; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022454 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022454
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMediator of RNA polymerase II transcription subunit 17
Genome locationscaffold2:6637714..6639541
RNA-Seq ExpressionSpg022454
SyntenySpg022454
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0070847 - core mediator complex (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
InterPro domainsIPR019313 - Mediator complex, subunit Med17


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589859.1 Mediator of RNA polymerase II transcription subunit 17, partial [Cucurbita argyrosperma subsp. sororia]2.2e-7489.76Show/hide
Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVS+DKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK+SKES+TPW WQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
        DAVTVAGMTRPKPLPNEVLSDLGVS   ++      +HLGKYFKQSAKGLERQVAREARFYGALIR
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
KAG7023531.1 Mediator of RNA polymerase II transcription subunit 17 [Cucurbita argyrosperma subsp. argyrosperma]2.2e-7489.76Show/hide
Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVS+DKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK+SKES+TPW WQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
        DAVTVAGMTRPKPLPNEVLSDLGVS   ++      +HLGKYFKQSAKGLERQVAREARFYGALIR
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
XP_022145057.1 mediator of RNA polymerase II transcription subunit 17 [Momordica charantia]3.0e-7692.17Show/hide
Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVSLDKLPVKRLEAIEENGLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
        DAVTVAGMTRPKPLPNEVLSDLGVS   ++      +HLGKYFKQSAKGLERQVAREARFYGALIR
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
XP_022987637.1 mediator of RNA polymerase II transcription subunit 17-like [Cucurbita maxima]9.7e-7590.36Show/hide
Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK+SKES+TPW WQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
        DAVTVAGMTRPKPLPNEVLSDLGVS   ++      +HLGKYFKQSAKGLERQVAREARFYGALIR
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
XP_023516123.1 mediator of RNA polymerase II transcription subunit 17-like [Cucurbita pepo subsp. pepo]9.7e-7590.36Show/hide
Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK+SKES+TPW WQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
        DAVTVAGMTRPKPLPNEVLSDLGVS   ++      +HLGKYFKQSAKGLERQVAREARFYGALIR
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
TrEMBL top hitse value%identityAlignment
A0A0A0KXX2 Mediator of RNA polymerase II transcription subunit 171.8e-7490.36Show/hide
Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MD DMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPW WQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
        DAVTVAGMTRPKPLPNEVL+DLGVS   ++      +HLGKYFKQSAKGLERQVAREARFYGALIR
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
A0A6J1CVE8 Mediator of RNA polymerase II transcription subunit 171.5e-7692.17Show/hide
Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVSLDKLPVKRLEAIEENGLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
        DAVTVAGMTRPKPLPNEVLSDLGVS   ++      +HLGKYFKQSAKGLERQVAREARFYGALIR
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
A0A6J1H995 Mediator of RNA polymerase II transcription subunit 171.4e-7489.76Show/hide
Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK+SKES+TPW WQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
        DAVTV GMTRPKPLPNEVLSDLGVS   ++      +HLGKYFKQSAKGLERQVAREARFYGALIR
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
A0A6J1JAW7 Mediator of RNA polymerase II transcription subunit 174.7e-7590.36Show/hide
Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK+SKES+TPW WQ+MIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
        DAVTVAGMTRPKPLPNEVLSDLGVS   ++      +HLGKYFKQSAKGLERQVAREARFYGALIR
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
A0A6J1KUD0 mediator of RNA polymerase II transcription subunit 17-like3.0e-7489.16Show/hide
Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGD+ VSLDKLP+KRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
        DA+TVAGMTRPK LPNE LSDLGVS   ++      +HLGKYFKQSAKGLERQVAREARFYGALIR
Subjt:  DAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
SwissProt top hitse value%identityAlignment
F4K460 Mediator of RNA polymerase II transcription subunit 176.3e-6170.24Show/hide
Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVE
        MD DM++SLD+LP+KRLE+IEENG ERFPSDV Y++KR+SLIRRIDFAWA+E++D+  KKKQKKSSK+S   W W+ M+ENLQLAHQEL+VIIDLI+TV+
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVE

Query:  ANDAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
        ANDAVTVAGMTRPKP+PNE+LSDL VS    +      ++LG YFKQSAK LE+++ REARFYGALIR
Subjt:  ANDAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
Arabidopsis top hitse value%identityAlignment
AT5G20170.1 RNA polymerase II transcription mediators4.5e-6270.24Show/hide
Query:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVE
        MD DM++SLD+LP+KRLE+IEENG ERFPSDV Y++KR+SLIRRIDFAWA+E++D+  KKKQKKSSK+S   W W+ M+ENLQLAHQEL+VIIDLI+TV+
Subjt:  MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVE

Query:  ANDAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR
        ANDAVTVAGMTRPKP+PNE+LSDL VS    +      ++LG YFKQSAK LE+++ REARFYGALIR
Subjt:  ANDAVTVAGMTRPKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGAGACATGAAAGTTTCTCTCGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAAGAAAACGGCCTCGAACGATTCCCATCAGACGTAGGTTATGAAGAGAA
ACGGTTGTCGCTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAAGAGAGTTCAACGCCGTGGCCATGGC
AGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTCATCAACACCGTAGAAGCTAATGATGCAGTAACAGTGGCTGGCATGACAAGG
CCAAAACCATTACCTAATGAAGTTTTATCAGATCTTGGAGTGTCTTGCCTTATTTTATCTCCTACCCCTTACTCTCTACAGCATCTTGGTAAATATTTCAAGCAGTCAGC
TAAAGGTTTGGAACGCCAGGTTGCAAGGGAAGCAAGGTTTTATGGTGCTCTAATTCGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGGAGACATGAAAGTTTCTCTCGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAAGAAAACGGCCTCGAACGATTCCCATCAGACGTAGGTTATGAAGAGAA
ACGGTTGTCGCTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAAGAGAGTTCAACGCCGTGGCCATGGC
AGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTCATCAACACCGTAGAAGCTAATGATGCAGTAACAGTGGCTGGCATGACAAGG
CCAAAACCATTACCTAATGAAGTTTTATCAGATCTTGGAGTGTCTTGCCTTATTTTATCTCCTACCCCTTACTCTCTACAGCATCTTGGTAAATATTTCAAGCAGTCAGC
TAAAGGTTTGGAACGCCAGGTTGCAAGGGAAGCAAGGTTTTATGGTGCTCTAATTCGGTAA
Protein sequenceShow/hide protein sequence
MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTR
PKPLPNEVLSDLGVSCLILSPTPYSLQHLGKYFKQSAKGLERQVAREARFYGALIR