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Spg022726 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022726
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncysteine-rich and transmembrane domain-containing protein B-like
Genome locationscaffold2:4101617..4102655
RNA-Seq ExpressionSpg022726
SyntenySpg022726
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058026.1 hypothetical protein E6C27_scaffold274G003310 [Cucumis melo var. makuwa]6.2e-2975.56Show/hide
Query:  SCCD-ADTGPGPCPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGLHLLLGMEGPCKGHFAPALLVCLTQVIF
        SCCD ADTGPGP  V PP  DPMQHGQ+QPYPPIVPPQ ETK +TVPP  +TK RGDGFCRGL+LLLGMEGP + H+A AL+V LTQVIF
Subjt:  SCCD-ADTGPGPCPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGLHLLLGMEGPCKGHFAPALLVCLTQVIF

KAE8652444.1 hypothetical protein Csa_013973 [Cucumis sativus]7.1e-1780.7Show/hide
Query:  DTGPGPCPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL
        DTGPGP  VAPPM DPMQHGQ+QPYPPIVPPQ ETK +TVPP  +TK RGDGFCRGL
Subjt:  DTGPGPCPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL

KAG6587617.1 hypothetical protein SDJN03_16182, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2474.7Show/hide
Query:  MSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL--------HLLLGMEGPCKGHFAPALLVCLTQVIFWVP
        M DPMQHGQSQPY  I+PPQ ETKFQ V PPRET S+GDGFCRGL        +LLLGME PCK HFAPALLV LTQVIFWVP
Subjt:  MSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL--------HLLLGMEGPCKGHFAPALLVCLTQVIFWVP

KAG7021578.1 hypothetical protein SDJN02_15304 [Cucurbita argyrosperma subsp. argyrosperma]2.3e-3176.84Show/hide
Query:  DTGPGPCPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL--------HLLLGMEGPCKGHFAPALLVCLTQVIFWVP
        DTGPGP PVAPPM DPMQHGQSQPY  I+PPQ ETKFQ V PPRET S+GDGFCRGL        +LLLGME PCK HFAPALLV LTQVIFWVP
Subjt:  DTGPGPCPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL--------HLLLGMEGPCKGHFAPALLVCLTQVIFWVP

XP_022969088.1 cysteine-rich and transmembrane domain-containing protein B-like [Cucurbita maxima]1.2e-1680.7Show/hide
Query:  DTGPGPCPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL
        DTGPGP PVAPPM DPMQHGQSQPY  I+PPQ ETK Q V PPRET S+GDGFCRGL
Subjt:  DTGPGPCPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL

TrEMBL top hitse value%identityAlignment
A0A0A0LPD8 Uncharacterized protein3.5e-1780.7Show/hide
Query:  DTGPGPCPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL
        DTGPGP  VAPPM DPMQHGQ+QPYPPIVPPQ ETK +TVPP  +TK RGDGFCRGL
Subjt:  DTGPGPCPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL

A0A5A7UV38 Uncharacterized protein3.0e-2975.56Show/hide
Query:  SCCD-ADTGPGPCPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGLHLLLGMEGPCKGHFAPALLVCLTQVIF
        SCCD ADTGPGP  V PP  DPMQHGQ+QPYPPIVPPQ ETK +TVPP  +TK RGDGFCRGL+LLLGMEGP + H+A AL+V LTQVIF
Subjt:  SCCD-ADTGPGPCPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGLHLLLGMEGPCKGHFAPALLVCLTQVIF

A0A6J1HZZ2 cysteine-rich and transmembrane domain-containing protein B-like5.9e-1780.7Show/hide
Query:  DTGPGPCPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL
        DTGPGP PVAPPM DPMQHGQSQPY  I+PPQ ETK Q V PPRET S+GDGFCRGL
Subjt:  DTGPGPCPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGCATTGCTCCTCCGTTTGACTTCACATATATTCTCCTTGAGGCAGTTGGGCAGTATTAAGAATGTATCTTGTTGTTATGCAGTTGGAGTTATAATTTTGGTGCT
GTCTTGCTGTGATGCAGATACTGGACCAGGTCCTTGCCCAGTTGCCCCACCTATGAGTGATCCAATGCAACATGGTCAGTCTCAGCCATACCCTCCAATTGTACCTCCTC
AAGTGGAAACCAAGTTTCAAACTGTACCTCCTCCAAGGGAAACCAAGTCTAGAGGTGATGGGTTTTGCAGAGGATTACATCTGCTTCTAGGGATGGAGGGTCCTTGCAAA
GGTCACTTTGCCCCTGCACTTCTAGTTTGTCTGACACAAGTTATCTTCTGGGTTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGCATTGCTCCTCCGTTTGACTTCACATATATTCTCCTTGAGGCAGTTGGGCAGTATTAAGAATGTATCTTGTTGTTATGCAGTTGGAGTTATAATTTTGGTGCT
GTCTTGCTGTGATGCAGATACTGGACCAGGTCCTTGCCCAGTTGCCCCACCTATGAGTGATCCAATGCAACATGGTCAGTCTCAGCCATACCCTCCAATTGTACCTCCTC
AAGTGGAAACCAAGTTTCAAACTGTACCTCCTCCAAGGGAAACCAAGTCTAGAGGTGATGGGTTTTGCAGAGGATTACATCTGCTTCTAGGGATGGAGGGTCCTTGCAAA
GGTCACTTTGCCCCTGCACTTCTAGTTTGTCTGACACAAGTTATCTTCTGGGTTCCATGA
Protein sequenceShow/hide protein sequence
MFALLLRLTSHIFSLRQLGSIKNVSCCYAVGVIILVLSCCDADTGPGPCPVAPPMSDPMQHGQSQPYPPIVPPQVETKFQTVPPPRETKSRGDGFCRGLHLLLGMEGPCK
GHFAPALLVCLTQVIFWVP