAATCAAGAAGCAGAGAACTTATCTGAAATCTCCCTTATGATCGACGAGATTTGGGCCCAGGCGTCTCGTGCC
AACATGGTTGAGTTCGTCTTCAGCCCGAGAAACACAAATTTTTTGGCGCACTCCCTTGCGCGCGCTGCTGCTCATTTCAGCGATTTCATTTTCTTTCCTTTTGATCCTTC
TCTGTGCTTGAGAATGGATGAGTCGGTTTCCGAAGGCTTGTGGCCTTCACGGTTTTTTTCGATTTTGGAGGGTTTGTCTTTTGTTTCGAACGTTTTATCTCCTTCGTGA
Protein sequenceShow/hide protein sequence
MPKRNISKEDKIIRGKDSKGLFSVKSAYRTAVLVDNRNSASGSNFSSSKKLWRSIWQLDCWPKVKINLWKAMNDALPTVENIKKRGIDSNELCFLCRNRPEDVEHLFWNC
KWVRKLWGSLIPNSEAMFSLCRGRWRFKEYWEALSRILDLQEARAACNLIWVIWNKRNQLKNSKSRADQNQSIADIICAVNRVQGDKKYQLSSPETQLSHGVWKPPDGLL
WKMNVDAAWFDASNSGGVGWLIRDSAGSLVGAGCKKISRKSEIKILESMAILKGINQFINKRSSYPDSLSHNLVIESDAATVVKLINQEAENLSEISLMIDEIWAQASRA
NMVEFVFSPRNTNFLAHSLARAAAHFSDFIFFPFDPSLCLRMDESVSEGLWPSRFFSILEGLSFVSNVLSPS