CuGenDBv2

Gene ID	Spg022662
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	F-box/LRR-repeat protein 10
Genome location	scaffold2:15318713..15319489
RNA-Seq Expression	Spg022662
Synteny	Spg022662
Gene Ontology terms	GO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process) GO:0019005 - SCF ubiquitin ligase complex (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001810 - F-box domain IPR036047 - F-box-like domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0040326.1 F-box/LRR-repeat protein 10 isoform X2 [Cucumis melo var. makuwa]

2.1e-47

88.6

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Query:  MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSL
        MAD DGS++SLDLLPSAVLATIMTKLD  SICS+ASTCR F SCASQIL FLP FHLLEISPTVEFL+PLLPPNPFLRSLKVDCGQL DSAIQLLLKPSL
Subjt:  MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSL

Query:  HEFCLHNCADFSGK
        HE CLHNCADFSGK
Subjt:  HEFCLHNCADFSGK

KAG6589027.1 F-box/LRR-repeat protein 10, partial [Cucurbita argyrosperma subsp. sororia]

7.9e-47

88.6

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Query:  MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSL
        MADE+GS+ESLD LPSAVLATIMTKLD  SICSIASTC TF SCASQ+L FLPNFHLLEISPTVEFL+PLLPPNPFLRSLKVDCGQL DSAIQLLLKPSL
Subjt:  MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSL

Query:  HEFCLHNCADFSGK
        HE  LHNCADFSGK
Subjt:  HEFCLHNCADFSGK

XP_004144867.1 F-box/LRR-repeat protein 10 isoform X1 [Cucumis sativus]

1.6e-47

88.6

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Query:  MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSL
        MAD DGS+ESLDLLPSAVLATIMT LD  SICS+ASTCRTF SCASQIL FLP FHLLEISPTVEFL+PLLPPNPFLRSLKVDCGQL DSAI+LLLKPSL
Subjt:  MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSL

Query:  HEFCLHNCADFSGK
        HE CLHNCADFSGK
Subjt:  HEFCLHNCADFSGK

XP_023529644.1 F-box/LRR-repeat protein 10 isoform X1 [Cucurbita pepo subsp. pepo]

7.9e-47

88.6

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Query:  MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSL
        MADE+GS+ESLD LPSAVLATIMTKLD  SICSIASTC TF SCASQ+L FLPNFHLLEISPTVEFL+PLLPPNPFLRSLKVDCGQL DSAIQLLLKPSL
Subjt:  MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSL

Query:  HEFCLHNCADFSGK
        HE  LHNCADFSGK
Subjt:  HEFCLHNCADFSGK

XP_038888116.1 F-box/LRR-repeat protein 10 isoform X1 [Benincasa hispida]

1.9e-48

89.47

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Query:  MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSL
        MAD DGS+ESLDLLPSAVLATIMTKLD  SICS+ASTCRTF SCASQIL FLP+FHLLEISPTVEFL+PLLPPNPFLRSLKVDCGQL DSAIQLLLKPSL
Subjt:  MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSL

Query:  HEFCLHNCADFSGK
        HE CLHNC+DFSGK
Subjt:  HEFCLHNCADFSGK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K2N0 F-box domain-containing protein

7.7e-48

88.6

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Query:  MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSL
        MAD DGS+ESLDLLPSAVLATIMT LD  SICS+ASTCRTF SCASQIL FLP FHLLEISPTVEFL+PLLPPNPFLRSLKVDCGQL DSAI+LLLKPSL
Subjt:  MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSL

Query:  HEFCLHNCADFSGK
        HE CLHNCADFSGK
Subjt:  HEFCLHNCADFSGK

A0A1S3CP38 F-box/LRR-repeat protein 10-like isoform X1

8.5e-47

87.72

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Query:  MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSL
        MAD DGS++SLDLLPSAVLATIMTKLD  SICS+ASTCR F SCASQIL FLP FHLLEISPTVEFL+PLLPPNPFL SLKVDCGQL DSAIQLLLKPSL
Subjt:  MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSL

Query:  HEFCLHNCADFSGK
        HE CLHNCADFSGK
Subjt:  HEFCLHNCADFSGK

A0A5A7TE11 F-box/LRR-repeat protein 10 isoform X2

1.0e-47

88.6

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Query:  MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSL
        MAD DGS++SLDLLPSAVLATIMTKLD  SICS+ASTCR F SCASQIL FLP FHLLEISPTVEFL+PLLPPNPFLRSLKVDCGQL DSAIQLLLKPSL
Subjt:  MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSL

Query:  HEFCLHNCADFSGK
        HE CLHNCADFSGK
Subjt:  HEFCLHNCADFSGK

A0A6J1EQT5 F-box/LRR-repeat protein 10 isoform X1

3.8e-47

88.6

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Query:  MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSL
        MADE+GS+ESLD LPSAVLATIMTKLD  SICSIASTC TF SCASQ+L FLPNFHLLEISPTVEFL+PLLPPNPFLRSLKVDCGQL DSAIQLLLKPSL
Subjt:  MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSL

Query:  HEFCLHNCADFSGK
        HE  LHNCADFSGK
Subjt:  HEFCLHNCADFSGK

A0A6J1JQ15 F-box/LRR-repeat protein 10 isoform X1

9.4e-46

86.84

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Query:  MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSL
        MADE+GS+ESLD LPSAVLATIMTKLD  SICSIASTC TF SCASQ+  FLP+FHLLEISPTVEFL+PLLPPNPFLRSLKVDCGQL DSAIQLLLKPSL
Subjt:  MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSL

Query:  HEFCLHNCADFSGK
        HE  LHNCADFSGK
Subjt:  HEFCLHNCADFSGK

SwissProt top hits

e value

%identity

Alignment

Q9SDA8 F-box/LRR-repeat protein 10

2.7e-29

58.47

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Query:  SLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSLHEFCLHNCA
        SLDLLP+A+L TIMTKLD AS+CS+ASTC+T +SC +++LTF PNFH+  +S ++E ++PLL PN  L SLK+DCG+L +SAI +L++PSL E  LHNC 
Subjt:  SLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSLHEFCLHNCA

Query:  DFSGK--EESGRREKKRR
        DFSG    E GR+ K  R
Subjt:  DFSGK--EESGRREKKRR

Arabidopsis top hits

e value

%identity

Alignment

AT2G17020.1 F-box/RNI-like superfamily protein

1.9e-30

58.47

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Query:  SLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSLHEFCLHNCA
        SLDLLP+A+L TIMTKLD AS+CS+ASTC+T +SC +++LTF PNFH+  +S ++E ++PLL PN  L SLK+DCG+L +SAI +L++PSL E  LHNC 
Subjt:  SLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQL-DSAIQLLLKPSLHEFCLHNCA

Query:  DFSGK--EESGRREKKRR
        DFSG    E GR+ K  R
Subjt:  DFSGK--EESGRREKKRR

Sequences

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CDS sequence

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ATGGCGGACGAGGATGGCAGCATGGAAAGCCTCGATCTCCTGCCTTCTGCTGTCCTCGCTACCATCATGACCAAGCTCGATTTTGCCTCCATCTGCTCCATTGCCTCCAC
GTGCAGGACTTTCGAGTCCTGTGCTTCGCAGATTCTCACTTTTCTCCCCAATTTCCATCTCCTCGAAATTTCTCCAACTGTGGAATTTCTAAAGCCTCTGCTTCCACCAA
ATCCTTTCCTAAGAAGCCTAAAGGTAGATTGTGGTCAGCTTGATTCAGCGATCCAGCTTCTGCTGAAACCTTCCTTGCATGAATTCTGTCTGCATAATTGCGCTGATTTC
AGTGGGAAAGAAGAAAGTGGGAGAAGAGAGAAGAAGAGAAGAGGAGGAGGAAGAGGAGAAAAAGGAAAAAAGAAAAGAAAAGAAAAGAAAAACCGGTGCCACCGGCCGGC
GGCGATCGTCGGTCGTCGGAGTTGA

mRNA sequence

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Protein sequence

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MADEDGSMESLDLLPSAVLATIMTKLDFASICSIASTCRTFESCASQILTFLPNFHLLEISPTVEFLKPLLPPNPFLRSLKVDCGQLDSAIQLLLKPSLHEFCLHNCADF
SGKEESGRREKKRRGGGRGEKGKKKRKEKKNRCHRPAAIVGRRS

Spg022662 (gene) of Sponge gourd (cylindrica) v1 genome