; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022416 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022416
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationscaffold2:15282401..15285687
RNA-Seq ExpressionSpg022416
SyntenySpg022416
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN65484.1 hypothetical protein VITISV_029474 [Vitis vinifera]1.1e-3437.14Show/hide
Query:  KWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQL
        KWGP P +  NMWLQH +F    G WW      GW GH FM+KL+ +K  +K WNK  FG    + + +  +L N DS E+ G +    +  R+L K +L
Subjt:  KWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQL

Query:  LSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVE-------VISNAESQTEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLA
          L  ++EI W Q+ ++KW+ EGD +++FFH +   +R    I E       +++N+ES   I+ E L++++ L++   G+ + +  L W PIS +    
Subjt:  LSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVE-------VISNAESQTEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLA

Query:  LELPFTEEEI
        LE PFTEEEI
Subjt:  LELPFTEEEI

CAN77340.1 hypothetical protein VITISV_038117 [Vitis vinifera]6.2e-3536.54Show/hide
Query:  KWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQL
        KWGP P +  NMWLQH  F    G WW  +   GW GH FM+KL+ LK  +K WNK+  G    + + +  ++ N DS E+ G +    + HR+L K +L
Subjt:  KWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQL

Query:  LSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVEVISN-----AESQTEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLALE
          L  ++EI W Q+ ++KW+ EGD ++KFFH  ++  RR    ++V+ N      +    I+ E L++++ L++   G+ + +  + W PIS++    LE
Subjt:  LSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVEVISN-----AESQTEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLALE

Query:  LPFTEEEI
         PFTEEEI
Subjt:  LPFTEEEI

RVW74143.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]8.0e-3536.54Show/hide
Query:  KWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQL
        KWGP P +  NMWL H +F  + G WW      GW GH FM+KL+ LK  +K WNK+ FG    + + +  ++ N DS E+ G +    +  R++ K +L
Subjt:  KWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQL

Query:  LSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVEVISN-----AESQTEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLALE
          L  ++EI W Q+ ++KW+ EGD ++KFFH  +A  RR    ++V+ N      ++   I+ E L++++ L++   G+ + +  L W PIS +    LE
Subjt:  LSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVEVISN-----AESQTEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLALE

Query:  LPFTEEEI
         PFTEEEI
Subjt:  LPFTEEEI

RVX13544.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.4e-3437.02Show/hide
Query:  KWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQL
        KWGP P +  NMWLQH +F    G WW      GW GH FM+KL+ +K  +K WNK  FG    + + +   L N DS E+ G +    +  R++ K +L
Subjt:  KWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQL

Query:  LSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVEVISNAESQ-----TEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLALE
          L  ++EI W Q+ ++KW+ EGD ++KFFH  +A  RR    ++ + N   Q       I+ E L++++ L++   G+ + +  L W PIS +  + LE
Subjt:  LSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVEVISNAESQ-----TEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLALE

Query:  LPFTEEEI
         PFTEEEI
Subjt:  LPFTEEEI

RVX14115.1 Protein SWEETIE [Vitis vinifera]4.7e-3537.62Show/hide
Query:  KWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQL
        KWGP P +  NMWLQH +F    G WW      GW GH FM+KL+ +K  +K WNK  FG    + + +  +L N DS E+ G +    +  R+L K +L
Subjt:  KWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQL

Query:  LSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVE-------VISNAESQTEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLA
          L  ++EI W Q+ ++KW+ EGD ++KFFH +   +R    I E       +++N+ES   I+ E L++++ L++   G+ + +  L W PIS +    
Subjt:  LSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVE-------VISNAESQTEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLA

Query:  LELPFTEEEI
        LE PFTEEEI
Subjt:  LELPFTEEEI

TrEMBL top hitse value%identityAlignment
A0A438GPL3 Transposon TX1 uncharacterized 149 kDa protein3.9e-3536.54Show/hide
Query:  KWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQL
        KWGP P +  NMWL H +F  + G WW      GW GH FM+KL+ LK  +K WNK+ FG    + + +  ++ N DS E+ G +    +  R++ K +L
Subjt:  KWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQL

Query:  LSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVEVISN-----AESQTEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLALE
          L  ++EI W Q+ ++KW+ EGD ++KFFH  +A  RR    ++V+ N      ++   I+ E L++++ L++   G+ + +  L W PIS +    LE
Subjt:  LSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVEVISN-----AESQTEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLALE

Query:  LPFTEEEI
         PFTEEEI
Subjt:  LPFTEEEI

A0A438JYU3 Protein SWEETIE2.3e-3537.62Show/hide
Query:  KWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQL
        KWGP P +  NMWLQH +F    G WW      GW GH FM+KL+ +K  +K WNK  FG    + + +  +L N DS E+ G +    +  R+L K +L
Subjt:  KWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQL

Query:  LSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVE-------VISNAESQTEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLA
          L  ++EI W Q+ ++KW+ EGD ++KFFH +   +R    I E       +++N+ES   I+ E L++++ L++   G+ + +  L W PIS +    
Subjt:  LSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVE-------VISNAESQTEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLA

Query:  LELPFTEEEI
        LE PFTEEEI
Subjt:  LELPFTEEEI

A5BCI7 Reverse transcriptase domain-containing protein5.1e-3537.14Show/hide
Query:  KWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQL
        KWGP P +  NMWLQH +F    G WW      GW GH FM+KL+ +K  +K WNK  FG    + + +  +L N DS E+ G +    +  R+L K +L
Subjt:  KWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQL

Query:  LSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVE-------VISNAESQTEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLA
          L  ++EI W Q+ ++KW+ EGD +++FFH +   +R    I E       +++N+ES   I+ E L++++ L++   G+ + +  L W PIS +    
Subjt:  LSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVE-------VISNAESQTEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLA

Query:  LELPFTEEEI
        LE PFTEEEI
Subjt:  LELPFTEEEI

A5BWI2 Reverse transcriptase domain-containing protein3.0e-3536.54Show/hide
Query:  KWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQL
        KWGP P +  NMWLQH  F    G WW  +   GW GH FM+KL+ LK  +K WNK+  G    + + +  ++ N DS E+ G +    + HR+L K +L
Subjt:  KWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQL

Query:  LSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVEVISN-----AESQTEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLALE
          L  ++EI W Q+ ++KW+ EGD ++KFFH  ++  RR    ++V+ N      +    I+ E L++++ L++   G+ + +  + W PIS++    LE
Subjt:  LSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVEVISN-----AESQTEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLALE

Query:  LPFTEEEI
         PFTEEEI
Subjt:  LPFTEEEI

A5CAA2 Reverse transcriptase domain-containing protein6.6e-3537.02Show/hide
Query:  KWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQL
        KWGP P +  NMWLQH +F    G WW      GW GH FM+KL+ +K  +K WNK  FG    + + +   L N DS E+ G +    +  R++ K +L
Subjt:  KWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQL

Query:  LSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVEVISNAESQ-----TEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLALE
          L  ++EI W Q+ ++KW+ EGD ++KFFH  +A  RR    ++ + N   Q       I+ E L++++ L++   G+ + +  L W PIS +  + LE
Subjt:  LSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVEVISNAESQ-----TEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLALE

Query:  LPFTEEEI
         PFTEEEI
Subjt:  LPFTEEEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein3.8e-0627.14Show/hide
Query:  QKLKGLKLIIKAWNKDIFGGNCSQVQHLTKE----LQNIDSWEESGTMYSA-HIQHRSLVKSQLLSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAA
        + LK  K   K  N+  FG     +QH TKE    L++I S   +    S   ++H  + + +    AA  E  + Q+ ++KWL +GD +T+FFH ++ A
Subjt:  QKLKGLKLIIKAWNKDIFGGNCSQVQHLTKE----LQNIDSWEESGTMYSA-HIQHRSLVKSQLLSLAAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAA

Query:  KRRISNIVEVIS-----NAESQTEIEGEFLKFYQHLFSKD
          +  N+++ +        E+ T+++   + +Y HL   D
Subjt:  KRRISNIVEVIS-----NAESQTEIEGEFLKFYQHLFSKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCACCTTCGGAGAGGAAAAATGGGGCCCGATCCCTTCCAAACTTGCTAATATGTGGCTTCAGCACAAGGCTTTCGATTCCATGGTTGGTGAATGGTGGATCAGAAA
CCCTCAACAAGGTTGGCCTGGCCATGGGTTTATGCAAAAGCTAAAGGGTTTAAAATTGATTATTAAGGCATGGAACAAAGATATCTTTGGTGGCAATTGCTCCCAAGTTC
AACATCTGACTAAGGAGCTTCAAAACATCGACTCTTGGGAAGAAAGTGGAACCATGTACAGTGCACACATTCAGCATAGATCCCTTGTTAAATCCCAGCTCCTTTCTTTA
GCAGCAAAACAAGAAATCCTTTGGGGACAGCAATGCAAGTTGAAATGGCTTTGTGAAGGAGATGAACATACTAAGTTCTTCCACTGTTTATTGGCTGCCAAAAGAAGAAT
AAGCAACATTGTTGAAGTTATATCCAATGCTGAGTCACAGACAGAGATTGAGGGAGAATTCCTTAAGTTCTATCAGCACCTCTTTTCAAAAGACAAGGGCAAACATTACC
TTCTTCCATCTCTTCAATGGGACCCTATTTCCCAAGATCAGAAGCTTGCCCTTGAACTCCCCTTCACGGAAGAAGAGATCCTCCATCAGTGGACTATCATTAAGAAGCCT
ATTGAAGGACTTGGGATTATCAACGTCCAACTAAAAAACCAAGCTGTCCTTGCTAAATGGGTTTGGCGTTTCCACAACAAAAGAGATGCCCTTTGGAGGAAGGTCATCAA
AACAAAATATGGCTCCACACTTATGGATCTCAAACTGGGAAAGAAATTGATTCATTCATCACACGGCCCTAGGAGAAGATTGCTTAAAGATGAGGAGATTATTGATTTTC
AGTTACCGTTGGCTAGTGTTTCTACAACTAAGATTGGGTTGTTAAGTGACTCAAGGAAGTGGGCTCTTGAATCTTCGGGCTTGTGTTCAATAAAATCGTTATCCAGAGGT
TACTTCAATGTAAACTTCCCTCATATTGCATTTCTCCATCAGTTTGTTCGTTTTGTTGGGCAGCAGAGGATTCTCTTCAACACATTTTCATATTCTCGACTGGCTTGGAA
AAGTTTGTTTTCAGTTTTCAACCTTCATTGGGTGTTTTTGGAGAATGTGTTGCAGTTGCTTATCGAGCCTCCATTGTCGGCCAAATCCATAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCACCTTCGGAGAGGAAAAATGGGGCCCGATCCCTTCCAAACTTGCTAATATGTGGCTTCAGCACAAGGCTTTCGATTCCATGGTTGGTGAATGGTGGATCAGAAA
CCCTCAACAAGGTTGGCCTGGCCATGGGTTTATGCAAAAGCTAAAGGGTTTAAAATTGATTATTAAGGCATGGAACAAAGATATCTTTGGTGGCAATTGCTCCCAAGTTC
AACATCTGACTAAGGAGCTTCAAAACATCGACTCTTGGGAAGAAAGTGGAACCATGTACAGTGCACACATTCAGCATAGATCCCTTGTTAAATCCCAGCTCCTTTCTTTA
GCAGCAAAACAAGAAATCCTTTGGGGACAGCAATGCAAGTTGAAATGGCTTTGTGAAGGAGATGAACATACTAAGTTCTTCCACTGTTTATTGGCTGCCAAAAGAAGAAT
AAGCAACATTGTTGAAGTTATATCCAATGCTGAGTCACAGACAGAGATTGAGGGAGAATTCCTTAAGTTCTATCAGCACCTCTTTTCAAAAGACAAGGGCAAACATTACC
TTCTTCCATCTCTTCAATGGGACCCTATTTCCCAAGATCAGAAGCTTGCCCTTGAACTCCCCTTCACGGAAGAAGAGATCCTCCATCAGTGGACTATCATTAAGAAGCCT
ATTGAAGGACTTGGGATTATCAACGTCCAACTAAAAAACCAAGCTGTCCTTGCTAAATGGGTTTGGCGTTTCCACAACAAAAGAGATGCCCTTTGGAGGAAGGTCATCAA
AACAAAATATGGCTCCACACTTATGGATCTCAAACTGGGAAAGAAATTGATTCATTCATCACACGGCCCTAGGAGAAGATTGCTTAAAGATGAGGAGATTATTGATTTTC
AGTTACCGTTGGCTAGTGTTTCTACAACTAAGATTGGGTTGTTAAGTGACTCAAGGAAGTGGGCTCTTGAATCTTCGGGCTTGTGTTCAATAAAATCGTTATCCAGAGGT
TACTTCAATGTAAACTTCCCTCATATTGCATTTCTCCATCAGTTTGTTCGTTTTGTTGGGCAGCAGAGGATTCTCTTCAACACATTTTCATATTCTCGACTGGCTTGGAA
AAGTTTGTTTTCAGTTTTCAACCTTCATTGGGTGTTTTTGGAGAATGTGTTGCAGTTGCTTATCGAGCCTCCATTGTCGGCCAAATCCATAATTTGA
Protein sequenceShow/hide protein sequence
MFTFGEEKWGPIPSKLANMWLQHKAFDSMVGEWWIRNPQQGWPGHGFMQKLKGLKLIIKAWNKDIFGGNCSQVQHLTKELQNIDSWEESGTMYSAHIQHRSLVKSQLLSL
AAKQEILWGQQCKLKWLCEGDEHTKFFHCLLAAKRRISNIVEVISNAESQTEIEGEFLKFYQHLFSKDKGKHYLLPSLQWDPISQDQKLALELPFTEEEILHQWTIIKKP
IEGLGIINVQLKNQAVLAKWVWRFHNKRDALWRKVIKTKYGSTLMDLKLGKKLIHSSHGPRRRLLKDEEIIDFQLPLASVSTTKIGLLSDSRKWALESSGLCSIKSLSRG
YFNVNFPHIAFLHQFVRFVGQQRILFNTFSYSRLAWKSLFSVFNLHWVFLENVLQLLIEPPLSAKSII