; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022517 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022517
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationscaffold2:4882718..4884860
RNA-Seq ExpressionSpg022517
SyntenySpg022517
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009645 - response to low light intensity stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138171.1 chlorophyll a-b binding protein P4, chloroplastic [Cucumis sativus]2.9e-13996.83Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSGKL R LSVKPV+ASSSSS KVEAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

XP_008453211.1 PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Cucumis melo]6.9e-14197.62Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSGKLHR LSVKPV+ASSSSS KVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

XP_022134700.1 chlorophyll a-b binding protein P4, chloroplastic [Momordica charantia]3.1e-14198.02Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCA+RSRFLSGSS KLHRELSVKPVAA SSSSLKVEAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

XP_023516219.1 chlorophyll a-b binding protein P4, chloroplastic [Cucurbita pepo subsp. pepo]1.7e-13996.83Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFL+GSSGKLHR LSVKPVAASSSSS KVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPL LAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPT EA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTF GN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

XP_038880569.1 chlorophyll a-b binding protein P4, chloroplastic [Benincasa hispida]6.2e-14298.41Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPV+ASSSSS KVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

TrEMBL top hitse value%identityAlignment
A0A0A0LSB4 Chlorophyll a-b binding protein, chloroplastic1.4e-13996.83Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSGKL R LSVKPV+ASSSSS KVEAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

A0A1S3BV45 Chlorophyll a-b binding protein, chloroplastic3.3e-14197.62Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSGKLHR LSVKPV+ASSSSS KVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

A0A5A7UWR2 Chlorophyll a-b binding protein, chloroplastic3.3e-14197.62Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSGKLHR LSVKPV+ASSSSS KVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

A0A6J1BZ19 Chlorophyll a-b binding protein, chloroplastic1.5e-14198.02Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCA+RSRFLSGSS KLHRELSVKPVAA SSSSLKVEAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

A0A6J1JG60 Chlorophyll a-b binding protein, chloroplastic1.8e-13996.43Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAAVFRPCAARSRFL+GSSGKLHR LSVKPVAASSSSS KVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPL LAEDPENL+WFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPT EA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTF GN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

SwissProt top hitse value%identityAlignment
P13869 Chlorophyll a-b binding protein, chloroplastic5.1e-6248.95Show/hide
Query:  AARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFT
        A ++ FL G   ++ + ++     + + S++  +  +  W PG   P +L+GSLPGD GFDPLGL  DPE+L+W  QAELV+ RWAMLG AG+ +PE  T
Subjt:  AARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFT

Query:  KIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APTLEAKEKEIANGRL
        KIG++N P WY AG+ EYF  ++TLFVIE +L  + E RRW DI  PG VN DPIF    L   +VGYPGG+ F+PL +     A   E + KEI NGRL
Subjt:  KIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APTLEAKEKEIANGRL

Query:  AMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF
        AMLA +G   QH  TG GP DNL  H++DP H TI   F
Subjt:  AMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF

P27521 Chlorophyll a-b binding protein 4, chloroplastic1.1e-12585.2Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASS-SSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNG
        MATVTT ASA++FRPC ++ RFL+GSSG+L+R+LS   + +S+ +SS KVEAKKGEWLPGL SP YL GSL GDNGFDPLGLAEDPENL+WFVQAELVNG
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASS-SSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNG

Query:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLE
        RWAMLGVAGMLLPEVFTKIGIIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  EVGYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF
        AKEKE+ANGRLAMLAFLGF+VQHNVTGKGPF+NLLQH+SDPWHNTIVQTF
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF

Q36718 Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)1.4e-8872.02Show/hide
Query:  PVAASSSSSLKVEA---KKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYD-AGKAE
        P A+ S  S + +     KG WLPGL SPAYL+GSL GDNGFDPL LAEDPE+LRWFVQA++VNGRWAMLGVAGML+PEV TK G++NAP+W    GK  
Subjt:  PVAASSSSSLKVEA---KKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYD-AGKAE

Query:  YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNL
        YFASSST   +  +   YVEIRRWQDIKNPGSVNQDPIFK YSLPP+E GYPG +FNPLNFAP LE KEKE+ANGRLAMLAFLGF+VQHNV GKGPF+NL
Subjt:  YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNL

Query:  LQHISDPWHNTIVQTFGG
         QH++DPWHNTI+QT  G
Subjt:  LQHISDPWHNTIVQTFGG

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic5.7e-13088.1Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
        MATVTTQASAA+F PC  +SRFL GSSGKL+R ++ +PV  S S+S KVEAKKGEWLPGL SP YL GSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFT IGIIN P+WY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP  EVGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNLLQHISDPWHNTIVQT GGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic3.5e-6350Show/hide
Query:  TQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGE--WLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAM
        + A AA+  P      FL G   +L ++L+V  V+   +S   V A      W PG   P +L+GSLPGD GFDPLGL+ DP++L+W VQAE+V+ RWAM
Subjt:  TQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGE--WLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAM

Query:  LGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APT
        LG AG+ +PE  TKIGI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   +VGYPGG+ F+PL +     A  
Subjt:  LGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APT

Query:  LEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF
         E + KEI NGRLAMLA +G   QH  TG GP DNL  H++DP H TI   F
Subjt:  LEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 61.6e-5542.86Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSS--GKLHRELSVKPVAASSSSSL--KVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAEL
        + +  T +++ V  P   R    S SS  G+L RE  V   A    SS+   +   +  W PG   P +L+GSLPGD GFDPLGL  DP+ L+WF QAEL
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSS--GKLHRELSVKPVAASSSSSL--KVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAEL

Query:  VNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNF--
        ++ RWAML V G+++PE   ++G I    WYDAG  EYFA S+TLFV + +L  + E RRW D+  PGSV+ +P +     P  +VGYPGG++       
Subjt:  VNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNF--

Query:  ----APTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF
             P +  + KEI NGRLAMLAFLGF  Q   T + P +NL+ H++DP H  +   F
Subjt:  ----APTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF

AT1G45474.1 photosystem I light harvesting complex gene 55.0e-5747.3Show/hide
Query:  SSGKLHRELSVKPVAASSSSSLK---------VEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFT
        + G LH       V     SS+K         V  ++  WLPGL  P YL+G+L GD GFDPLGL EDPE+L+W+VQAELV+ R+AMLGVAG+L  ++  
Subjt:  SSGKLHRELSVKPVAASSSSSLK---------VEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFT

Query:  KIGIINAPQWYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNEVGYPGG-IFNPLNFAPTLEA----KEKEIAN
          GI N P WY+AG  ++ FAS+ TL V++F+L  + E +R+ D  +PGS  ++  F    + +L   E GYPGG + NPL  A  ++     K KEI N
Subjt:  KIGIINAPQWYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNEVGYPGG-IFNPLNFAPTLEA----KEKEIAN

Query:  GRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQT
        GRLAM+A LGF VQ +VT  GP DNL++H+S+PWH TI+QT
Subjt:  GRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQT

AT1G45474.2 photosystem I light harvesting complex gene 55.0e-5747.3Show/hide
Query:  SSGKLHRELSVKPVAASSSSSLK---------VEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFT
        + G LH       V     SS+K         V  ++  WLPGL  P YL+G+L GD GFDPLGL EDPE+L+W+VQAELV+ R+AMLGVAG+L  ++  
Subjt:  SSGKLHRELSVKPVAASSSSSLK---------VEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFT

Query:  KIGIINAPQWYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNEVGYPGG-IFNPLNFAPTLEA----KEKEIAN
          GI N P WY+AG  ++ FAS+ TL V++F+L  + E +R+ D  +PGS  ++  F    + +L   E GYPGG + NPL  A  ++     K KEI N
Subjt:  KIGIINAPQWYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNEVGYPGG-IFNPLNFAPTLEA----KEKEIAN

Query:  GRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQT
        GRLAM+A LGF VQ +VT  GP DNL++H+S+PWH TI+QT
Subjt:  GRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQT

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A47.9e-12785.2Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASS-SSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNG
        MATVTT ASA++FRPC ++ RFL+GSSG+L+R+LS   + +S+ +SS KVEAKKGEWLPGL SP YL GSL GDNGFDPLGLAEDPENL+WFVQAELVNG
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASS-SSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNG

Query:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLE
        RWAMLGVAGMLLPEVFTKIGIIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  EVGYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF
        AKEKE+ANGRLAMLAFLGF+VQHNVTGKGPF+NLLQH+SDPWHNTIVQTF
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF

AT3G61470.1 photosystem I light harvesting complex gene 22.5e-6450Show/hide
Query:  TQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGE--WLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAM
        + A AA+  P      FL G   +L ++L+V  V+   +S   V A      W PG   P +L+GSLPGD GFDPLGL+ DP++L+W VQAE+V+ RWAM
Subjt:  TQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGE--WLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAM

Query:  LGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APT
        LG AG+ +PE  TKIGI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   +VGYPGG+ F+PL +     A  
Subjt:  LGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APT

Query:  LEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF
         E + KEI NGRLAMLA +G   QH  TG GP DNL  H++DP H TI   F
Subjt:  LEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGTCACTACTCAAGCTTCCGCCGCCGTATTCCGGCCATGCGCCGCCCGATCGAGATTCCTTTCTGGGTCTTCCGGTAAACTCCACCGTGAGCTCTCGGTTAA
ACCCGTGGCTGCCTCGTCGTCTTCATCTCTCAAGGTCGAAGCCAAGAAGGGAGAGTGGTTGCCCGGTCTGCCATCTCCGGCATACTTAAATGGAAGTCTTCCGGGCGACA
ACGGATTCGACCCACTGGGACTGGCGGAGGACCCAGAGAACTTGAGGTGGTTCGTGCAGGCGGAACTCGTCAACGGGCGGTGGGCGATGTTGGGCGTCGCCGGAATGCTT
CTGCCGGAAGTTTTCACGAAGATCGGAATCATCAACGCCCCACAATGGTACGACGCCGGAAAGGCAGAGTACTTCGCATCGTCTTCAACCCTGTTCGTGATCGAGTTCAT
CCTCTTCCATTACGTCGAAATCAGAAGATGGCAGGACATTAAAAACCCCGGCAGCGTGAACCAAGACCCCATTTTCAAGCAATACAGTTTGCCTCCAAACGAAGTCGGCT
ACCCTGGTGGCATTTTCAATCCCCTGAATTTCGCCCCGACTCTTGAGGCCAAAGAGAAGGAAATCGCCAATGGGAGACTTGCGATGTTGGCGTTTTTGGGGTTCATTGTG
CAACACAATGTGACAGGGAAGGGGCCGTTCGACAACCTGTTGCAGCACATTTCTGACCCATGGCACAACACCATTGTCCAGACGTTCGGTGGCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCGTCACTACTCAAGCTTCCGCCGCCGTATTCCGGCCATGCGCCGCCCGATCGAGATTCCTTTCTGGGTCTTCCGGTAAACTCCACCGTGAGCTCTCGGTTAA
ACCCGTGGCTGCCTCGTCGTCTTCATCTCTCAAGGTCGAAGCCAAGAAGGGAGAGTGGTTGCCCGGTCTGCCATCTCCGGCATACTTAAATGGAAGTCTTCCGGGCGACA
ACGGATTCGACCCACTGGGACTGGCGGAGGACCCAGAGAACTTGAGGTGGTTCGTGCAGGCGGAACTCGTCAACGGGCGGTGGGCGATGTTGGGCGTCGCCGGAATGCTT
CTGCCGGAAGTTTTCACGAAGATCGGAATCATCAACGCCCCACAATGGTACGACGCCGGAAAGGCAGAGTACTTCGCATCGTCTTCAACCCTGTTCGTGATCGAGTTCAT
CCTCTTCCATTACGTCGAAATCAGAAGATGGCAGGACATTAAAAACCCCGGCAGCGTGAACCAAGACCCCATTTTCAAGCAATACAGTTTGCCTCCAAACGAAGTCGGCT
ACCCTGGTGGCATTTTCAATCCCCTGAATTTCGCCCCGACTCTTGAGGCCAAAGAGAAGGAAATCGCCAATGGGAGACTTGCGATGTTGGCGTTTTTGGGGTTCATTGTG
CAACACAATGTGACAGGGAAGGGGCCGTTCGACAACCTGTTGCAGCACATTTCTGACCCATGGCACAACACCATTGTCCAGACGTTCGGTGGCAACTGA
Protein sequenceShow/hide protein sequence
MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGML
LPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIV
QHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN