; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg022725 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022725
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontransmembrane protein 234 homolog
Genome locationscaffold2:7617950..7619105
RNA-Seq ExpressionSpg022725
SyntenySpg022725
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR018908 - Putative transmembrane family 234
IPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589933.1 Transmembrane protein 234-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.1e-4986.51Show/hide
Query:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVAIG+VWGATNALMRRGALLWDQALKSSSN+T +S KLLSSLRRWLK+LSIWQYTVPFL+NLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEDTRVG-GLVGIWKIEPN
        AVFGMLLGE+TRVG  L G ++ + N
Subjt:  AVFGMLLGEDTRVG-GLVGIWKIEPN

KAG7023602.1 Transmembrane protein-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-4892.98Show/hide
Query:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIG VEKMVAIG+VWGATNALMRRGALLWDQALKSSSN+T +S KLLSSLRRWLKLLSIWQYTVPFL+NLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEDTRVG
        AVFGMLLGE+TRVG
Subjt:  AVFGMLLGEDTRVG

XP_022961299.1 transmembrane protein 234 homolog [Cucurbita moschata]9.0e-4993.86Show/hide
Query:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVAIG+VWGATNALMRRGALLWDQALKSSSN+T +S KLLSSLRRWLKLLSIWQYTVPFL+NLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEDTRVG
        AVFGMLLGE+TRVG
Subjt:  AVFGMLLGEDTRVG

XP_023516356.1 transmembrane protein 234 homolog isoform X1 [Cucurbita pepo subsp. pepo]2.0e-4892.98Show/hide
Query:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVAIG+VWGATNALMRRGALLWDQALKSSSN+T +S KLLSSLRRWLKLLSIWQYT+PFL+NLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEDTRVG
        AVFGMLLGE+TRVG
Subjt:  AVFGMLLGEDTRVG

XP_023516357.1 transmembrane protein 234 homolog isoform X2 [Cucurbita pepo subsp. pepo]2.0e-4892.98Show/hide
Query:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVAIG+VWGATNALMRRGALLWDQALKSSSN+T +S KLLSSLRRWLKLLSIWQYT+PFL+NLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEDTRVG
        AVFGMLLGE+TRVG
Subjt:  AVFGMLLGEDTRVG

TrEMBL top hitse value%identityAlignment
A0A1S4E4M5 transmembrane protein 234 homolog1.1e-4490.35Show/hide
Query:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVAIGLVWGATNALMRRGALLWDQAL+SSS+    STK  SSLRRWLKL SIWQYT+PFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEDTRVG
        AVFG+LLGEDTRVG
Subjt:  AVFGMLLGEDTRVG

A0A5A7VAD4 Transmembrane protein 234-like protein1.1e-4490.35Show/hide
Query:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVAIGLVWGATNALMRRGALLWDQAL+SSS+    STK  SSLRRWLKL SIWQYT+PFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEDTRVG
        AVFG+LLGEDTRVG
Subjt:  AVFGMLLGEDTRVG

A0A6J1CV55 transmembrane protein 234 homolog isoform X37.9e-4386.84Show/hide
Query:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVA+GLVWGATNALMRRGALLWDQAL SSSN +       SSL RWLKLLSIWQYT+PFLLNL+ASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEDTRVG
        AVFGMLLGE TRVG
Subjt:  AVFGMLLGEDTRVG

A0A6J1HBE7 transmembrane protein 234 homolog4.3e-4993.86Show/hide
Query:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVAIG+VWGATNALMRRGALLWDQALKSSSN+T +S KLLSSLRRWLKLLSIWQYTVPFL+NLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEDTRVG
        AVFGMLLGE+TRVG
Subjt:  AVFGMLLGEDTRVG

A0A6J1JK46 transmembrane protein 234 homolog3.7e-4892.11Show/hide
Query:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT
        MIGDVEKMVAIG+ WGATNALMRRGALLWDQALKSSSN+T +S KLLSS RRWLKLLSIWQYTVPFL+NLTASATFFAILSDAPISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAAT

Query:  AVFGMLLGEDTRVG
        AVFGMLLGE+TRVG
Subjt:  AVFGMLLGEDTRVG

SwissProt top hitse value%identityAlignment
A0NGI1 Transmembrane protein 234 homolog2.6e-0633.88Show/hide
Query:  VEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLK---LLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAATA
        V  ++ + ++WGATN  ++RG++ +++ LK+ S         L  L  WL+   L++ WQY +P ++N   S  +   L    +SL VP+ N+ TF  TA
Subjt:  VEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLK---LLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAATA

Query:  VFGMLLGEDTRVGGLVGIWKI
        +   LLGE  R  G    WKI
Subjt:  VFGMLLGEDTRVGGLVGIWKI

Q54ZG7 Transmembrane protein 234 homolog3.2e-0933.96Show/hide
Query:  DVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAATAVF
        ++  ++ +G +WG TN L++RG+    + +         S  +   +  W +      YT+P L+NL+ S  FF  LS   ISL VP++N+ TF  T++ 
Subjt:  DVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAATAVF

Query:  GMLLGE
        GMLLGE
Subjt:  GMLLGE

Q8R1E7 Transmembrane protein 2341.4e-0429.2Show/hide
Query:  GDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAATAV
        G V  +V +  +WG T  L++R +        S        T     L+    L    +Y +PFLLN + S  ++  L+   ++LAVP+ N+     T +
Subjt:  GDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAATAV

Query:  FGMLLGEDTRVGG
         G +LGED  +GG
Subjt:  FGMLLGEDTRVGG

Arabidopsis top hitse value%identityAlignment
AT5G19570.1 unknown protein2.4e-3664.66Show/hide
Query:  DVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHT-----STKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFA
        D++KMVA+GLVWGATNAL+RRGAL WD+   SS+  +H+       K++ +LR W+ LL  WQY++PFL+NL+ASATFFA+LS APISLAVPVTNATTFA
Subjt:  DVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHT-----STKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFA

Query:  ATAVFGMLLGEDTRVG
        ATA FG+LLGE+T++G
Subjt:  ATAVFGMLLGEDTRVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGAGATGTAGAGAAAATGGTTGCGATCGGTCTAGTTTGGGGCGCCACTAACGCTCTGATGCGCCGTGGCGCTCTTCTCTGGGACCAAGCTCTCAAATCTTCTTC
CAATTCAACCCACACTTCGACCAAACTCCTCTCCTCCCTCCGTCGATGGCTCAAGCTCCTCTCAATTTGGCAGTACACAGTCCCCTTTTTGCTTAACCTCACCGCCTCAG
CTACCTTCTTCGCCATTCTAAGTGATGCTCCAATATCGCTCGCCGTTCCGGTCACCAACGCCACAACCTTTGCTGCCACCGCCGTGTTTGGAATGCTCCTTGGCGAAGAT
ACTCGTGTCGGAGGGCTGGTTGGTATATGGAAGATTGAACCAAATGATACGTTTTCCTTCACCTTCTTAATGTGTGATCTCAATCAAGCCCCGGTTGAAACAGCTCCAAA
TACTTACGAGTTAATTTGGAGTGACCATTATCCAAAGAAAGTTGAGTTTTTTCTATGGGAAATCAGCCACAAAGCTTTTAATACTCATGATAAACTACAAAGGAGAATCC
CCTATGTTTCTATCTCTCCCCATCGATGCTCTCTTTGCAAGAATAGCTCGGATTCGCAAGTCCATATGCTTCTGTTATGTGATTTTGTGAAGGCCTATTGGTATATTATT
CTCAAAACTTTTGGATGGTCCGTTGCTCTTCCTAATGACCCTACCCTCCTCCCATCTCTCACTCTTGGGGGTCACCCTTTCGAAGGGGAGAAAAAGCTTCTTTGGATGAA
CTTCATAAGAGCCTTTTGCAGGAGCCTTGAGTGTTTGGCAAGAAAGGAACCGATGGATCTTTCAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGATCGGAGATGTAGAGAAAATGGTTGCGATCGGTCTAGTTTGGGGCGCCACTAACGCTCTGATGCGCCGTGGCGCTCTTCTCTGGGACCAAGCTCTCAAATCTTCTTC
CAATTCAACCCACACTTCGACCAAACTCCTCTCCTCCCTCCGTCGATGGCTCAAGCTCCTCTCAATTTGGCAGTACACAGTCCCCTTTTTGCTTAACCTCACCGCCTCAG
CTACCTTCTTCGCCATTCTAAGTGATGCTCCAATATCGCTCGCCGTTCCGGTCACCAACGCCACAACCTTTGCTGCCACCGCCGTGTTTGGAATGCTCCTTGGCGAAGAT
ACTCGTGTCGGAGGGCTGGTTGGTATATGGAAGATTGAACCAAATGATACGTTTTCCTTCACCTTCTTAATGTGTGATCTCAATCAAGCCCCGGTTGAAACAGCTCCAAA
TACTTACGAGTTAATTTGGAGTGACCATTATCCAAAGAAAGTTGAGTTTTTTCTATGGGAAATCAGCCACAAAGCTTTTAATACTCATGATAAACTACAAAGGAGAATCC
CCTATGTTTCTATCTCTCCCCATCGATGCTCTCTTTGCAAGAATAGCTCGGATTCGCAAGTCCATATGCTTCTGTTATGTGATTTTGTGAAGGCCTATTGGTATATTATT
CTCAAAACTTTTGGATGGTCCGTTGCTCTTCCTAATGACCCTACCCTCCTCCCATCTCTCACTCTTGGGGGTCACCCTTTCGAAGGGGAGAAAAAGCTTCTTTGGATGAA
CTTCATAAGAGCCTTTTGCAGGAGCCTTGAGTGTTTGGCAAGAAAGGAACCGATGGATCTTTCAAGATAA
Protein sequenceShow/hide protein sequence
MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNSTHTSTKLLSSLRRWLKLLSIWQYTVPFLLNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGED
TRVGGLVGIWKIEPNDTFSFTFLMCDLNQAPVETAPNTYELIWSDHYPKKVEFFLWEISHKAFNTHDKLQRRIPYVSISPHRCSLCKNSSDSQVHMLLLCDFVKAYWYII
LKTFGWSVALPNDPTLLPSLTLGGHPFEGEKKLLWMNFIRAFCRSLECLARKEPMDLSR