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Spg022428 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022428
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionsuccinate dehydrogenase subunit 7B, mitochondrial-like
Genome locationscaffold2:5402288..5403853
RNA-Seq ExpressionSpg022428
SyntenySpg022428
Gene Ontology termsGO:0005749 - mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0043495 - protein membrane anchor (molecular function)
InterPro domainsIPR034573 - Succinate dehydrogenase subunit 7, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135509.1 succinate dehydrogenase subunit 7B, mitochondrial-like [Momordica charantia]4.0e-2991.89Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA
        MAFFLN+TTLASHFRSQSQ DPSS+SRRGFHVE GTREKALLAEDPSLRRFRSHKKGVSRIKR+GD+LTIVVVA
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA

XP_022969157.1 succinate dehydrogenase subunit 7A, mitochondrial-like [Cucurbita maxima]1.5e-2891.89Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA
        MAF LNKTTLASHFRSQSQ DPS++SRRGFHVE GTREKALLAEDPSLRRFRSHKKGVSRIK+IGDVLTIVVVA
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA

XP_023529214.1 succinate dehydrogenase subunit 7B, mitochondrial-like [Cucurbita pepo subsp. pepo]6.8e-2993.24Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA
        MAF LNKTT ASHFRSQSQVDPSS+SRRGFHVE GTREKALLAEDPSLRRFRSHKKGVSRIK+IGDVLTIVVVA
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA

XP_031741717.1 succinate dehydrogenase subunit 7B, mitochondrial isoform X2 [Cucumis sativus]2.6e-2890.54Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA
        MAFFLNK+TLASHFRSQSQVDPSS+SRRGFHVE GTREKALLAEDP LRRFRSHKK VSR+KR+GDVLTIVVVA
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA

XP_038880267.1 succinate dehydrogenase subunit 7A, mitochondrial-like [Benincasa hispida]4.7e-3092.11Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVADG
        MAFFLNKTTLASHFRSQSQVDPSS+SRRGFHVE G REKALLAEDPSLRRF+SHKKGVSRIKRIGD+LTIVVVA G
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVADG

TrEMBL top hitse value%identityAlignment
A0A0A0LUC0 Uncharacterized protein1.3e-2890.54Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA
        MAFFLNK+TLASHFRSQSQVDPSS+SRRGFHVE GTREKALLAEDP LRRFRSHKK VSR+KR+GDVLTIVVVA
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA

A0A5D3BHH2 Succinate dehydrogenase subunit 7B1.4e-2787.01Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSI-SRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVADG
        MAFFLNK+TLASHFRSQSQVDPSS+ SRRGFHVE GTREKALLAEDP LRRFRSHKK VSR+K  GDVLTIVV+ADG
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSI-SRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVADG

A0A6J1C1M2 succinate dehydrogenase subunit 7B, mitochondrial-like1.9e-2991.89Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA
        MAFFLN+TTLASHFRSQSQ DPSS+SRRGFHVE GTREKALLAEDPSLRRFRSHKKGVSRIKR+GD+LTIVVVA
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA

A0A6J1F188 succinate dehydrogenase subunit 7B, mitochondrial-like3.7e-2891.89Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA
        MAF LNKT LAS FRSQSQVDPSS+SRRGFHVE GTREKALLAEDPSLRRFRSHKKGVSRIK+IGDVLTIVVVA
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA

A0A6J1HVK4 succinate dehydrogenase subunit 7A, mitochondrial-like7.4e-2991.89Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA
        MAF LNKTTLASHFRSQSQ DPS++SRRGFHVE GTREKALLAEDPSLRRFRSHKKGVSRIK+IGDVLTIVVVA
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA

SwissProt top hitse value%identityAlignment
Q3E870 Succinate dehydrogenase subunit 7B, mitochondrial9.3e-2166.23Show/hide
Query:  MAFFLNKTTLASHFRSQSQV---DPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA
        MAF LN  +++SH RS S     D  SISRRGFH+E GTREKALLAED +L+RF+SHKK V ++KRIGDVLT+VVVA
Subjt:  MAFFLNKTTLASHFRSQSQV---DPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA

Q6H611 Succinate dehydrogenase subunit 7, mitochondrial3.7e-0957.45Show/hide
Query:  RRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVV
        RRGFHVE G REKALL ED +L+RF+S+K  V ++ ++G++LT VV+
Subjt:  RRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVV

Q9C5E8 Succinate dehydrogenase subunit 7A, mitochondrial9.3e-2171.05Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSI--SRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA
        MAF LN T+++SH RS SQ    ++  SRRGFHVE G REKALLAED SLRRF+SHKKGV R+KRIGDVLT+VVVA
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSI--SRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA

Arabidopsis top hitse value%identityAlignment
AT3G47833.1 unknown protein6.6e-2271.05Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSI--SRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA
        MAF LN T+++SH RS SQ    ++  SRRGFHVE G REKALLAED SLRRF+SHKKGV R+KRIGDVLT+VVVA
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSI--SRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA

AT5G62575.1 unknown protein5.1e-2267.11Show/hide
Query:  MAFFLNKTTLASHFRSQSQV--DPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA
        MAF LN  +++SH RS S    D  SISRRGFH+E GTREKALLAED +L+RF+SHKK V ++KRIGDVLT+VVVA
Subjt:  MAFFLNKTTLASHFRSQSQV--DPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA

AT5G62575.2 unknown protein6.6e-2266.23Show/hide
Query:  MAFFLNKTTLASHFRSQSQV---DPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA
        MAF LN  +++SH RS S     D  SISRRGFH+E GTREKALLAED +L+RF+SHKK V ++KRIGDVLT+VVVA
Subjt:  MAFFLNKTTLASHFRSQSQV---DPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTTTTCCTCAACAAAACCACTCTTGCCTCTCATTTCCGATCTCAATCCCAGGTGGATCCTTCATCAATCTCGCGCCGTGGATTCCACGTCGAAACAGGGACTCG
TGAAAAGGCTTTATTAGCTGAGGACCCTTCTCTAAGGCGGTTCAGATCACACAAGAAAGGTGTCTCTCGAATCAAAAGAATTGGAGATGTTCTGACAATTGTGGTTGTTG
CAGATGGTGAGTGGTTTGAATCTTTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTTTTCCTCAACAAAACCACTCTTGCCTCTCATTTCCGATCTCAATCCCAGGTGGATCCTTCATCAATCTCGCGCCGTGGATTCCACGTCGAAACAGGGACTCG
TGAAAAGGCTTTATTAGCTGAGGACCCTTCTCTAAGGCGGTTCAGATCACACAAGAAAGGTGTCTCTCGAATCAAAAGAATTGGAGATGTTCTGACAATTGTGGTTGTTG
CAGATGGTGAGTGGTTTGAATCTTTTGAATGA
Protein sequenceShow/hide protein sequence
MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVADGEWFESFE