; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022660 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022660
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRING-type domain-containing protein
Genome locationscaffold2:6007680..6010540
RNA-Seq ExpressionSpg022660
SyntenySpg022660
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR027370 - RING-type zinc-finger, LisH dimerisation motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK06338.1 uncharacterized protein E5676_scaffold163G00020 [Cucumis melo var. makuwa]1.9e-9686.27Show/hide
Query:  MGKRKRGSDQTHPDRPLHLSGIVPFSSQMDVRSEEDQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHID
        MGKRKRGSDQTH D PLHLSG+VPFS+Q DVRSEED SLARP+FMKRSRH Y+HQYCRRGSTSQAN STSRENRVRT+LEERPAFKFAAHCNSEFPD I+
Subjt:  MGKRKRGSDQTHPDRPLHLSGIVPFSSQMDVRSEEDQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHID

Query:  GIESTFWGPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLC--MEPPVDDSKE
         IESTF GPERIRYNSLGKD ISSH +RM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLENRS+VEDRSDPPCPLC  + P VDDSK 
Subjt:  GIESTFWGPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLC--MEPPVDDSKE

Query:  GEQQ
        GEQ+
Subjt:  GEQQ

XP_008443927.1 PREDICTED: uncharacterized protein LOC103487402 isoform X2 [Cucumis melo]6.4e-9786.76Show/hide
Query:  MGKRKRGSDQTHPDRPLHLSGIVPFSSQMDVRSEEDQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHID
        MGKRKRGSDQTH D PLHLSG+VPFS+Q DVRSEED SLARP+FMKRSRH Y+HQYCRRGSTSQAN STSRENRVRT+LEERPAFKFAAHCNSEFPD I+
Subjt:  MGKRKRGSDQTHPDRPLHLSGIVPFSSQMDVRSEEDQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHID

Query:  GIESTFWGPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLC--MEPPVDDSKE
         IESTF GPERIRYNSLGKD ISSH MRM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLENRS+VEDRSDPPCPLC  + P VDDSK 
Subjt:  GIESTFWGPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLC--MEPPVDDSKE

Query:  GEQQ
        GEQ+
Subjt:  GEQQ

XP_022134599.1 uncharacterized protein LOC111006826 [Momordica charantia]2.2e-9787.19Show/hide
Query:  MGKRKR-GSDQTHPDRPLHLSGIVPFSSQMDVRSEEDQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHI
        MGKRKR  SD THPD PLHLSG+VPFS+QMDV SEEDQSLARPVFMKRSRHQY+HQYCRRGSTSQAN STSRENRVRT+LEERPAFKFAAHCNSEFP+HI
Subjt:  MGKRKR-GSDQTHPDRPLHLSGIVPFSSQMDVRSEEDQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHI

Query:  DGIESTFWGPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLCMEP--PVDDSK
        + IE+TFWGPERIRY+SLGKD ISSHG+RMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLE RS VEDRSDPPCPLC EP   +DDSK
Subjt:  DGIESTFWGPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLCMEP--PVDDSK

Query:  EGE
         G+
Subjt:  EGE

XP_038878631.1 uncharacterized protein LOC120070818 isoform X1 [Benincasa hispida]1.4e-9987.8Show/hide
Query:  MGKRKRGSDQTHPDRPLHLSGIVPFSSQMDVRSEE-DQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHI
        MGKRKRGSDQTH D PLHLSG+VPFS+QMDVRSEE D+S ARPVFMKRSRHQY+HQYCRRGSTS AN S SRENRV+T+LEERPAFKFAAHCNSEFPDHI
Subjt:  MGKRKRGSDQTHPDRPLHLSGIVPFSSQMDVRSEE-DQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHI

Query:  DGIESTFWGPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLCMEPP--VDDSK
        + IE TFWGPERIRYNS GKD  SSHGMRM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLENRSNVEDRSDPPCPLCMEPP  VDDSK
Subjt:  DGIESTFWGPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLCMEPP--VDDSK

Query:  EGEQQ
         GEQ+
Subjt:  EGEQQ

XP_038878632.1 uncharacterized protein LOC120070818 isoform X2 [Benincasa hispida]5.6e-10188.24Show/hide
Query:  MGKRKRGSDQTHPDRPLHLSGIVPFSSQMDVRSEEDQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHID
        MGKRKRGSDQTH D PLHLSG+VPFS+QMDVRSEED+S ARPVFMKRSRHQY+HQYCRRGSTS AN S SRENRV+T+LEERPAFKFAAHCNSEFPDHI+
Subjt:  MGKRKRGSDQTHPDRPLHLSGIVPFSSQMDVRSEEDQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHID

Query:  GIESTFWGPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLCMEPP--VDDSKE
         IE TFWGPERIRYNS GKD  SSHGMRM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLENRSNVEDRSDPPCPLCMEPP  VDDSK 
Subjt:  GIESTFWGPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLCMEPP--VDDSKE

Query:  GEQQ
        GEQ+
Subjt:  GEQQ

TrEMBL top hitse value%identityAlignment
A0A1S3B956 uncharacterized protein LOC103487402 isoform X23.1e-9786.76Show/hide
Query:  MGKRKRGSDQTHPDRPLHLSGIVPFSSQMDVRSEEDQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHID
        MGKRKRGSDQTH D PLHLSG+VPFS+Q DVRSEED SLARP+FMKRSRH Y+HQYCRRGSTSQAN STSRENRVRT+LEERPAFKFAAHCNSEFPD I+
Subjt:  MGKRKRGSDQTHPDRPLHLSGIVPFSSQMDVRSEEDQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHID

Query:  GIESTFWGPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLC--MEPPVDDSKE
         IESTF GPERIRYNSLGKD ISSH MRM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLENRS+VEDRSDPPCPLC  + P VDDSK 
Subjt:  GIESTFWGPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLC--MEPPVDDSKE

Query:  GEQQ
        GEQ+
Subjt:  GEQQ

A0A5A7U906 RING-type domain-containing protein3.1e-9786.76Show/hide
Query:  MGKRKRGSDQTHPDRPLHLSGIVPFSSQMDVRSEEDQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHID
        MGKRKRGSDQTH D PLHLSG+VPFS+Q DVRSEED SLARP+FMKRSRH Y+HQYCRRGSTSQAN STSRENRVRT+LEERPAFKFAAHCNSEFPD I+
Subjt:  MGKRKRGSDQTHPDRPLHLSGIVPFSSQMDVRSEEDQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHID

Query:  GIESTFWGPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLC--MEPPVDDSKE
         IESTF GPERIRYNSLGKD ISSH MRM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLENRS+VEDRSDPPCPLC  + P VDDSK 
Subjt:  GIESTFWGPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLC--MEPPVDDSKE

Query:  GEQQ
        GEQ+
Subjt:  GEQQ

A0A5D3C5B4 RING-type domain-containing protein9.0e-9786.27Show/hide
Query:  MGKRKRGSDQTHPDRPLHLSGIVPFSSQMDVRSEEDQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHID
        MGKRKRGSDQTH D PLHLSG+VPFS+Q DVRSEED SLARP+FMKRSRH Y+HQYCRRGSTSQAN STSRENRVRT+LEERPAFKFAAHCNSEFPD I+
Subjt:  MGKRKRGSDQTHPDRPLHLSGIVPFSSQMDVRSEEDQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHID

Query:  GIESTFWGPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLC--MEPPVDDSKE
         IESTF GPERIRYNSLGKD ISSH +RM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLENRS+VEDRSDPPCPLC  + P VDDSK 
Subjt:  GIESTFWGPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLC--MEPPVDDSKE

Query:  GEQQ
        GEQ+
Subjt:  GEQQ

A0A6J1BZ68 uncharacterized protein LOC1110068261.1e-9787.19Show/hide
Query:  MGKRKR-GSDQTHPDRPLHLSGIVPFSSQMDVRSEEDQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHI
        MGKRKR  SD THPD PLHLSG+VPFS+QMDV SEEDQSLARPVFMKRSRHQY+HQYCRRGSTSQAN STSRENRVRT+LEERPAFKFAAHCNSEFP+HI
Subjt:  MGKRKR-GSDQTHPDRPLHLSGIVPFSSQMDVRSEEDQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHI

Query:  DGIESTFWGPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLCMEP--PVDDSK
        + IE+TFWGPERIRY+SLGKD ISSHG+RMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLE RS VEDRSDPPCPLC EP   +DDSK
Subjt:  DGIESTFWGPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLCMEP--PVDDSK

Query:  EGE
         G+
Subjt:  EGE

A0A6J1HAS2 uncharacterized protein LOC111461650 isoform X21.2e-9687.13Show/hide
Query:  MGKRKRGSDQTHPDRPLHLSGIVPFSSQMDVRSEEDQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHID
        MGKRK GSDQTH DRP HLSGIVPFS+QMDVRSEED+SLARP+FMKRSRHQY+HQYCRRGSTS+AN STSRENRVRTILE+RPAFKFAAHCNSEFPDHI+
Subjt:  MGKRKRGSDQTHPDRPLHLSGIVPFSSQMDVRSEEDQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHID

Query:  GIESTFWGPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLCMEPP--VDDSKE
          ESTF  PERIRYNSLGKDTISSHG +++CGICQKLMRRKLCFLGNTLSSSELP+AAVLVCGHVYHADCLEN SNVEDRSDP CPLCMEPP  VDDS E
Subjt:  GIESTFWGPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLCMEPP--VDDSKE

Query:  GE
         E
Subjt:  GE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19680.1 RING/U-box superfamily protein2.6e-1137.21Show/hide
Query:  GPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLCMEPPV
        G  R+   S  + + S    +  CG C KL+  +     + ++  +LP+ AVL CGHVYHA CLE  +N  ++ DP CP+C E  V
Subjt:  GPERIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLCMEPPV

AT1G75400.1 RING/U-box superfamily protein1.5e-1144.26Show/hide
Query:  RMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLC
        + +CG C KL+  +     +++++ ELP+AAVL CGHVYHA+CLE  +   ++ DP CP+C
Subjt:  RMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLC

AT4G39140.1 RING/U-box superfamily protein9.8e-1140.51Show/hide
Query:  LGKDTISSHGMRM------LCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLC
        L +D I  HG RM       CG C + L  + L        ++EL V+A+L CGHVYH +CLE  +   D+ DP CP+C
Subjt:  LGKDTISSHGMRM------LCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLC

AT4G39140.2 RING/U-box superfamily protein9.8e-1140.51Show/hide
Query:  LGKDTISSHGMRM------LCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLC
        L +D I  HG RM       CG C + L  + L        ++EL V+A+L CGHVYH +CLE  +   D+ DP CP+C
Subjt:  LGKDTISSHGMRM------LCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLC

AT4G39140.3 RING/U-box superfamily protein9.8e-1140.51Show/hide
Query:  LGKDTISSHGMRM------LCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLC
        L +D I  HG RM       CG C + L  + L        ++EL V+A+L CGHVYH +CLE  +   D+ DP CP+C
Subjt:  LGKDTISSHGMRM------LCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGCGCAAGCGAGGCTCTGATCAGACCCACCCCGATCGTCCTCTTCATCTCTCCGGTATAGTGCCTTTTTCCAGTCAAATGGATGTGCGGTCAGAAGAGGATCA
GAGTCTTGCTCGTCCAGTATTCATGAAACGTTCACGTCATCAGTATAACCATCAATATTGTCGGCGAGGTTCAACCAGTCAAGCAAATCCATCCACCTCTCGTGAAAACC
GAGTCAGAACAATACTTGAAGAGCGACCCGCCTTTAAGTTTGCTGCTCATTGCAACTCAGAGTTTCCAGACCATATAGATGGCATCGAGAGCACCTTTTGGGGGCCAGAA
AGGATAAGGTACAATTCCTTAGGGAAGGATACAATTTCATCTCATGGAATGAGAATGCTGTGTGGGATCTGTCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTCGGCAA
CACGCTTTCTTCCAGCGAACTCCCTGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGACTGTCTGGAGAACAGGTCAAATGTCGAAGATAGGAGCGATCCAC
CTTGTCCATTGTGCATGGAACCGCCTGTCGACGACTCAAAAGAAGGAGAACAGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAGCGCAAGCGAGGCTCTGATCAGACCCACCCCGATCGTCCTCTTCATCTCTCCGGTATAGTGCCTTTTTCCAGTCAAATGGATGTGCGGTCAGAAGAGGATCA
GAGTCTTGCTCGTCCAGTATTCATGAAACGTTCACGTCATCAGTATAACCATCAATATTGTCGGCGAGGTTCAACCAGTCAAGCAAATCCATCCACCTCTCGTGAAAACC
GAGTCAGAACAATACTTGAAGAGCGACCCGCCTTTAAGTTTGCTGCTCATTGCAACTCAGAGTTTCCAGACCATATAGATGGCATCGAGAGCACCTTTTGGGGGCCAGAA
AGGATAAGGTACAATTCCTTAGGGAAGGATACAATTTCATCTCATGGAATGAGAATGCTGTGTGGGATCTGTCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTCGGCAA
CACGCTTTCTTCCAGCGAACTCCCTGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGACTGTCTGGAGAACAGGTCAAATGTCGAAGATAGGAGCGATCCAC
CTTGTCCATTGTGCATGGAACCGCCTGTCGACGACTCAAAAGAAGGAGAACAGCAATGA
Protein sequenceShow/hide protein sequence
MGKRKRGSDQTHPDRPLHLSGIVPFSSQMDVRSEEDQSLARPVFMKRSRHQYNHQYCRRGSTSQANPSTSRENRVRTILEERPAFKFAAHCNSEFPDHIDGIESTFWGPE
RIRYNSLGKDTISSHGMRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLENRSNVEDRSDPPCPLCMEPPVDDSKEGEQQ