; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022582 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022582
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionHIG1 domain-containing protein
Genome locationscaffold2:5471166..5473556
RNA-Seq ExpressionSpg022582
SyntenySpg022582
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007667 - Hypoxia induced protein, domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO78412.1 hypothetical protein COLO4_24770 [Corchorus olitorius]1.6e-3086.25Show/hide
Query:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ
        M A EP L+EL EGKKRVRNPLVP+GAL+TAGVLTAGLISFRQGNS LGQ+LMR RVVVQGATVALMVGTAYYYGENPW+
Subjt:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ

OMO81563.1 hypothetical protein CCACVL1_12363 [Corchorus capsularis]3.2e-3187.5Show/hide
Query:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ
        M A EPNL+EL EGKKRVRNPLVP+GAL+TAGVLTAGLISFRQGNS LGQ+LMR RVVVQGATVALMVGTAYYYGENPW+
Subjt:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ

XP_021592376.1 RING-H2 finger protein ATL48-like [Manihot esculenta]3.2e-3184.15Show/hide
Query:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQRS
        M  TEPNL++ FE KKRVRNPLVP+GAL+TAGVLTAGLISFRQGNS LGQ+LMR RVVVQGATVALMVGTAYYYGENPW++S
Subjt:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQRS

XP_022727172.1 RING-H2 finger protein ATL48-like [Durio zibethinus]1.2e-3087.5Show/hide
Query:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ
        M A EP+L+EL E KKRVRNPLVP+GALITAGVLTAGLISFRQGNS LGQMLMR RVVVQGATVALMVGTAYYYGENPW+
Subjt:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ

XP_042948360.1 RING-H2 finger protein ATL48-like [Carya illinoinensis]1.2e-3085Show/hide
Query:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ
        M  TEPNL++ FE KKRVRNPLVPIGAL+TAGVLTAGLISF+QGNSHLGQMLMR RVV QGATVALMVGTAYYYG+NPW+
Subjt:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ

TrEMBL top hitse value%identityAlignment
A0A1R3I733 HIG1 domain-containing protein7.8e-3186.25Show/hide
Query:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ
        M A EP L+EL EGKKRVRNPLVP+GAL+TAGVLTAGLISFRQGNS LGQ+LMR RVVVQGATVALMVGTAYYYGENPW+
Subjt:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ

A0A1R3IG67 HIG1 domain-containing protein1.6e-3187.5Show/hide
Query:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ
        M A EPNL+EL EGKKRVRNPLVP+GAL+TAGVLTAGLISFRQGNS LGQ+LMR RVVVQGATVALMVGTAYYYGENPW+
Subjt:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ

A0A2C9UJH6 HIG1 domain-containing protein1.6e-3184.15Show/hide
Query:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQRS
        M  TEPNL++ FE KKRVRNPLVP+GAL+TAGVLTAGLISFRQGNS LGQ+LMR RVVVQGATVALMVGTAYYYGENPW++S
Subjt:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQRS

A0A2P2KAW7 HIG1 domain-containing protein6.0e-3182.93Show/hide
Query:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQRS
        M A EPNL++LFE KKRVRNPLVP+GAL+TAGVLTAGLISFRQGNS LGQ+LMR RVVVQGATVALMVGTA+YYG+NPW++S
Subjt:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQRS

A0A6P5XHD4 RING-H2 finger protein ATL48-like6.0e-3187.5Show/hide
Query:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ
        M A EP+L+EL E KKRVRNPLVP+GALITAGVLTAGLISFRQGNS LGQMLMR RVVVQGATVALMVGTAYYYGENPW+
Subjt:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQ

SwissProt top hitse value%identityAlignment
Q4VC39 Putative HIG1 domain family member 2B9.9e-0746.55Show/hide
Query:  KKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATV-ALMVGTA
        +K   NP+VPIG L TA VLT GL  F QGNS   +++M  ++  QG T+ A+++G A
Subjt:  KKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATV-ALMVGTA

Q6CBQ8 Respiratory supercomplex factor 1, mitochondrial7.5e-0742.62Show/hide
Query:  PLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQR
        PLVP+G L T G L     + R GN      +   RV  QG TVA ++G A YYG++P Q+
Subjt:  PLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQR

Q7X843 RING-H2 finger protein ATL484.4e-3176.54Show/hide
Query:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQR
        M + EP++++LF+ KKRVRNPLVP+GAL+TAGVLTAGLISFR+GNS LGQ+LMR RVVVQGATVALMVGT YYYG+NPW++
Subjt:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQR

Q9BW72 HIG1 domain family member 2A, mitochondrial4.0e-0851.72Show/hide
Query:  KKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATV-ALMVGTA
        +K   NP+VPIG L TA  LT GL SF +GNS   Q++MR R+  QG TV A+++G A
Subjt:  KKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATV-ALMVGTA

Q9CQJ1 HIG1 domain family member 2A1.5e-0750Show/hide
Query:  KKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGAT-VALMVGTA
        +K   NP+VPIG L TA  LT GL  F +G SH  Q++MR R+  QG T VA+++G A
Subjt:  KKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGAT-VALMVGTA

Arabidopsis top hitse value%identityAlignment
AT3G48030.1 hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein3.1e-3276.54Show/hide
Query:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQR
        M + EP++++LF+ KKRVRNPLVP+GAL+TAGVLTAGLISFR+GNS LGQ+LMR RVVVQGATVALMVGT YYYG+NPW++
Subjt:  MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCGACCGAACCCAATTTGGACGAATTATTCGAAGGGAAGAAGCGCGTTAGGAATCCTTTGGTTCCTATAGGTGCACTTATCACAGCTGGAGTTCTTACAGCAGG
GTTGATTAGTTTCCGGCAAGGCAACTCTCACTTGGGACAGATGCTAATGAGAGGTCGGGTGGTCGTCCAAGGTGCGACCGTGGCTCTTATGGTTGGCACTGCCTATTACT
ATGGGGAGAATCCATGGCAGCGCAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGCGACCGAACCCAATTTGGACGAATTATTCGAAGGGAAGAAGCGCGTTAGGAATCCTTTGGTTCCTATAGGTGCACTTATCACAGCTGGAGTTCTTACAGCAGG
GTTGATTAGTTTCCGGCAAGGCAACTCTCACTTGGGACAGATGCTAATGAGAGGTCGGGTGGTCGTCCAAGGTGCGACCGTGGCTCTTATGGTTGGCACTGCCTATTACT
ATGGGGAGAATCCATGGCAGCGCAGTTAG
Protein sequenceShow/hide protein sequence
MVATEPNLDELFEGKKRVRNPLVPIGALITAGVLTAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWQRS