; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022488 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022488
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationscaffold2:15326577..15329281
RNA-Seq ExpressionSpg022488
SyntenySpg022488
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]2.0e-8437.59Show/hide
Query:  IVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIPDDTCLE-----------------------WN
        I+ +P S LS VLKGRYF   +F++A     PSYIWRS++WG++LL KG+RWRIGNG+ V +YG NW+P+   L+                       W 
Subjt:  IVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIPDDTCLE-----------------------WN

Query:  EELLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGYRLGQV-TLLAQTPFSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDN
         ++++  F+P E + IL+IP+   + ED++IW+ EK G+Y+++SGY++  +     Q P SSS E +  WW G WKM IPNKIK+F WRLCL+RLPT  N
Subjt:  EELLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGYRLGQV-TLLAQTPFSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDN

Query:  LSVRGIDVLNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFRGWVPSV-----
        LS RG+++ N C  CG +GE  +HLFW CKF   + + S++  L       S   +LR   + +  A FEEL VV+W +W  RN + F     +V     
Subjt:  LSVRGIDVLNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFRGWVPSV-----

Query:  GLVDWTVNYLAVFRGASRTYCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVV
         LV+W   Y   FR A      G R    + + W P +EG YK+N DA++      AG G+++ ++ G+VM +AT   +++ + D+AE +  V+G++L  
Subjt:  GLVDWTVNYLAVFRGASRTYCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVV

Query:  EMDLVLVILEIDSMRVYSLLQEPAMVDLSELDVLVSEAR
        E+ +                  PA+ DLSE   +V +A+
Subjt:  EMDLVLVILEIDSMRVYSLLQEPAMVDLSELDVLVSEAR

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]7.5e-5530.57Show/hide
Query:  IVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIP------------------------DDTCLEW
        ++  P S ++ + K RY+P G+   A  G+ PSY WRS+  G E++ +G RWR+GNGE++ ++   W+P                        D     W
Subjt:  IVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIP------------------------DDTCLEW

Query:  NEELLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGY--RLGQVTLLAQTPFSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTV
         +++++  F P E R+IL+IPL H   ED++IW   + G +++KS Y   +G +  L +   SSS ++ S  W+  W + IP K++IF W++C+  LPT 
Subjt:  NEELLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGY--RLGQVTLLAQTPFSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTV

Query:  DNLSVRGIDVLNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQS----VQAN-SMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFR--GW
         NL  +G+++ +VC  CG   ES +H+F +C+  + V     W   L +    V  N  ++++   + D    +  E   VV W +WC RN+  F     
Subjt:  DNLSVRGIDVLNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQS----VQAN-SMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFR--GW

Query:  VPSVGLVDWTVNYLAVFRGASRTYCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGM
        VP   +  + + Y+  F+ AS TYC+ +   P+S  KW     G +K+NVD A  E    +  GV++RD  G V  +         + +  E L +  G+
Subjt:  VPSVGLVDWTVNYLAVFRGASRTYCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGM

Query:  RLVVEMDLVLVILEIDSMRVYS
         L  E  L  +I+E D++ V S
Subjt:  RLVVEMDLVLVILEIDSMRVYS

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]4.9e-6232.73Show/hide
Query:  IVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIPDDTCL----------------------EWNE
        I+Q+P+S ++ VLK RYF    F++AG GS+PS++WRS++WG+++L KG RWRIGNG+ V VYG+NWIP  T                        +W E
Subjt:  IVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIPDDTCL----------------------EWNE

Query:  ELLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGYRLGQVTLLAQTPFSSSCETL-SSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDNL
        +L+  HF P +  +I+ IPL     ED++IWH +K G Y++KSGY   QV +  + P   SC     + W+  WK+ IP K+KIF WR   + LPT +NL
Subjt:  ELLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGYRLGQVTLLAQTPFSSSCETL-SSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDNL

Query:  SVRGIDVLNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFRGWVPS----VGL
          + +    +C  C  H E+  H   +C   R++   S     L+ V    ++ +L+    +    +  E+  +LW +W  RN+  F G   +    V  
Subjt:  SVRGIDVLNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFRGWVPS----VGL

Query:  VDWTVNYLAVFRGASRTYCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEM
         +  V      R     Y    +G      +W P   GW KVNVDAA   +   AG GVVVRD  G    +A  S    G+  +AE   +  G+++  + 
Subjt:  VDWTVNYLAVFRGASRTYCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEM

Query:  DLVLVILEIDSMRVYSLLQEPAMVDLSELDVLVSEARKEV
         +   I E DS+ V  L+ + +   L+E+  L+S+ ++ +
Subjt:  DLVLVILEIDSMRVYSLLQEPAMVDLSELDVLVSEARKEV

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]2.5e-5831.18Show/hide
Query:  IVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIPDDTCL----------------------EWNE
        ++QYP S +S VL+ RYF + +FL A AG+  SYIWRS++WG++++ KG+RWRIGNG+K++++  NW+P                           +W+E
Subjt:  IVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIPDDTCL----------------------EWNE

Query:  ELLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGYRLGQVTLLAQTPFSSSC-ETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDNL
          L+ HF   +   IL IPL    AED+V+WH +K G Y++KSGY   Q+ L ++ P S+SC E    +W   W + +P K+KIF WR     LP+ +NL
Subjt:  ELLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGYRLGQVTLLAQTPFSSSC-ETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDNL

Query:  SVRGIDVLNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFRG--WVPSVGLVD
          R +     C  C    E+  H   +CK  R++ + S +        +  + + L+ +  ++  +  E +V + W  W  RN+  F G    P +    
Subjt:  SVRGIDVLNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFRG--WVPSVGLVD

Query:  WTVNYLAVFRGASRTYCEGIR-GVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEMD
           + L  F+   +     I   +     +W P  +  +KVNVDAA+      AG G V+RD  G+++ +    +   G++ LAE   V+ G++L    D
Subjt:  WTVNYLAVFRGASRTYCEGIR-GVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEMD

Query:  LVLVILEIDSMRVYSLL
        +  +I+E D + V  L+
Subjt:  LVLVILEIDSMRVYSLL

XP_024956542.1 uncharacterized protein LOC112498908 [Citrus sinensis]1.5e-5533.81Show/hide
Query:  IVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIPDDTCLE----------------------WNE
        I Q P S ++ VL+ RYF S NFL+A  GS PSYIWRS++WG++++  G RWRIGNG+ V ++ +NWIP     +                      W+E
Subjt:  IVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIPDDTCLE----------------------WNE

Query:  ELLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGYRLGQVTLLAQTPFSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDNLS
        EL+  HF   +   I  IPL     ED++IWH  K G YT+KSGY+          P  SS E+  + W   W + +P KI+IF WR     LP+ +NL 
Subjt:  ELLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGYRLGQVTLLAQTPFSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDNLS

Query:  VRGIDVLNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFRGWVPSVGLVDWTV
         R I     C  C    E+  H    CK  ++V   S + + +Q+     +L+LL GVK     A  +   V+LW  W  RNQ  F+G   +   V    
Subjt:  VRGIDVLNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFRGWVPSVGLVDWTV

Query:  NYLAVFRGASRTY--CEGIRGVPRSAVK--WFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEMD
           AV     R     +   G  +   +  W P +EG+ K+N DAA   + + AG G V+RDE G+V  +A       G+   AE   +  G+++  +  
Subjt:  NYLAVFRGASRTY--CEGIRGVPRSAVK--WFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEMD

Query:  LVLVILEIDSMRVYSLL
        +  VI+E DS  V SL+
Subjt:  LVLVILEIDSMRVYSLL

TrEMBL top hitse value%identityAlignment
A0A1S8AC01 Ribonuclease H-like superfamily protein2.6e-5331.4Show/hide
Query:  IVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIPD----------------------DTCLEWNE
        ++Q+P S  + VL+ +YF   +FL+A  GS PS+IWRS+IWG++++  G RWRIG G+KV +Y ++WIP                       D   +W+E
Subjt:  IVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIPD----------------------DTCLEWNE

Query:  ELLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGYRLGQVTLLAQTP-FSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDNL
          +  HF   +   I+++PL     +D+++WH +K G Y++KSGY   QV L  + P   SS    ++ W+  W + +P K++IF WR     LP+ +NL
Subjt:  ELLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGYRLGQVTLLAQTP-FSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDNL

Query:  SVRGIDVLNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFRGWVPSVGLVDWT
          R +    +C  C    ES  H    CK  R+V   +++   LQ      +L+LL+G       A  E LV + W +W  RNQ  F+       +V   
Subjt:  SVRGIDVLNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFRGWVPSVGLVDWT

Query:  VNYLAVFRGASRTYCEGIRGVPRSAVK----WFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEM
            A+ +   RT+      + + A K    W P   GW+K+NVDAA   D   +G GVV+R+  G V+ +A       G+    E   +  G+++    
Subjt:  VNYLAVFRGASRTYCEGIRGVPRSAVK----WFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEM

Query:  DLVLVILEIDSMRV
         L  +I+E DS  V
Subjt:  DLVLVILEIDSMRV

A0A1S8ACU2 Ribonuclease H-like superfamily protein2.4e-5429.93Show/hide
Query:  IVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIP---------------DDTCLE-------WNE
        I++YP S ++ +L+ +YF   +FL A  GS+PS++WRS+IWG++++  G+RWRIG G++V +Y S+WIP               D T  E       W E
Subjt:  IVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIP---------------DDTCLE-------WNE

Query:  ELLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGYRLGQVTLLAQTPFSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDNLS
         L+Q HF+  +   I  I L      D+++WH +K G Y++KSGY++         P SSS       W   W + +P KIKIF W+     LPT +NL 
Subjt:  ELLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGYRLGQVTLLAQTPFSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDNLS

Query:  VRGIDVLNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKF--RGWVPSVGLVDW
         R +    +C  C    E   H    CK  +++   + +   +Q +    +L++L+ + ++    +   ++ + W  W  RN   F  +   P + +   
Subjt:  VRGIDVLNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKF--RGWVPSVGLVDW

Query:  TVNYLAVFRGASRTYCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEMDLV
             +  R          + +P    KW P  +G +K NVDAA  ++ +Q G GVV+RD+ G ++++A     + G+   AE   V  G+++V+E  L 
Subjt:  TVNYLAVFRGASRTYCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEMDLV

Query:  LVILEIDSMRV
         +ILE D   V
Subjt:  LVILEIDSMRV

A0A6J1DAR4 uncharacterized protein LOC1110189549.9e-8537.59Show/hide
Query:  IVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIPDDTCLE-----------------------WN
        I+ +P S LS VLKGRYF   +F++A     PSYIWRS++WG++LL KG+RWRIGNG+ V +YG NW+P+   L+                       W 
Subjt:  IVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIPDDTCLE-----------------------WN

Query:  EELLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGYRLGQV-TLLAQTPFSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDN
         ++++  F+P E + IL+IP+   + ED++IW+ EK G+Y+++SGY++  +     Q P SSS E +  WW G WKM IPNKIK+F WRLCL+RLPT  N
Subjt:  EELLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGYRLGQV-TLLAQTPFSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDN

Query:  LSVRGIDVLNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFRGWVPSV-----
        LS RG+++ N C  CG +GE  +HLFW CKF   + + S++  L       S   +LR   + +  A FEEL VV+W +W  RN + F     +V     
Subjt:  LSVRGIDVLNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFRGWVPSV-----

Query:  GLVDWTVNYLAVFRGASRTYCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVV
         LV+W   Y   FR A      G R    + + W P +EG YK+N DA++      AG G+++ ++ G+VM +AT   +++ + D+AE +  V+G++L  
Subjt:  GLVDWTVNYLAVFRGASRTYCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVV

Query:  EMDLVLVILEIDSMRVYSLLQEPAMVDLSELDVLVSEAR
        E+ +                  PA+ DLSE   +V +A+
Subjt:  EMDLVLVILEIDSMRVYSLLQEPAMVDLSELDVLVSEAR

A0A803PEK8 Uncharacterized protein1.4e-5432.69Show/hide
Query:  VQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNW--------------IPDDTCL--------EWNEE
        +++P +  S VLK  YFP+ + L+A +G+  S++WRSL+WGK+++  G RWR+GNGE V V    W              +P++  +         W+E 
Subjt:  VQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNW--------------IPDDTCL--------EWNEE

Query:  LLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGYRLGQVTLLAQTPFSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDNLSV
         ++  F+  +   IL+ P      EDK++WH  K G YT+KSGY++   + LA   + S  +    WWK  W ++IP KIK F W+L    +PT  NL+ 
Subjt:  LLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGYRLGQVTLLAQTPFSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDNLSV

Query:  RGIDVLNVCVHCGWH-GESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFRGWVPSVG-LVDWT
        RG+ + N+C  C  H  E+  H  W+CK  +E+   S  +  ++ ++   +L+ L  +    D  +FE  +V+ W +W  RN     G  P  G +VDW 
Subjt:  RGIDVLNVCVHCGWH-GESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFRGWVPSVG-LVDWT

Query:  VNYLAVFRGASRTYCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRV
          +L  F+G        +R   R   KW   + G  K+NVDA        +G G V RD  GRV
Subjt:  VNYLAVFRGASRTYCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRV

A0A803QQT2 Uncharacterized protein7.6e-5332.54Show/hide
Query:  VQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIP--------DDTCL--------------EWNEE
        +++P    S VLK  YFP    L+AG G+  S++WRSL+WGK+L+ KG RWR+GNGE V V    W+P        D   L              +W+E 
Subjt:  VQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIP--------DDTCL--------------EWNEE

Query:  LLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGYRLGQVTLLAQTPFSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDNLSV
         ++  F+P +V  IL IP      EDK++WH  K G Y++KSGYR+       Q    S+  ++  WWK  W+++IP K+K F W++    LP   NL+ 
Subjt:  LLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGYRLGQVTLLAQTPFSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDNLSV

Query:  RGIDVLNVCVHCGWH-GESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFRGWVPS-VGLVDWT
        RGI    VC  C  H  ES  H  W+CK  +     S     L+ +     L +L  +  + D  K E  ++V W +W  RN     G+ P    +++W 
Subjt:  RGIDVLNVCVHCGWH-GESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFRGWVPS-VGLVDWT

Query:  VNYLAVFRGASRTYCEGIRGVPRSA--VKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVM-LSATVSHDHVGNSDLAEGLTVVDGMRLVVEMD
         N+LA FRG +     G     RS+   +W P       +NVDA   +    +G G VVRD  G V+  +ATV    +    L E + +  G+++ ++  
Subjt:  VNYLAVFRGASRTYCEGIRGVPRSA--VKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVM-LSATVSHDHVGNSDLAEGLTVVDGMRLVVEMD

Query:  LVLVILEIDSMRVYSLLQ
        L    +E D ++   L+Q
Subjt:  LVLVILEIDSMRVYSLLQ

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657502.0e-1321.43Show/hide
Query:  SYIWRSLIWG-KELLDKGIRWRIGNGEKVSVYGSNWIPDDTCLE------------------------WNEELLQHHFSPCEVRSILTIPLRHIS-AEDK
        S  WRS+  G ++++  G+ W  G+G+++  +   W+     LE                        W+   +  + +      +  + L  ++ A D+
Subjt:  SYIWRSLIWG-KELLDKGIRWRIGNGEKVSVYGSNWIPDDTCLE------------------------WNEELLQHHFSPCEVRSILTIPLRHIS-AEDK

Query:  VIWHSEKCGIYTIKSGYRLGQVTLLAQTPFSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDNLSVRGIDVLNVCVHCGWHGESCMHLFWQCK
        + W   + G ++++S Y +  V  + +         ++S++   WK+R+P ++K F W +  + + T +    R +   NVC  C    ES +H+   C 
Subjt:  VIWHSEKCGIYTIKSGYRLGQVTLLAQTPFSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDNLSVRGIDVLNVCVHCGWHGESCMHLFWQCK

Query:  FFREVLMGSEWEVLLQSVQANSMLNLL------RGVKDKVDWAKFEELVVVLWVVW---C---------CRNQQKFRGWVPSVGLVDWTVNYLAVFRGAS
            + +    +   Q   + S+   L      R   + + W+      V++W  W   C         CR++ KF        + +W V    V+R  S
Subjt:  FFREVLMGSEWEVLLQSVQANSMLNLL------RGVKDKVDWAKFEELVVVLWVVW---C---------CRNQQKFRGWVPSVGLVDWTVNYLAVFRGAS

Query:  RTYCEGIRGVPR--SAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEMDLVLVILEIDSMR
             GI   PR    + W     GW KVN D A   +   A AG V+RD  G      +++     ++  AE   V  G+    E  +  V LE+DS  
Subjt:  RTYCEGIRGVPR--SAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEMDLVLVILEIDSMR

Query:  VYSLLQ
        +   L+
Subjt:  VYSLLQ

P93295 Uncharacterized mitochondrial protein AtMg003101.7e-1243.24Show/hide
Query:  IVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIPDDTCL
        I+  P + LS +L+ RYFP  + ++   G+RPSY WRS+I G+ELL +G+   IG+G    V+   WI D+T L
Subjt:  IVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIPDDTCL

Arabidopsis top hitse value%identityAlignment
AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.2e-0437.31Show/hide
Query:  WWKGCW-KMRIPNKIKIFFWRLCLERLPTVDNLSVRGIDVLNVCVHCGWHGESCMHLFWQCKFFREV
        W+K  W K +IP K     W     RL T D +   G     +C+ C  H E+  HLF+ C+F REV
Subjt:  WWKGCW-KMRIPNKIKIFFWRLCLERLPTVDNLSVRGIDVLNVCVHCGWHGESCMHLFWQCKFFREV

AT3G09510.1 Ribonuclease H-like superfamily protein9.6e-2423.21Show/hide
Query:  LKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWI---------PDDTCLE---------------WNEELLQHHFSPC
        +K RYF   + LDA    + SY W SL+ G  LL KG R  IG+G+ + +   N +          ++T  E               W++  +       
Subjt:  LKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWI---------PDDTCLE---------------WNEELLQHHFSPC

Query:  EVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGYRL----GQVTLLAQTPFSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDNLSVRGIDV
        +   I  I L      DK+IW+    G YT++SGY L        + A  P   S +  +      W + I  K+K F WR   + L T + L+ RG+ +
Subjt:  EVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGYRL----GQVTLLAQTPFSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDNLSVRGIDV

Query:  LNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQAN----SMLNLLRGVKDKVDWAKFEELVVV--LWVVWCCRNQQKFRGWVPS-----VGL
           C  C    ES  H  + C F       S+  ++   + +N    ++ N+L  V+D    + F +L+ V  +W +W  RN   F  +  S     +  
Subjt:  LNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQAN----SMLNLLRGVKDKVDWAKFEELVVV--LWVVWCCRNQQKFRGWVPS-----VGL

Query:  VDWTVNYLAVFRGASRTYCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEM
           T ++L   +   +T     R +  + ++W      + K N DA +     +A  G ++R+  G  +   ++   H  N   AE   ++  ++     
Subjt:  VDWTVNYLAVFRGASRTYCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEM

Query:  DLVLVILEIDSMRVYSLL
            V +E D   + +L+
Subjt:  DLVLVILEIDSMRVYSLL

AT3G25270.1 Ribonuclease H-like superfamily protein2.9e-1225.94Show/hide
Query:  WKMRIPNKIKIFFWRLCLERLPTVDNLSVRGIDVLNVCVHCGWHGESCMHLFWQCKFFREV----------------LMGSEWEVLLQSVQANSMLNLLR
        WK++   KIK F W+L    L T DNL  R I     C  C    E+  HLF+ C + ++V                 M ++ E+LL S  AN    L  
Subjt:  WKMRIPNKIKIFFWRLCLERLPTVDNLSVRGIDVLNVCVHCGWHGESCMHLFWQCKFFREV----------------LMGSEWEVLLQSVQANSMLNLLR

Query:  GVKDKVDWAKFEELVVVLWVVWCCRN----QQKFRGWVPSV-----GLVDWTVNYLAVFRGASRTYCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDL
                  F   + +LW +W  RN    QQK   W  ++      + +W      V     + +    +    +  KW      W K N D A+    
Subjt:  GVKDKVDWAKFEELVVVLWVVWCCRN----QQKFRGWVPSV-----GLVDWTVNYLAVFRGASRTYCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDL

Query:  SQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEMDLVLVILEIDSMRVYSLL
          A AG ++RDE G  M S         +S  +E   ++  M+         VI E DS +V  L+
Subjt:  SQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEMDLVLVILEIDSMRVYSLL

AT4G29090.1 Ribonuclease H-like superfamily protein1.7e-3327.48Show/hide
Query:  KTMMELLSIVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIP-----------------------
        K M  +LS    P S ++ V K RYF   + L+A  GSRPS++W+S+   +E+L +G R  +GNGE + ++   W+                        
Subjt:  KTMMELLSIVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIP-----------------------

Query:  --------DDTCLEWNEELLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGY-RLGQVTLLAQTPFSSSCETLSSWWKGCWKMRIPNKIK
                D++  EW +++++  F   E + I  +        D   W     G YT+KSGY  L Q+     +P   S  +L+  ++  WK +   KI+
Subjt:  --------DDTCLEWNEELLQHHFSPCEVRSILTIPLRHISAEDKVIWHSEKCGIYTIKSGY-RLGQVTLLAQTPFSSSCETLSSWWKGCWKMRIPNKIK

Query:  IFFWRLCLERLPTVDNLSVRGIDVLNVCVHCGWHGESCMHLFWQCKFFR--------EVLMGSEWEVLLQSVQANS--MLNLLRGVKDKVDWAKFEELVV
         F W+     LP    L+ R +   + C+ C    E+  HL ++C F R         + +G EW     S+  N   + NL  G      W K  +LV 
Subjt:  IFFWRLCLERLPTVDNLSVRGIDVLNVCVHCGWHGESCMHLFWQCKFFR--------EVLMGSEWEVLLQSVQANS--MLNLLRGVKDKVDWAKFEELVV

Query:  -VLWVVWCCRNQQKFRGWVPSVGLVDWTVNYLAVFRGAS--------RTYCEGIRGVPR----SAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDE
         +LW +W  RN+  FRG            N   V R A         RT  E     P+    S  +W P    W K N DA +  D  + G G V+R+E
Subjt:  -VLWVVWCCRNQQKFRGWVPSVGLVDWTVNYLAVFRGAS--------RTYCEGIRGVPR----SAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDE

Query:  VGRV
         G V
Subjt:  VGRV

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.2e-1343.24Show/hide
Query:  IVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIPDDTCL
        I+  P + LS +L+ RYFP  + ++   G+RPSY WRS+I G+ELL +G+   IG+G    V+   WI D+T L
Subjt:  IVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIPDDTCL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCGGAGAAAGACGATGATGGAGTTGTTATCGATTGTTCAGTATCCTACCTCGTTTCTCTCCTGTGTGTTGAAAGGGCGGTATTTTCCTAGTGGAAACTTCCTGGA
TGCAGGGGCGGGCTCCCGCCCCTCGTATATTTGGAGGAGCCTGATTTGGGGGAAGGAGCTTTTGGATAAGGGTATTCGCTGGAGGATTGGGAATGGGGAGAAAGTCAGTG
TATATGGATCTAACTGGATTCCAGATGATACCTGCCTTGAGTGGAATGAGGAACTCCTTCAGCATCACTTTAGTCCTTGCGAGGTACGCTCTATCCTTACTATCCCCTTG
CGGCATATATCGGCTGAGGATAAAGTCATATGGCATTCTGAGAAGTGTGGGATCTATACGATTAAGAGTGGGTACCGGCTTGGCCAGGTGACTTTGCTTGCCCAAACCCC
ATTTTCGTCTTCGTGTGAGACGTTGTCCAGTTGGTGGAAGGGGTGTTGGAAAATGAGGATCCCAAACAAAATTAAGATTTTCTTTTGGAGGCTTTGCTTGGAGCGACTTC
CTACTGTTGACAACTTGAGTGTCAGGGGCATTGATGTTTTGAATGTGTGTGTGCATTGTGGTTGGCATGGGGAGTCATGCATGCATTTGTTTTGGCAGTGCAAATTTTTT
CGTGAAGTATTGATGGGATCTGAGTGGGAGGTTCTGCTGCAGAGTGTCCAGGCGAACTCTATGCTTAATCTGCTTAGGGGTGTGAAGGACAAGGTCGATTGGGCTAAGTT
TGAAGAGCTTGTTGTGGTGTTGTGGGTTGTGTGGTGTTGTCGAAACCAACAGAAGTTTAGAGGGTGGGTTCCTTCAGTAGGGCTTGTGGATTGGACGGTGAATTATCTTG
CTGTTTTTCGAGGGGCCTCTCGGACCTATTGTGAGGGGATTAGAGGAGTGCCTCGGAGTGCAGTAAAATGGTTCCCGCTGGAGGAGGGATGGTATAAGGTGAACGTGGAT
GCTGCATATTGTGAGGATCTATCTCAGGCGGGTGCTGGAGTTGTTGTTCGGGATGAGGTAGGGCGAGTCATGCTGTCAGCTACTGTTAGTCATGATCATGTGGGGAATTC
AGATTTGGCAGAGGGTCTGACGGTGGTGGACGGGATGAGGCTTGTGGTGGAGATGGATTTAGTTCTGGTAATCCTTGAGATTGACTCTATGCGGGTTTATTCGTTGCTGC
AAGAGCCTGCGATGGTGGATCTGTCTGAGTTAGATGTGTTGGTTTCTGAGGCTCGAAAGGAGGTGCCTGGGCACATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGCGGAGAAAGACGATGATGGAGTTGTTATCGATTGTTCAGTATCCTACCTCGTTTCTCTCCTGTGTGTTGAAAGGGCGGTATTTTCCTAGTGGAAACTTCCTGGA
TGCAGGGGCGGGCTCCCGCCCCTCGTATATTTGGAGGAGCCTGATTTGGGGGAAGGAGCTTTTGGATAAGGGTATTCGCTGGAGGATTGGGAATGGGGAGAAAGTCAGTG
TATATGGATCTAACTGGATTCCAGATGATACCTGCCTTGAGTGGAATGAGGAACTCCTTCAGCATCACTTTAGTCCTTGCGAGGTACGCTCTATCCTTACTATCCCCTTG
CGGCATATATCGGCTGAGGATAAAGTCATATGGCATTCTGAGAAGTGTGGGATCTATACGATTAAGAGTGGGTACCGGCTTGGCCAGGTGACTTTGCTTGCCCAAACCCC
ATTTTCGTCTTCGTGTGAGACGTTGTCCAGTTGGTGGAAGGGGTGTTGGAAAATGAGGATCCCAAACAAAATTAAGATTTTCTTTTGGAGGCTTTGCTTGGAGCGACTTC
CTACTGTTGACAACTTGAGTGTCAGGGGCATTGATGTTTTGAATGTGTGTGTGCATTGTGGTTGGCATGGGGAGTCATGCATGCATTTGTTTTGGCAGTGCAAATTTTTT
CGTGAAGTATTGATGGGATCTGAGTGGGAGGTTCTGCTGCAGAGTGTCCAGGCGAACTCTATGCTTAATCTGCTTAGGGGTGTGAAGGACAAGGTCGATTGGGCTAAGTT
TGAAGAGCTTGTTGTGGTGTTGTGGGTTGTGTGGTGTTGTCGAAACCAACAGAAGTTTAGAGGGTGGGTTCCTTCAGTAGGGCTTGTGGATTGGACGGTGAATTATCTTG
CTGTTTTTCGAGGGGCCTCTCGGACCTATTGTGAGGGGATTAGAGGAGTGCCTCGGAGTGCAGTAAAATGGTTCCCGCTGGAGGAGGGATGGTATAAGGTGAACGTGGAT
GCTGCATATTGTGAGGATCTATCTCAGGCGGGTGCTGGAGTTGTTGTTCGGGATGAGGTAGGGCGAGTCATGCTGTCAGCTACTGTTAGTCATGATCATGTGGGGAATTC
AGATTTGGCAGAGGGTCTGACGGTGGTGGACGGGATGAGGCTTGTGGTGGAGATGGATTTAGTTCTGGTAATCCTTGAGATTGACTCTATGCGGGTTTATTCGTTGCTGC
AAGAGCCTGCGATGGTGGATCTGTCTGAGTTAGATGTGTTGGTTTCTGAGGCTCGAAAGGAGGTGCCTGGGCACATTTAG
Protein sequenceShow/hide protein sequence
MARRKTMMELLSIVQYPTSFLSCVLKGRYFPSGNFLDAGAGSRPSYIWRSLIWGKELLDKGIRWRIGNGEKVSVYGSNWIPDDTCLEWNEELLQHHFSPCEVRSILTIPL
RHISAEDKVIWHSEKCGIYTIKSGYRLGQVTLLAQTPFSSSCETLSSWWKGCWKMRIPNKIKIFFWRLCLERLPTVDNLSVRGIDVLNVCVHCGWHGESCMHLFWQCKFF
REVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFRGWVPSVGLVDWTVNYLAVFRGASRTYCEGIRGVPRSAVKWFPLEEGWYKVNVD
AAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEMDLVLVILEIDSMRVYSLLQEPAMVDLSELDVLVSEARKEVPGHI