; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022468 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022468
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description39S ribosomal protein L47, mitochondrial
Genome locationscaffold2:5446834..5453706
RNA-Seq ExpressionSpg022468
SyntenySpg022468
Gene Ontology termsGO:0032543 - mitochondrial translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR010729 - Ribosomal protein L47, mitochondrial
IPR036049 - Ribosomal protein L29/L35 superfamily
IPR038340 - MRP-L47 superfamily, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138121.1 39S ribosomal protein L47, mitochondrial [Cucumis sativus]7.1e-6172.58Show/hide
Query:  MFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSR
        MFLTRVFGRTFLAAARSETSSA AAAA+TARTGYNPLEEFFEA+RSPDD KPVVYG                                           R
Subjt:  MFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSR

Query:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL
        SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNL+FPNPERIPKVRKSMCRIK VLTERAI+EPDPRRS EMKRMINAL
Subjt:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL

XP_008453113.1 PREDICTED: 39S ribosomal protein L47, mitochondrial [Cucumis melo]2.7e-6072.58Show/hide
Query:  MFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSR
        MFLTRVFGRTFLAAARSETSSA AAAA+TARTGYNPLEEFFEA+RSPDD KPVVYG                                           R
Subjt:  MFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSR

Query:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL
        SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERI KVRKSMCRIK VLTERAI+EPDPRRS EMKRMINAL
Subjt:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL

XP_022968794.1 39S ribosomal protein L47, mitochondrial-like [Cucurbita maxima]4.6e-6070.97Show/hide
Query:  MFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSR
        M LTR+FGRTFLAAARSETS+A AAA STARTGYNPLEEFFEA RSPDDDKPVVYG                                           R
Subjt:  MFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSR

Query:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL
        SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAI+EPDPRR  E+KRM+NAL
Subjt:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL

XP_023530690.1 39S ribosomal protein L47, mitochondrial-like [Cucurbita pepo subsp. pepo]3.5e-6070.97Show/hide
Query:  MFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSR
        MFLTR+FGRTFLAAARSE S+A AAA STARTGYNPLEEFFE  RSP+DDKPVVYG                                           R
Subjt:  MFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSR

Query:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL
        SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAI+EPDPRRS EMKRM+NAL
Subjt:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL

XP_038879389.1 39S ribosomal protein L47, mitochondrial [Benincasa hispida]1.9e-6173.12Show/hide
Query:  MFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSR
        MFLTRVFGRTFLAAARSETSSA  AAA+TAR GYNPLEEFFEA+RSPDDDKPVVYG                                           R
Subjt:  MFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSR

Query:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL
        SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAI+EPDPRRS EMKRMINAL
Subjt:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL

TrEMBL top hitse value%identityAlignment
A0A0A0LS48 Uncharacterized protein3.5e-6172.58Show/hide
Query:  MFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSR
        MFLTRVFGRTFLAAARSETSSA AAAA+TARTGYNPLEEFFEA+RSPDD KPVVYG                                           R
Subjt:  MFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSR

Query:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL
        SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNL+FPNPERIPKVRKSMCRIK VLTERAI+EPDPRRS EMKRMINAL
Subjt:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL

A0A1S3BWK4 39S ribosomal protein L47, mitochondrial1.3e-6072.58Show/hide
Query:  MFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSR
        MFLTRVFGRTFLAAARSETSSA AAAA+TARTGYNPLEEFFEA+RSPDD KPVVYG                                           R
Subjt:  MFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSR

Query:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL
        SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERI KVRKSMCRIK VLTERAI+EPDPRRS EMKRMINAL
Subjt:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL

A0A6A4LEM1 Uncharacterized protein (Fragment)1.1e-5970.97Show/hide
Query:  MFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSR
        MF++R FGRTFLAAA+SETS+AAAAA STARTGYNPLEEFFE +RS +DDKPVVYG            +  S +  + +     L   +   SL +   R
Subjt:  MFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSR

Query:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL
        SWKASELRLKSWDDLNKLWYVLLKEKNMLM+QRQMLNAQNLRFPNPERIPKVRKSMCRIK VLTERAIEE DPRRS EMKRM+NAL
Subjt:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL

A0A6J1I0P6 39S ribosomal protein L47, mitochondrial-like2.2e-6070.97Show/hide
Query:  MFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSR
        M LTR+FGRTFLAAARSETS+A AAA STARTGYNPLEEFFEA RSPDDDKPVVYG                                           R
Subjt:  MFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSR

Query:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL
        SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAI+EPDPRR  E+KRM+NAL
Subjt:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL

A0A6J1JCZ2 39S ribosomal protein L47, mitochondrial8.5e-6072.58Show/hide
Query:  MFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSR
        MFLTRV GR FLAAARSETSS AAAAASTA TGYNPLEEFFEA+RSPDDDKPVVYG                                           R
Subjt:  MFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSR

Query:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL
        SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAI+EPDPRRS EMKRM+NAL
Subjt:  SWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL

SwissProt top hitse value%identityAlignment
P87232 54S ribosomal protein L4, mitochondrial1.7e-0948.72Show/hide
Query:  PGSLEIFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFP--NPERIPKVRKSMCRIKQVLTER
        P S E  F R+W A ELR KS++DL+ LWY  L+EKN+L TQR  +    L  P  + ER+  V K+M  IK VL ER
Subjt:  PGSLEIFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFP--NPERIPKVRKSMCRIKQVLTER

Q08DT6 39S ribosomal protein L47, mitochondrial5.4e-1144.19Show/hide
Query:  LDALLASRKGPGSLEIFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTER
        L+      K  G  ++    SW   +LR KS +DL+KLWYVLLKE+NML+T  Q    Q L  P+PER+ KV  SM  + +V+ ER
Subjt:  LDALLASRKGPGSLEIFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTER

Q2H080 54S ribosomal protein L4, mitochondrial4.3e-0850Show/hide
Query:  RSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNP---ERIPKVRKSMCRIKQVLTER
        RSW A ELR KSWDDL++LW+V  KE+N + T     N   L F      ER   VR++M  IK VLTER
Subjt:  RSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNP---ERIPKVRKSMCRIKQVLTER

Q8K2Y7 39S ribosomal protein L47, mitochondrial3.2e-1144.19Show/hide
Query:  LDALLASRKGPGSLEIFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTER
        L+      K  G  ++    SW   +LR KS +DL+KLWYVLLKE+NML+T  Q    Q L  P+PER+ KV  SM  + +V+ ER
Subjt:  LDALLASRKGPGSLEIFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTER

Q9HD33 39S ribosomal protein L47, mitochondrial1.2e-1043.02Show/hide
Query:  LDALLASRKGPGSLEIFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTER
        L+      K  G  ++    +W   +LR KS +DL+KLWYVLLKE+NML+T  Q    Q L  P+PER+ KV  SM  + +V+ ER
Subjt:  LDALLASRKGPGSLEIFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTER

Arabidopsis top hitse value%identityAlignment
AT1G07830.1 ribosomal protein L29 family protein1.4e-5162.77Show/hide
Query:  MFLTRVFGRTFLAA--ARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFF
        MFLTR  GR FLAA  ARSE S+ AAAAAST RT  NPLEEFFE +RS D+DKPVVYG                                          
Subjt:  MFLTRVFGRTFLAA--ARSETSSAAAAAASTARTGYNPLEEFFEAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFF

Query:  SRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL
         R WKASELRLKSWDDL KLWYVLLKEKNMLMTQRQML AQN++FPNPERIPKVR+SMCRIK VLTERAIEEPD RRS EMKRM+N +
Subjt:  SRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPKVRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATTGCTGTTGAGCGCTTTATCCTCAGTTCCCTCGCACTTCGCAGACCTTCGTCGCCGCTCACTCGCCGGAGCGCAGATCGTTGCCGCTTGCCGGAGCCAAGCCT
CTTTGAGCCTTCGCAGTTCACAATCTATCCCATCTGGGTTCAGTCCGTCGCATTGTGGTACGGCCGCAACCTTCAGAATCAGAGCATTGGTGCAGCCATGTTTCTGACAC
GAGTGTTTGGGAGAACATTTCTAGCTGCTGCTAGATCAGAAACTTCTTCTGCAGCAGCTGCTGCTGCTTCTACAGCCAGGACAGGGTATAATCCACTCGAGGAGTTTTTT
GAGGCAGAGAGAAGTCCAGACGACGACAAACCTGTTGTATATGGCTTAGATACTTGTGTGAGACCCGGATGCCCATGGATGACAAATGAATCCTCATACTCATGGACACA
GATTATTCTGGATGCTTTACTTGCAAGTAGAAAAGGCCCTGGTAGCTTGGAAATTTTCTTCAGTCGAAGTTGGAAGGCTTCAGAACTACGGCTTAAGTCTTGGGACGATC
TCAATAAGCTATGGTATGTCCTGTTGAAGGAGAAAAATATGTTGATGACACAGCGCCAGATGCTTAATGCACAAAATCTAAGGTTTCCTAATCCAGAACGCATTCCCAAG
GTGAGGAAGTCAATGTGTCGAATCAAGCAAGTACTTACCGAGAGAGCCATCGAAGAACCAGATCCTCGGAGATCTGGAGAGATGAAGAGGATGATAAATGCTCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAATTGCTGTTGAGCGCTTTATCCTCAGTTCCCTCGCACTTCGCAGACCTTCGTCGCCGCTCACTCGCCGGAGCGCAGATCGTTGCCGCTTGCCGGAGCCAAGCCT
CTTTGAGCCTTCGCAGTTCACAATCTATCCCATCTGGGTTCAGTCCGTCGCATTGTGGTACGGCCGCAACCTTCAGAATCAGAGCATTGGTGCAGCCATGTTTCTGACAC
GAGTGTTTGGGAGAACATTTCTAGCTGCTGCTAGATCAGAAACTTCTTCTGCAGCAGCTGCTGCTGCTTCTACAGCCAGGACAGGGTATAATCCACTCGAGGAGTTTTTT
GAGGCAGAGAGAAGTCCAGACGACGACAAACCTGTTGTATATGGCTTAGATACTTGTGTGAGACCCGGATGCCCATGGATGACAAATGAATCCTCATACTCATGGACACA
GATTATTCTGGATGCTTTACTTGCAAGTAGAAAAGGCCCTGGTAGCTTGGAAATTTTCTTCAGTCGAAGTTGGAAGGCTTCAGAACTACGGCTTAAGTCTTGGGACGATC
TCAATAAGCTATGGTATGTCCTGTTGAAGGAGAAAAATATGTTGATGACACAGCGCCAGATGCTTAATGCACAAAATCTAAGGTTTCCTAATCCAGAACGCATTCCCAAG
GTGAGGAAGTCAATGTGTCGAATCAAGCAAGTACTTACCGAGAGAGCCATCGAAGAACCAGATCCTCGGAGATCTGGAGAGATGAAGAGGATGATAAATGCTCTGTGA
Protein sequenceShow/hide protein sequence
MSIAVERFILSSLALRRPSSPLTRRSADRCRLPEPSLFEPSQFTIYPIWVQSVALWYGRNLQNQSIGAAMFLTRVFGRTFLAAARSETSSAAAAAASTARTGYNPLEEFF
EAERSPDDDKPVVYGLDTCVRPGCPWMTNESSYSWTQIILDALLASRKGPGSLEIFFSRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLNAQNLRFPNPERIPK
VRKSMCRIKQVLTERAIEEPDPRRSGEMKRMINAL