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Spg022440 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022440
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionlight-harvesting complex-like protein OHP2, chloroplastic
Genome locationscaffold2:11443384..11443908
RNA-Seq ExpressionSpg022440
SyntenySpg022440
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0009579 - thylakoid (cellular component)
GO:0016020 - membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016405.1 Light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.1e-0472.34Show/hide
Query:  ANASVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEGLL
        +++  +ASPS SA +SASSS AH SIRFS SKPFVFTIRSSQTEG L
Subjt:  ANASVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEGLL

XP_022939849.1 light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita moschata]1.1e-0470.21Show/hide
Query:  ANASVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEGLL
        +++  +ASPS SA +SASSS AH SIRFS +KPFVFTIRSSQTEG L
Subjt:  ANASVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEGLL

XP_022990469.1 light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita maxima]8.5e-0569.57Show/hide
Query:  LANASVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEG
        ++++S + SPS SAV+S SSS AH SIRFS SKPFVFTIRSSQT+G
Subjt:  LANASVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEG

XP_022993308.1 light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita maxima]5.0e-0572.34Show/hide
Query:  ANASVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEGLL
        +++  +ASPS SA +SASSS AH SIRFS SKPFVFTIRSSQTEG L
Subjt:  ANASVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEGLL

XP_023551626.1 light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita pepo subsp. pepo]5.0e-0572.34Show/hide
Query:  ANASVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEGLL
        +++  +ASPS SA +SASSS AH SIRFS SKPFVFTIRSSQTEG L
Subjt:  ANASVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEGLL

TrEMBL top hitse value%identityAlignment
A0A6J1BW66 light-harvesting complex-like protein OHP2, chloroplastic9.1e-0577.27Show/hide
Query:  SVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEGLL
        S + SPS SA ASASSS  H SIRFS SKPFVFTIRSSQTEG L
Subjt:  SVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEGLL

A0A6J1FIC8 light-harvesting complex-like protein OHP2, chloroplastic5.3e-0570.21Show/hide
Query:  ANASVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEGLL
        +++  +ASPS SA +SASSS AH SIRFS +KPFVFTIRSSQTEG L
Subjt:  ANASVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEGLL

A0A6J1HG91 light-harvesting complex-like protein OHP2, chloroplastic1.2e-0467.39Show/hide
Query:  LANASVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEG
        ++++S + SPS SA +S SSS AH SIRFS SKPFVFTIRSSQT+G
Subjt:  LANASVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEG

A0A6J1JS47 light-harvesting complex-like protein OHP2, chloroplastic4.1e-0569.57Show/hide
Query:  LANASVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEG
        ++++S + SPS SAV+S SSS AH SIRFS SKPFVFTIRSSQT+G
Subjt:  LANASVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEG

A0A6J1K1U3 light-harvesting complex-like protein OHP2, chloroplastic2.4e-0572.34Show/hide
Query:  ANASVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEGLL
        +++  +ASPS SA +SASSS AH SIRFS SKPFVFTIRSSQTEG L
Subjt:  ANASVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEGLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTGGCCAATGCTTCCGTCAGCGCTTCTCCATCGGGGTCAGCTGTTGCTTCCGCATCTTCATCGTTGGCTCACTGTTCCATTAGATTCTCTCCCTCCAAGCCTTT
CGTCTTCACCATTCGAAGCTCTCAGACTGAAGGCCTCTTAGAAGACCAACGTCTGGATGTGCGTGTTTGTGGTGTTTCCGACGAGTCTCGGGCTAATTTTTTCCAGATCT
GGGTGTTGCCGGCGAGACCCACAATTGTGAGTGTTCCTTCCTCGACGAGATTTGGGTGTTTCTGCGAGACCCATGTTCGGCAGTGTAAATCATTCCAGATCCATCGATTT
ACGCTTCAACGAGCTCCGGGTCCATCGTTCCAGCCATCCTCGACGAGATCTGGGTGTTTCTGCGAGACCCATGTTCGGCAGTGTAAATCATTCCAGATCCATCGATTTAC
GCTTCAACGAGCTCCGCGTCCATCGTTCCAGCCACGTCGAATCCATTGGCAGCGTATATCTGGAACGAGCCACCGCCGGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTGGCCAATGCTTCCGTCAGCGCTTCTCCATCGGGGTCAGCTGTTGCTTCCGCATCTTCATCGTTGGCTCACTGTTCCATTAGATTCTCTCCCTCCAAGCCTTT
CGTCTTCACCATTCGAAGCTCTCAGACTGAAGGCCTCTTAGAAGACCAACGTCTGGATGTGCGTGTTTGTGGTGTTTCCGACGAGTCTCGGGCTAATTTTTTCCAGATCT
GGGTGTTGCCGGCGAGACCCACAATTGTGAGTGTTCCTTCCTCGACGAGATTTGGGTGTTTCTGCGAGACCCATGTTCGGCAGTGTAAATCATTCCAGATCCATCGATTT
ACGCTTCAACGAGCTCCGGGTCCATCGTTCCAGCCATCCTCGACGAGATCTGGGTGTTTCTGCGAGACCCATGTTCGGCAGTGTAAATCATTCCAGATCCATCGATTTAC
GCTTCAACGAGCTCCGCGTCCATCGTTCCAGCCACGTCGAATCCATTGGCAGCGTATATCTGGAACGAGCCACCGCCGGAGCTAG
Protein sequenceShow/hide protein sequence
MGLANASVSASPSGSAVASASSSLAHCSIRFSPSKPFVFTIRSSQTEGLLEDQRLDVRVCGVSDESRANFFQIWVLPARPTIVSVPSSTRFGCFCETHVRQCKSFQIHRF
TLQRAPGPSFQPSSTRSGCFCETHVRQCKSFQIHRFTLQRAPRPSFQPRRIHWQRISGTSHRRS