; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022668 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022668
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptiontRNA-specific adenosine deaminase 2
Genome locationscaffold2:2567330..2573555
RNA-Seq ExpressionSpg022668
SyntenySpg022668
Gene Ontology termsGO:0002100 - tRNA wobble adenosine to inosine editing (biological process)
GO:0008270 - zinc ion binding (molecular function)
GO:0052717 - tRNA-specific adenosine-34 deaminase activity (molecular function)
InterPro domainsIPR002125 - Cytidine and deoxycytidylate deaminase domain
IPR016192 - APOBEC/CMP deaminase, zinc-binding
IPR016193 - Cytidine deaminase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021699.1 tRNA-specific adenosine deaminase 2 [Cucurbita argyrosperma subsp. argyrosperma]2.3e-6694.03Show/hide
Query:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI
        ATRHAEMEAIDILIEAWQRDGLSTSEVA K SKCKLYVTCEPCIMCASALSILGI EVYYGCANDKFGGCGSILSLHLGSREAHTSGN QG+GFKCTAGI
Subjt:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ
        MASEAVALFRSFYEQGNPNAP PHRPLVH++AGQ
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ

XP_008453556.1 PREDICTED: tRNA-specific adenosine deaminase 2 isoform X4 [Cucumis melo]1.5e-6593.28Show/hide
Query:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI
        ATRHAEMEAIDILIEAWQRDGLSTSEVA+KFSKCKLYVTCEPCIMCASALSI+GIKEVYYGCANDKFGGCGSILSLHLGS EA TSGN  G+GFKCTAGI
Subjt:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ
        MASEAV LFRSFYEQGNPNAPKPHRPLV+HQAGQ
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ

XP_022135334.1 tRNA-specific adenosine deaminase 2 [Momordica charantia]7.1e-6895.52Show/hide
Query:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI
        ATRHAEMEAIDILIEAW+RDGLSTSEVA+KFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGS EAHTSGN QG+GFKCTAG 
Subjt:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ
        MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ

XP_022933579.1 tRNA-specific adenosine deaminase 2-like [Cucurbita moschata]6.7e-6693.28Show/hide
Query:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI
        ATRHAEMEA DILIEAWQRDGLSTSEVA K SKCKLYVTCEPCIMCASALSILGI EVYYGCANDKFGGCGSILSLHLGSREAHTSGN QG+GFKCTAGI
Subjt:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ
        MASEAVALFRSFYEQGNPNAP PHRPLVH++AGQ
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ

XP_023530916.1 tRNA-specific adenosine deaminase 2-like [Cucurbita pepo subsp. pepo]3.5e-6794.78Show/hide
Query:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI
        ATRHAEMEAIDILIEAWQRDGLSTSEVA K SKCKLYVTCEPCIMCASALSILGI EVYYGCANDKFGGCGSILSLHLGSREAHTSGN QG+GFKCTAGI
Subjt:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ
        MASEAVALFRSFYEQGNPNAP PHRPLVHH+AGQ
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ

TrEMBL top hitse value%identityAlignment
A0A0A0LZX4 CMP/dCMP-type deaminase domain-containing protein7.2e-6693.28Show/hide
Query:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI
        ATRHAEMEAIDILIEAWQRDGLSTSEVA+KFSKCKLYVTCEPCIMCASALSI+GIKEVYYGCANDKFGGCGSILSLHLGS EA TSGN  G+GFKCTAGI
Subjt:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ
        MASEAV LFRSFYEQGNPNAPKPHRPLV+HQAGQ
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ

A0A1S3BVZ1 tRNA-specific adenosine deaminase 2 isoform X47.2e-6693.28Show/hide
Query:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI
        ATRHAEMEAIDILIEAWQRDGLSTSEVA+KFSKCKLYVTCEPCIMCASALSI+GIKEVYYGCANDKFGGCGSILSLHLGS EA TSGN  G+GFKCTAGI
Subjt:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ
        MASEAV LFRSFYEQGNPNAPKPHRPLV+HQAGQ
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ

A0A5D3DXI1 tRNA-specific adenosine deaminase 2 isoform X47.2e-6693.28Show/hide
Query:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI
        ATRHAEMEAIDILIEAWQRDGLSTSEVA+KFSKCKLYVTCEPCIMCASALSI+GIKEVYYGCANDKFGGCGSILSLHLGS EA TSGN  G+GFKCTAGI
Subjt:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ
        MASEAV LFRSFYEQGNPNAPKPHRPLV+HQAGQ
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ

A0A6J1C158 tRNA-specific adenosine deaminase 23.4e-6895.52Show/hide
Query:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI
        ATRHAEMEAIDILIEAW+RDGLSTSEVA+KFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGS EAHTSGN QG+GFKCTAG 
Subjt:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ
        MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ

A0A6J1F059 tRNA-specific adenosine deaminase 2-like3.2e-6693.28Show/hide
Query:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI
        ATRHAEMEA DILIEAWQRDGLSTSEVA K SKCKLYVTCEPCIMCASALSILGI EVYYGCANDKFGGCGSILSLHLGSREAHTSGN QG+GFKCTAGI
Subjt:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ
        MASEAVALFRSFYEQGNPNAP PHRPLVH++AGQ
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQAGQ

SwissProt top hitse value%identityAlignment
Q5E9J7 tRNA-specific adenosine deaminase 29.1e-2642.86Show/hide
Query:  WKMKSRGKAQDTLAKDFGTIFPNKCLLCNKN---AESISHPSLPFCATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILG
        W  ++   A+D L     T  P  CL+   N    +  +  +    ATRHAEM AID  ++  +R G S SEV   F    LYVT EPCIMCA+AL ++ 
Subjt:  WKMKSRGKAQDTLAKDFGTIFPNKCLLCNKN---AESISHPSLPFCATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILG

Query:  IKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGIMASEAVALFRSFYEQGNPNAPK
        I  V YGC N++FGGCGS+L +      A       GK F+CT G  A EAV + ++FY+Q NPNAPK
Subjt:  IKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGIMASEAVALFRSFYEQGNPNAPK

Q5RIV4 tRNA-specific adenosine deaminase 28.5e-2449.59Show/hide
Query:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI
        ATRHAEM A+D +++ W R  L   +      +  LYVT EPCIMCA+AL +L I  V YGC N++FGGCGS+L +       HT     G  FKC AG 
Subjt:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI

Query:  MASEAVALFRSFYEQGNPNAPKP
         A EAV + ++FY+Q NPNAPKP
Subjt:  MASEAVALFRSFYEQGNPNAPKP

Q6IDB6 tRNA-specific adenosine deaminase TAD24.6e-5477.1Show/hide
Query:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI
        ATRHAEMEAID L+  WQ+DGLS S+VA KFSKC LYVTCEPCIMCASALS LGIKEVYYGC NDKFGGCGSILSLHLGS EA      +GKG+KC  GI
Subjt:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ
        MA EAV+LF+ FYEQGNPNAPKPHRP+V  +
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ

Q6P6J0 tRNA-specific adenosine deaminase 21.5e-2349.18Show/hide
Query:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI
        ATRHAEM AID +++   + G S S V   F    LYVT EPCIMCA+AL ++ I  V YGC N++FGGCGS+L++      A       G+ F+C  G 
Subjt:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI

Query:  MASEAVALFRSFYEQGNPNAPK
         A EAV L ++FY+Q NPNAPK
Subjt:  MASEAVALFRSFYEQGNPNAPK

Q7Z6V5 tRNA-specific adenosine deaminase 22.9e-2449.18Show/hide
Query:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI
        ATRHAEM AID +++  ++ G S SEV   F    LYVT EPCIMCA+AL ++ I  V YGC N++FGGCGS+L++      A       G+ F+C  G 
Subjt:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI

Query:  MASEAVALFRSFYEQGNPNAPK
         A EAV + ++FY+Q NPNAPK
Subjt:  MASEAVALFRSFYEQGNPNAPK

Arabidopsis top hitse value%identityAlignment
AT1G48175.1 Cytidine/deoxycytidylate deaminase family protein3.3e-5577.1Show/hide
Query:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI
        ATRHAEMEAID L+  WQ+DGLS S+VA KFSKC LYVTCEPCIMCASALS LGIKEVYYGC NDKFGGCGSILSLHLGS EA      +GKG+KC  GI
Subjt:  ATRHAEMEAIDILIEAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGI

Query:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ
        MA EAV+LF+ FYEQGNPNAPKPHRP+V  +
Subjt:  MASEAVALFRSFYEQGNPNAPKPHRPLVHHQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTCATTGTGCTGTAAGGATGTAGATTCTCTTGATCATCTATTCCTTCACTACCCTTTTGTTGCATCGGGTTGGAGCTGGCTGCTGGGGGAATTCAACATCTCCAC
TTGCTTACCAAACAGTATTGAGGATTGGCGGGTAGAGGTTTTGGTGAGCTGGAAGATGAAGAGCAGAGGAAAGGCCCAGGACACGTTGGCTAAGGATTTTGGGACAATTT
TCCCAAATAAGTGTCTTCTTTGCAACAAAAATGCAGAATCCATCAGTCATCCATCACTGCCCTTTTGCGCTACCAGACACGCAGAAATGGAAGCTATTGACATCCTGATT
GAGGCATGGCAGAGGGATGGACTTTCAACCTCAGAAGTTGCTAATAAATTCTCGAAGTGCAAACTTTATGTTACCTGTGAACCATGTATTATGTGTGCTTCTGCCCTATC
AATACTTGGTATAAAGGAAGTATATTATGGTTGTGCAAACGATAAATTTGGTGGATGTGGATCTATATTGTCACTTCACTTGGGTAGCCGGGAGGCACATACAAGTGGTA
ATGTGCAAGGAAAGGGGTTCAAATGCACTGCAGGAATAATGGCATCAGAAGCAGTTGCTCTTTTTCGAAGTTTTTACGAACAGGGGAATCCCAATGCTCCAAAACCTCAC
AGGCCCCTTGTTCACCATCAGGCAGGTCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCTCATTGTGCTGTAAGGATGTAGATTCTCTTGATCATCTATTCCTTCACTACCCTTTTGTTGCATCGGGTTGGAGCTGGCTGCTGGGGGAATTCAACATCTCCAC
TTGCTTACCAAACAGTATTGAGGATTGGCGGGTAGAGGTTTTGGTGAGCTGGAAGATGAAGAGCAGAGGAAAGGCCCAGGACACGTTGGCTAAGGATTTTGGGACAATTT
TCCCAAATAAGTGTCTTCTTTGCAACAAAAATGCAGAATCCATCAGTCATCCATCACTGCCCTTTTGCGCTACCAGACACGCAGAAATGGAAGCTATTGACATCCTGATT
GAGGCATGGCAGAGGGATGGACTTTCAACCTCAGAAGTTGCTAATAAATTCTCGAAGTGCAAACTTTATGTTACCTGTGAACCATGTATTATGTGTGCTTCTGCCCTATC
AATACTTGGTATAAAGGAAGTATATTATGGTTGTGCAAACGATAAATTTGGTGGATGTGGATCTATATTGTCACTTCACTTGGGTAGCCGGGAGGCACATACAAGTGGTA
ATGTGCAAGGAAAGGGGTTCAAATGCACTGCAGGAATAATGGCATCAGAAGCAGTTGCTCTTTTTCGAAGTTTTTACGAACAGGGGAATCCCAATGCTCCAAAACCTCAC
AGGCCCCTTGTTCACCATCAGGCAGGTCAATGA
Protein sequenceShow/hide protein sequence
MCSLCCKDVDSLDHLFLHYPFVASGWSWLLGEFNISTCLPNSIEDWRVEVLVSWKMKSRGKAQDTLAKDFGTIFPNKCLLCNKNAESISHPSLPFCATRHAEMEAIDILI
EAWQRDGLSTSEVANKFSKCKLYVTCEPCIMCASALSILGIKEVYYGCANDKFGGCGSILSLHLGSREAHTSGNVQGKGFKCTAGIMASEAVALFRSFYEQGNPNAPKPH
RPLVHHQAGQ