; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022470 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022470
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionlamin-like protein
Genome locationscaffold2:11072245..11073664
RNA-Seq ExpressionSpg022470
SyntenySpg022470
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0009055 - electron transfer activity (molecular function)
InterPro domainsIPR003245 - Phytocyanin domain
IPR008972 - Cupredoxin
IPR039391 - Phytocyanin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008451094.1 PREDICTED: lamin-like protein [Cucumis melo]9.4e-6575.43Show/hide
Query:  MAAETVTVAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRD
        MAA+ V    +   VV  GWLLCGVEG+QPVLH VGGGK TWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENC DKDFIFNIT+GGRD
Subjt:  MAAETVTVAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRD

Query:  VFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSP--ISPPKLPKIS-NLSPSIQPLLSLPFLLLTIAFTSFL
        VFNLTEAK YYFLSG GFCFQGMK+AVFVE++ T  P  ISPP LPK + NLSPS++PLL +PF  L +    FL
Subjt:  VFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSP--ISPPKLPKIS-NLSPSIQPLLSLPFLLLTIAFTSFL

XP_022157364.1 lamin-like protein [Momordica charantia]7.7e-6779.64Show/hide
Query:  VAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRDVFNLTEA
        V A AVA+VA GWLLCGVEGR P+LHRVGGGK TW  N+NFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVN+TSYE+C +KDFIFNITRGGRDVFNLT+A
Subjt:  VAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRDVFNLTEA

Query:  KPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSI-QPLLSLPFLLLTIA--FTSF
        KPYYFLSG GFC+QGMKLAVFVE+ P ++  SPP LPK+SNLSPSI QPL SLP LL TI   F SF
Subjt:  KPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSI-QPLLSLPFLLLTIA--FTSF

XP_022988228.1 lamin-like protein [Cucurbita maxima]3.9e-6374.71Show/hide
Query:  MAAETVTVAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRD
        M AE  TV  V V V  AGWLL GV+GRQPVLHRVGGGK TWTTNINFTDWSIHEHFYVGDWLYFGFDK IYNVL+VNKTSY++C + DF+FN+TRGGRD
Subjt:  MAAETVTVAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRD

Query:  VFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSIQPL--LSLPFLLLTIAFTSFL
        VFNLT+AKPYYFLSG GFCFQGMK+A+FVED P   PIS    PKI+N S SIQPL  LS   L +TIAFT FL
Subjt:  VFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSIQPL--LSLPFLLLTIAFTSFL

XP_023516910.1 lamin-like protein [Cucurbita pepo subsp. pepo]2.6e-6272.99Show/hide
Query:  MAAETVTVAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRD
        M  E  TVA VAV V  AGWLL GVEGR+PVLHRVGGGK TWTTN+NFTDWSIHEHFYVGDWLYFGFDK IYNVL+VNKTSY++C + DF+FN+TRGGRD
Subjt:  MAAETVTVAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRD

Query:  VFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSIQPL--LSLPFLLLTIAFTSFL
        VFNLT+AKPYYFLSG GFCFQGMK+A+FVED P   PIS    P+ISN S SIQPL  LS   +L+T+AFT  +
Subjt:  VFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSIQPL--LSLPFLLLTIAFTSFL

XP_038880463.1 lamin-like protein [Benincasa hispida]2.3e-6377.11Show/hide
Query:  MAAETVTVAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRD
        MA E VT     VA+  AGWLL G EGRQPVLHRVGGGK TWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYE+C DK FIFN+TRGGRD
Subjt:  MAAETVTVAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRD

Query:  VFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSIQPLLSLPFLLLTI
        VFNLTEAK YYFLSG GFCFQGMK+AVFVE+ P    +SPP LP + N SPS+QPL+  PFL L I
Subjt:  VFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSIQPLLSLPFLLLTI

TrEMBL top hitse value%identityAlignment
A0A1S3BQT0 lamin-like protein4.5e-6575.43Show/hide
Query:  MAAETVTVAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRD
        MAA+ V    +   VV  GWLLCGVEG+QPVLH VGGGK TWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENC DKDFIFNIT+GGRD
Subjt:  MAAETVTVAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRD

Query:  VFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSP--ISPPKLPKIS-NLSPSIQPLLSLPFLLLTIAFTSFL
        VFNLTEAK YYFLSG GFCFQGMK+AVFVE++ T  P  ISPP LPK + NLSPS++PLL +PF  L +    FL
Subjt:  VFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSP--ISPPKLPKIS-NLSPSIQPLLSLPFLLLTIAFTSFL

A0A2P6QEZ3 Putative cupredoxin9.5e-4775Show/hide
Query:  VEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRDVFNLTEAKPYYFLSGGGFCFQGMK
        VE R+PVLHRVGGG+ TW  +INFTDWS  EHFYVGDWLYFGFDKHIYNVLEVN+TSYENC DK++I+N+TRGGRDVFNLTEAK YYFL G G+C++GMK
Subjt:  VEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRDVFNLTEAKPYYFLSGGGFCFQGMK

Query:  LAVFVEDFPTSSPISP
        +AVFVE  P     SP
Subjt:  LAVFVEDFPTSSPISP

A0A6J1DWA4 lamin-like protein3.7e-6779.64Show/hide
Query:  VAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRDVFNLTEA
        V A AVA+VA GWLLCGVEGR P+LHRVGGGK TW  N+NFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVN+TSYE+C +KDFIFNITRGGRDVFNLT+A
Subjt:  VAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRDVFNLTEA

Query:  KPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSI-QPLLSLPFLLLTIA--FTSF
        KPYYFLSG GFC+QGMKLAVFVE+ P ++  SPP LPK+SNLSPSI QPL SLP LL TI   F SF
Subjt:  KPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSI-QPLLSLPFLLLTIA--FTSF

A0A6J1HAJ6 lamin-like protein1.6e-6272.99Show/hide
Query:  MAAETVTVAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRD
        M  E  TV  VAV V  AGWLL GVEGR+PVLHRVGGGK TWTTN+NFTDWSIHEHFYVGDWLYFGFDK IYNVL+VNKTSY++C + DF+FN+TRGGRD
Subjt:  MAAETVTVAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRD

Query:  VFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSIQPL--LSLPFLLLTIAFTSFL
        VFNLT+AKPYYFLSG GFCFQGMK+A+FVED P   PIS    PKISN S SIQPL  LS   +L+T+AFT  +
Subjt:  VFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSIQPL--LSLPFLLLTIAFTSFL

A0A6J1JLN0 lamin-like protein1.9e-6374.71Show/hide
Query:  MAAETVTVAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRD
        M AE  TV  V V V  AGWLL GV+GRQPVLHRVGGGK TWTTNINFTDWSIHEHFYVGDWLYFGFDK IYNVL+VNKTSY++C + DF+FN+TRGGRD
Subjt:  MAAETVTVAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRD

Query:  VFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSIQPL--LSLPFLLLTIAFTSFL
        VFNLT+AKPYYFLSG GFCFQGMK+A+FVED P   PIS    PKI+N S SIQPL  LS   L +TIAFT FL
Subjt:  VFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSIQPL--LSLPFLLLTIAFTSFL

SwissProt top hitse value%identityAlignment
Q39131 Lamin-like protein1.4e-2341.86Show/hide
Query:  MAAETVTVAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRG-GR
        MA  TV + AV +A + A   + GV  ++   + VG  K  W  NIN+T W+  +HFY+GDWLYF FD++ +N+LEVNKT YE CI    I N TRG GR
Subjt:  MAAETVTVAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRG-GR

Query:  DVFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSIQPLLSLPFLLLTIAFTSF
        D+  L + K YY L G G C+ GMKL+V VE  P      PPK   + N+  S+  +  L   ++ ++  +F
Subjt:  DVFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSIQPLLSLPFLLLTIAFTSF

Q9T076 Early nodulin-like protein 24.4e-0939.58Show/hide
Query:  GGKNTWTTN--INFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRDVFNLTEAKPYYFLSGG-GFCFQGMKLAVFV
        GG   W TN   N+  WS    F V D LYF + K   +VLEVNK  Y+ C  K+ I  +  G  ++ +L    P+YF+SG    C +G KL V V
Subjt:  GGKNTWTTN--INFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRDVFNLTEAKPYYFLSGG-GFCFQGMKLAVFV

Arabidopsis top hitse value%identityAlignment
AT2G27035.1 early nodulin-like protein 206.1e-3851.39Show/hide
Query:  LHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRDVFNLTEAKPYYFLSGGGFCFQGMKLAVFVED
        LHRVGGG+ TW +++NF+DW+ H+ FY GDWLYFGF++  +N+L+VNK+SYE C+D D+IFNITRGGRDVF L E KPYYF+ G G+C +GMKLA+    
Subjt:  LHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRDVFNLTEAKPYYFLSGGGFCFQGMKLAVFVED

Query:  FPTSSPISPPKLPKISNLSPSIQPLL---SLPFLLLTIAFTSFL
          T  P  PP  P  +N + +  PL+   ++   +L  AF + L
Subjt:  FPTSSPISPPKLPKISNLSPSIQPLL---SLPFLLLTIAFTSFL

AT3G01070.1 early nodulin-like protein 161.8e-2142.54Show/hide
Query:  VAVVAAGWLLCGVEGRQPVLHR--VGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRG-GRDVFNLTEAKP
        VAV+ AG +L  +     V  +    G    W  NIN+T W+  +HFY+ DWLYF ++++ YNV+EVN+T+Y +C   + I N +RG GRD+ +L   + 
Subjt:  VAVVAAGWLLCGVEGRQPVLHR--VGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRG-GRDVFNLTEAKP

Query:  YYFLSG-GGFCFQGMKLAVFVEDFPTSSPISPPK
        YY +SG GG C+ GMKLAV VE  P     +P K
Subjt:  YYFLSG-GGFCFQGMKLAVFVEDFPTSSPISPPK

AT4G12880.1 early nodulin-like protein 199.2e-2653.77Show/hide
Query:  GGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRG-GRDVFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTS
        G K  W  NIN+T W+  +HFYVGDWLYF F +  +N+LEVNK  YE CI    I N TRG GRD+  L E + YY L G G C QGMKL V VE  P  
Subjt:  GGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRG-GRDVFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTS

Query:  SPISPP
         P +PP
Subjt:  SPISPP

AT4G12880.2 early nodulin-like protein 196.2e-1448.84Show/hide
Query:  FYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRG-GRDVFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPP
        F+    L F F +  +N+LEVNK  YE CI    I N TRG GRD+  L E + YY L G G C QGMKL V VE  P   P +PP
Subjt:  FYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRG-GRDVFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPP

AT5G15350.1 early nodulin-like protein 171.0e-2441.86Show/hide
Query:  MAAETVTVAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRG-GR
        MA  TV + AV +A + A   + GV  ++   + VG  K  W  NIN+T W+  +HFY+GDWLYF FD++ +N+LEVNKT YE CI    I N TRG GR
Subjt:  MAAETVTVAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRG-GR

Query:  DVFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSIQPLLSLPFLLLTIAFTSF
        D+  L + K YY L G G C+ GMKL+V VE  P      PPK   + N+  S+  +  L   ++ ++  +F
Subjt:  DVFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSIQPLLSLPFLLLTIAFTSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCGGAGACGGTGACCGTGGCGGCAGTGGCGGTGGCGGTCGTGGCGGCCGGGTGGTTGTTATGTGGTGTTGAGGGTAGACAGCCAGTGTTGCATAGGGTTGGAGG
AGGAAAAAACACTTGGACAACTAATATTAACTTCACTGATTGGTCAATTCATGAGCACTTTTATGTTGGTGATTGGCTTTATTTCGGGTTCGATAAACACATCTACAACG
TGCTAGAAGTGAACAAAACGAGCTACGAGAATTGCATCGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGGGATGTGTTCAACCTAACAGAAGCAAAGCCATAC
TACTTTCTAAGTGGAGGAGGCTTTTGTTTTCAAGGAATGAAGCTTGCTGTCTTTGTTGAAGATTTTCCCACTTCTTCTCCCATTTCACCACCAAAATTACCCAAAATTTC
CAATCTTTCTCCATCTATACAACCATTATTATCTTTGCCCTTCTTGCTACTCACCATTGCCTTCACTTCCTTCCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCGGAGACGGTGACCGTGGCGGCAGTGGCGGTGGCGGTCGTGGCGGCCGGGTGGTTGTTATGTGGTGTTGAGGGTAGACAGCCAGTGTTGCATAGGGTTGGAGG
AGGAAAAAACACTTGGACAACTAATATTAACTTCACTGATTGGTCAATTCATGAGCACTTTTATGTTGGTGATTGGCTTTATTTCGGGTTCGATAAACACATCTACAACG
TGCTAGAAGTGAACAAAACGAGCTACGAGAATTGCATCGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGGGATGTGTTCAACCTAACAGAAGCAAAGCCATAC
TACTTTCTAAGTGGAGGAGGCTTTTGTTTTCAAGGAATGAAGCTTGCTGTCTTTGTTGAAGATTTTCCCACTTCTTCTCCCATTTCACCACCAAAATTACCCAAAATTTC
CAATCTTTCTCCATCTATACAACCATTATTATCTTTGCCCTTCTTGCTACTCACCATTGCCTTCACTTCCTTCCTTTAG
Protein sequenceShow/hide protein sequence
MAAETVTVAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRDVFNLTEAKPY
YFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSIQPLLSLPFLLLTIAFTSFL