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Spg022649 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022649
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDynein light chain
Genome locationscaffold2:7462332..7463188
RNA-Seq ExpressionSpg022649
SyntenySpg022649
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150050.1 dynein light chain 1, cytoplasmic [Cucumis sativus]6.9e-3890.22Show/hide
Query:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAAS
        MLEGKATVKETDMSEKMQ+HAMASAS ALDLFDVSD LSLASHIKKDFD +YGSGWQCVVGSNFGCFFTHS G+FIYFSLETLNFLIFK+ S
Subjt:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAAS

XP_008462685.1 PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo]5.3e-3890.22Show/hide
Query:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAAS
        MLEGKATVKETDMSEKMQ+HAMASASHALDLFDVSD LSLAS+IKKDFD +YGSGWQCVVGSNFGCFFTHS G+FIYFSLETLNFLIFK+ S
Subjt:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAAS

XP_014508216.1 dynein light chain 1, cytoplasmic [Vigna radiata var. radiata]4.9e-3680.65Show/hide
Query:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAASN
        MLEGKA VKETDMS KMQIHAMA+ASHALDL+DVSDC+S+A+HIKK+FD  YG+GWQCVVGSNFGC+FTHS G+FIYF+LETLNFLIFK +S+
Subjt:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAASN

XP_022933771.1 dynein light chain 1, cytoplasmic-like [Cucurbita moschata]4.6e-4294.62Show/hide
Query:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAASN
        MLEGKATVK+TDMSEKMQIHA ASASHALDLFDVSDCLSLA+HIKK+FDRSYGSGWQCVVGSNFGCFFTHSKG+FIYFSLETLNFLIFKAASN
Subjt:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAASN

XP_038878771.1 dynein light chain 1, cytoplasmic-like [Benincasa hispida]8.7e-4193.55Show/hide
Query:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAASN
        MLEGKATVKETDMSEKMQ HAMASASHALDLFDVSD LSLA+HIKKDFDR+YGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFK+ SN
Subjt:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAASN

TrEMBL top hitse value%identityAlignment
A0A1S3CJ38 Dynein light chain2.6e-3890.22Show/hide
Query:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAAS
        MLEGKATVKETDMSEKMQ+HAMASASHALDLFDVSD LSLAS+IKKDFD +YGSGWQCVVGSNFGCFFTHS G+FIYFSLETLNFLIFK+ S
Subjt:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAAS

A0A1S3UQ79 Dynein light chain2.4e-3680.65Show/hide
Query:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAASN
        MLEGKA VKETDMS KMQIHAMA+ASHALDL+DVSDC+S+A+HIKK+FD  YG+GWQCVVGSNFGC+FTHS G+FIYF+LETLNFLIFK +S+
Subjt:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAASN

A0A6J1CTX2 Dynein light chain2.4e-3687.64Show/hide
Query:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFK
        MLEGK  VKETDMSEKMQIHAMASASHALDLFDVSDCLSLA+HIKK+FDR+YG GWQCVVGSNFG FFTHS  +FIYF+LETLNFLIFK
Subjt:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFK

A0A6J1EZZ1 Dynein light chain2.2e-4294.62Show/hide
Query:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAASN
        MLEGKATVK+TDMSEKMQIHA ASASHALDLFDVSDCLSLA+HIKK+FDRSYGSGWQCVVGSNFGCFFTHSKG+FIYFSLETLNFLIFKAASN
Subjt:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAASN

A0A6J1I806 Dynein light chain2.2e-4294.62Show/hide
Query:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAASN
        MLEGKATVK+TDMSEKMQIHA ASASHALDLFDVSDCLSLA+HIKK+FDRSYGSGWQCVVGSNFGCFFTHSKG+FIYFSLETLNFLIFKAASN
Subjt:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAASN

SwissProt top hitse value%identityAlignment
P61273 Dynein light chain 1, cytoplasmic4.2e-1442.22Show/hide
Query:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKA
        M + KA +K  DMSE+MQ  ++  A+ AL+ +++     +A+HIKK+FD+ Y   W C+VG NFG + TH    FIYF L  +  L+FK+
Subjt:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKA

P61285 Dynein light chain 1, cytoplasmic4.2e-1442.22Show/hide
Query:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKA
        M + KA +K  DMSE+MQ  ++  A+ AL+ +++     +A+HIKK+FD+ Y   W C+VG NFG + TH    FIYF L  +  L+FK+
Subjt:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKA

P63167 Dynein light chain 1, cytoplasmic4.2e-1442.22Show/hide
Query:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKA
        M + KA +K  DMSE+MQ  ++  A+ AL+ +++     +A+HIKK+FD+ Y   W C+VG NFG + TH    FIYF L  +  L+FK+
Subjt:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKA

P63168 Dynein light chain 1, cytoplasmic4.2e-1442.22Show/hide
Query:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKA
        M + KA +K  DMSE+MQ  ++  A+ AL+ +++     +A+HIKK+FD+ Y   W C+VG NFG + TH    FIYF L  +  L+FK+
Subjt:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKA

Q94758 Dynein light chain1.5e-1446.67Show/hide
Query:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKA
        M E KA +K  DMSE+MQ  A+  A+ A+D  D+     +A++IKKDFDR Y   W C+VG +FG + TH   +FIYF L+   FL+FK+
Subjt:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKA

Arabidopsis top hitse value%identityAlignment
AT1G52240.1 RHO guanyl-nucleotide exchange factor 113.8e-1871.19Show/hide
Query:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCV
        MLEGKA V+++DM  KMQ+ AMA AS ALDLFDV DC S+A HIKK+FD  YGSGWQCV
Subjt:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCV

AT1G52240.2 RHO guanyl-nucleotide exchange factor 111.5e-3577.17Show/hide
Query:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAAS
        MLEGKA V+++DM  KMQ+ AMA AS ALDLFDV DC S+A HIKK+FD  YGSGWQCVVGSNFGCFFTHSKG+FIYF LETL FLIFK AS
Subjt:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAAS

AT3G16120.1 Dynein light chain type 1 family protein6.4e-3473.91Show/hide
Query:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAAS
        MLEGKA V+ETDM  KMQ+ AM  AS +LDLFDV D +S+A+HIKK+FD  YGSGWQCVVG+NFGCFFTHSKG+FIYF L TLNFLIFK A+
Subjt:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAAS

AT4G27360.1 Dynein light chain type 1 family protein3.9e-2354.95Show/hide
Query:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAA
        MLEGKA + +TDM + M+  A++ AS ALD FDV++   +A  IKK+FDRSYGSGWQC+VG++FG F TH  G FI+FS+ +L  L+FK +
Subjt:  MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAA

AT5G20110.1 Dynein light chain type 1 family protein1.5e-1447.44Show/hide
Query:  DMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFK
        DM   MQ HA   A   LD  +      +A ++KK+FD+ YG  W C+VGS+FG F THS G FIYFS++ L  L+FK
Subjt:  DMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAAGGGAAGGCCACCGTCAAAGAAACCGACATGTCGGAAAAGATGCAGATTCACGCCATGGCCTCTGCCTCTCACGCCCTCGATCTCTTCGACGTCTCCGATTG
CCTCTCCCTCGCTTCCCACATCAAGAAGGATTTTGATCGGAGTTACGGAAGTGGCTGGCAGTGCGTGGTGGGTTCCAATTTCGGCTGCTTCTTCACTCATTCAAAGGGGA
GTTTCATTTATTTTTCTCTTGAAACTCTCAATTTTCTCATCTTTAAAGCTGCTTCTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAAGGGAAGGCCACCGTCAAAGAAACCGACATGTCGGAAAAGATGCAGATTCACGCCATGGCCTCTGCCTCTCACGCCCTCGATCTCTTCGACGTCTCCGATTG
CCTCTCCCTCGCTTCCCACATCAAGAAGGATTTTGATCGGAGTTACGGAAGTGGCTGGCAGTGCGTGGTGGGTTCCAATTTCGGCTGCTTCTTCACTCATTCAAAGGGGA
GTTTCATTTATTTTTCTCTTGAAACTCTCAATTTTCTCATCTTTAAAGCTGCTTCTAATTAA
Protein sequenceShow/hide protein sequence
MLEGKATVKETDMSEKMQIHAMASASHALDLFDVSDCLSLASHIKKDFDRSYGSGWQCVVGSNFGCFFTHSKGSFIYFSLETLNFLIFKAASN