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Spg022528 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022528
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionWD repeat containing protein
Genome locationscaffold2:8364606..8366844
RNA-Seq ExpressionSpg022528
SyntenySpg022528
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588036.1 hypothetical protein SDJN03_16601, partial [Cucurbita argyrosperma subsp. sororia]6.5e-4781.1Show/hide
Query:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE
        MADPR  L S SSPPSLPPND LPRRFKV+WRVLLISNFALSAY+FASARKKDLGQMEND+ EKD GQ ENDG+EK SDSE++ EIPSTFMVDTTGIVTE
Subjt:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE

Query:  NISEDQKQEPFQWMFHGWREKIGLSKK
        NISEDQ Q+PF W+  GWREK G SKK
Subjt:  NISEDQKQEPFQWMFHGWREKIGLSKK

XP_004135711.1 uncharacterized protein LOC101210247 isoform X1 [Cucumis sativus]1.0e-3668.5Show/hide
Query:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE
        M DPR PLPS SS   LPPNDSLP+RFKV+WRVLLISNFALSAY+FASARK+   Q+ENDQ            VEKQSDSE+I EIPST MVDTTGIVTE
Subjt:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE

Query:  NISEDQKQEPFQWMFHGWREKIGLSKK
        N+ EDQ+QEP Q +  GWREK+G S+K
Subjt:  NISEDQKQEPFQWMFHGWREKIGLSKK

XP_022926648.1 uncharacterized protein LOC111433716 [Cucurbita moschata]3.6e-4579.53Show/hide
Query:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE
        MADPR  L S SSPPSL PND LPRRFKV+WRVLLISNFALSAY+FASARKKDLGQMEN++ EKD GQ ENDG+EK SDSE++ EIPSTFMVDTTGIVTE
Subjt:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE

Query:  NISEDQKQEPFQWMFHGWREKIGLSKK
        NISEDQ Q+PF W+  GWREK G SKK
Subjt:  NISEDQKQEPFQWMFHGWREKIGLSKK

XP_022968528.1 uncharacterized protein LOC111467730 isoform X1 [Cucurbita maxima]9.4e-4679.53Show/hide
Query:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE
        MADPR  L S SSPPSLPPND LPRRFKV+WRVLLISNFALSAY+FASARKKDLGQME+D+ EKD GQ ENDG+EK SDSE++ EIPSTFMVDTTGIVTE
Subjt:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE

Query:  NISEDQKQEPFQWMFHGWREKIGLSKK
        NI EDQ Q+PF W+  GWREK G SKK
Subjt:  NISEDQKQEPFQWMFHGWREKIGLSKK

XP_023530326.1 uncharacterized protein LOC111792930 [Cucurbita pepo subsp. pepo]3.2e-4680.31Show/hide
Query:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE
        MADPR  L S SSPPSLPPND LPRRFKV+WRVLLISNFALSAY+FASARKKDLGQMEND+ EKD GQ ENDG+EK SDSE++ EIPST MVDTTGIVTE
Subjt:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE

Query:  NISEDQKQEPFQWMFHGWREKIGLSKK
        NISEDQ Q+PF W+  GWREK G SKK
Subjt:  NISEDQKQEPFQWMFHGWREKIGLSKK

TrEMBL top hitse value%identityAlignment
A0A0A0M1X9 Uncharacterized protein5.1e-3768.5Show/hide
Query:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE
        M DPR PLPS SS   LPPNDSLP+RFKV+WRVLLISNFALSAY+FASARK+   Q+ENDQ            VEKQSDSE+I EIPST MVDTTGIVTE
Subjt:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE

Query:  NISEDQKQEPFQWMFHGWREKIGLSKK
        N+ EDQ+QEP Q +  GWREK+G S+K
Subjt:  NISEDQKQEPFQWMFHGWREKIGLSKK

A0A1S3BR82 uncharacterized protein LOC1034923201.1e-3465.35Show/hide
Query:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE
        M   R PLPS SS   LPPNDSLP+RFKV+WR+LLISNFALSAY+FASARK+   ++ENDQ            VEKQSDSE+I EIPST MVDTTGIVTE
Subjt:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE

Query:  NISEDQKQEPFQWMFHGWREKIGLSKK
        N+ EDQ+QEP Q +  GWREK+G S+K
Subjt:  NISEDQKQEPFQWMFHGWREKIGLSKK

A0A6J1D315 uncharacterized protein LOC1110165448.3e-3268.97Show/hide
Query:  MADPRPPLPSPSS-PPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVT
        M DPR PLPS SS PP LPPND LPRRFKVIWRVLLISNFAL+AY+FA+ARKKDLG+ME D             VEK SD EV+  IPST MVDTT I  
Subjt:  MADPRPPLPSPSS-PPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVT

Query:  ENISEDQKQEPFQWMF
        ENISED ++EPFQWMF
Subjt:  ENISEDQKQEPFQWMF

A0A6J1EIP0 uncharacterized protein LOC1114337161.7e-4579.53Show/hide
Query:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE
        MADPR  L S SSPPSL PND LPRRFKV+WRVLLISNFALSAY+FASARKKDLGQMEN++ EKD GQ ENDG+EK SDSE++ EIPSTFMVDTTGIVTE
Subjt:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE

Query:  NISEDQKQEPFQWMFHGWREKIGLSKK
        NISEDQ Q+PF W+  GWREK G SKK
Subjt:  NISEDQKQEPFQWMFHGWREKIGLSKK

A0A6J1HYA0 uncharacterized protein LOC111467730 isoform X14.6e-4679.53Show/hide
Query:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE
        MADPR  L S SSPPSLPPND LPRRFKV+WRVLLISNFALSAY+FASARKKDLGQME+D+ EKD GQ ENDG+EK SDSE++ EIPSTFMVDTTGIVTE
Subjt:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE

Query:  NISEDQKQEPFQWMFHGWREKIGLSKK
        NI EDQ Q+PF W+  GWREK G SKK
Subjt:  NISEDQKQEPFQWMFHGWREKIGLSKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55160.1 unknown protein8.3e-0834.68Show/hide
Query:  SPLSMADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTG
        SP + A     +   S PP  PP +S  RR+K +W +LL  N A+  YLF   +KKDL  +  +   K S       VEK   S V+AE P         
Subjt:  SPLSMADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTG

Query:  IVTENISEDQKQEPFQWMFHGWRE
           E I E Q++E F+WM    R+
Subjt:  IVTENISEDQKQEPFQWMFHGWRE

AT1G55160.2 unknown protein1.3e-0836.7Show/hide
Query:  SSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPF
        S PP  PP +S  RR+K +W +LL  N A+  YLF   +KKDL  +  +   K S       VEK   S V+AE P            E I E Q++E F
Subjt:  SSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPF

Query:  QWMFHGWRE
        +WM    R+
Subjt:  QWMFHGWRE

AT1G55160.3 unknown protein9.5e-0428.86Show/hide
Query:  SPLSMADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFAL-------------------------SAYLFASARKKDLGQMENDQVEKDSGQPEN
        SP + A     +   S PP  PP +S  RR+K +W +LL  N A+                          +YLF   +KKDL  +  +   K S     
Subjt:  SPLSMADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFAL-------------------------SAYLFASARKKDLGQMENDQVEKDSGQPEN

Query:  DGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPFQWMFHGWRE
          VEK   S V+AE P            E I E Q++E F+WM    R+
Subjt:  DGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPFQWMFHGWRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATAGTCATAGAATTAGAATTTTAGTCCCAGGGGACGTTGCTTGGCGCGCACACAAGAACACGCAAAAAGACCGAGTCAACGCTGCCATCGCCAAGCACTCAACTTCGCC
ACTTTCAATGGCGGACCCACGACCGCCATTGCCATCTCCATCTTCGCCGCCGTCTTTACCTCCCAATGATTCGCTACCCAGACGCTTCAAGGTCATCTGGCGTGTTCTAT
TGATCTCCAACTTCGCCCTTTCAGCCTACCTGTTTGCAAGTGCAAGGAAGAAAGATTTGGGTCAAATGGAGAATGATCAAGTAGAGAAAGATTCGGGTCAACCGGAAAAT
GATGGAGTAGAAAAACAAAGTGACAGTGAAGTTATTGCGGAAATCCCCTCAACATTTATGGTGGATACCACTGGCATAGTTACTGAGAACATCTCTGAAGATCAGAAGCA
AGAACCATTCCAGTGGATGTTTCATGGTTGGAGAGAAAAGATAGGTTTGAGTAAAAAATGA
mRNA sequenceShow/hide mRNA sequence
CATAGTCATAGAATTAGAATTTTAGTCCCAGGGGACGTTGCTTGGCGCGCACACAAGAACACGCAAAAAGACCGAGTCAACGCTGCCATCGCCAAGCACTCAACTTCGCC
ACTTTCAATGGCGGACCCACGACCGCCATTGCCATCTCCATCTTCGCCGCCGTCTTTACCTCCCAATGATTCGCTACCCAGACGCTTCAAGGTCATCTGGCGTGTTCTAT
TGATCTCCAACTTCGCCCTTTCAGCCTACCTGTTTGCAAGTGCAAGGAAGAAAGATTTGGGTCAAATGGAGAATGATCAAGTAGAGAAAGATTCGGGTCAACCGGAAAAT
GATGGAGTAGAAAAACAAAGTGACAGTGAAGTTATTGCGGAAATCCCCTCAACATTTATGGTGGATACCACTGGCATAGTTACTGAGAACATCTCTGAAGATCAGAAGCA
AGAACCATTCCAGTGGATGTTTCATGGTTGGAGAGAAAAGATAGGTTTGAGTAAAAAATGA
Protein sequenceShow/hide protein sequence
HSHRIRILVPGDVAWRAHKNTQKDRVNAAIAKHSTSPLSMADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPEN
DGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPFQWMFHGWREKIGLSKK