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Spg022728 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg022728
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionvacuolar protein sorting-associated protein 27-like isoform X2
Genome locationscaffold2:9890170..9890610
RNA-Seq ExpressionSpg022728
SyntenySpg022728
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR011011 - Zinc finger, FYVE/PHD-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588113.1 Rabankyrin-5, partial [Cucurbita argyrosperma subsp. sororia]5.7e-1379.17Show/hide
Query:  MLAEPPPFLEAARCEVCKCSFNTFQRRHHCR------CHEHSSYQMVL
        MLAEPPPF EAARCEVCKCSFNTF+RRHHCR      CHEHSS+QM L
Subjt:  MLAEPPPFLEAARCEVCKCSFNTFQRRHHCR------CHEHSSYQMVL
KAG7022008.1 VPS27 [Cucurbita argyrosperma subsp. argyrosperma]5.7e-1379.17Show/hide
Query:  MLAEPPPFLEAARCEVCKCSFNTFQRRHHCR------CHEHSSYQMVL
        MLAEPPPF EAARCEVCKCSFNTF+RRHHCR      CHEHSS+QM L
Subjt:  MLAEPPPFLEAARCEVCKCSFNTFQRRHHCR------CHEHSSYQMVL
XP_022968016.1 vacuolar protein sorting-associated protein 27-like isoform X1 [Cucurbita maxima]5.7e-1379.17Show/hide
Query:  MLAEPPPFLEAARCEVCKCSFNTFQRRHHCR------CHEHSSYQMVL
        MLAEPPPF EAARCEVCKCSFNTF+RRHHCR      CHEHSS+QM L
Subjt:  MLAEPPPFLEAARCEVCKCSFNTFQRRHHCR------CHEHSSYQMVL
XP_022968041.1 vacuolar protein sorting-associated protein 27-like isoform X2 [Cucurbita maxima]5.7e-1379.17Show/hide
Query:  MLAEPPPFLEAARCEVCKCSFNTFQRRHHCR------CHEHSSYQMVL
        MLAEPPPF EAARCEVCKCSFNTF+RRHHCR      CHEHSS+QM L
Subjt:  MLAEPPPFLEAARCEVCKCSFNTFQRRHHCR------CHEHSSYQMVL
XP_023531352.1 potassium channel KOR2-like isoform X1 [Cucurbita pepo subsp. pepo]5.7e-1379.17Show/hide
Query:  MLAEPPPFLEAARCEVCKCSFNTFQRRHHCR------CHEHSSYQMVL
        MLAEPPPF EAARCEVCKCSFNTF+RRHHCR      CHEHSS+QM L
Subjt:  MLAEPPPFLEAARCEVCKCSFNTFQRRHHCR------CHEHSSYQMVL
TrEMBL top hitse value%identityAlignment
A0A6J1EN28 potassium channel KOR2-like isoform X38.0e-1377.08Show/hide
Query:  MLAEPPPFLEAARCEVCKCSFNTFQRRHHCR------CHEHSSYQMVL
        ML EPPPF EAARCEVCKCSFNTF+RRHHCR      CHEHSS+QM L
Subjt:  MLAEPPPFLEAARCEVCKCSFNTFQRRHHCR------CHEHSSYQMVL
A0A6J1ESF6 vacuolar protein sorting-associated protein 27-like isoform X28.0e-1377.08Show/hide
Query:  MLAEPPPFLEAARCEVCKCSFNTFQRRHHCR------CHEHSSYQMVL
        ML EPPPF EAARCEVCKCSFNTF+RRHHCR      CHEHSS+QM L
Subjt:  MLAEPPPFLEAARCEVCKCSFNTFQRRHHCR------CHEHSSYQMVL
A0A6J1EUN7 vacuolar protein sorting-associated protein 27-like isoform X18.0e-1377.08Show/hide
Query:  MLAEPPPFLEAARCEVCKCSFNTFQRRHHCR------CHEHSSYQMVL
        ML EPPPF EAARCEVCKCSFNTF+RRHHCR      CHEHSS+QM L
Subjt:  MLAEPPPFLEAARCEVCKCSFNTFQRRHHCR------CHEHSSYQMVL
A0A6J1HTP4 vacuolar protein sorting-associated protein 27-like isoform X12.8e-1379.17Show/hide
Query:  MLAEPPPFLEAARCEVCKCSFNTFQRRHHCR------CHEHSSYQMVL
        MLAEPPPF EAARCEVCKCSFNTF+RRHHCR      CHEHSS+QM L
Subjt:  MLAEPPPFLEAARCEVCKCSFNTFQRRHHCR------CHEHSSYQMVL
A0A6J1HTR8 vacuolar protein sorting-associated protein 27-like isoform X22.8e-1379.17Show/hide
Query:  MLAEPPPFLEAARCEVCKCSFNTFQRRHHCR------CHEHSSYQMVL
        MLAEPPPF EAARCEVCKCSFNTF+RRHHCR      CHEHSS+QM L
Subjt:  MLAEPPPFLEAARCEVCKCSFNTFQRRHHCR------CHEHSSYQMVL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGCGGAGCCTCCTCCTTTCCTGGAAGCAGCGCGCTGCGAAGTCTGCAAATGCAGTTTCAACACCTTCCAGCGACGGCATCATTGCCGATGCCACGAGCATTCTTC
TTATCAAATGGTATTATGCGCTCCTTGCCTTGCCGCATTCATTCCTCTGTTAGAGTTTGTGCGGACTGTTTCAATAACTCCTCGCAGTAAGTCATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGCGGAGCCTCCTCCTTTCCTGGAAGCAGCGCGCTGCGAAGTCTGCAAATGCAGTTTCAACACCTTCCAGCGACGGCATCATTGCCGATGCCACGAGCATTCTTC
TTATCAAATGGTATTATGCGCTCCTTGCCTTGCCGCATTCATTCCTCTGTTAGAGTTTGTGCGGACTGTTTCAATAACTCCTCGCAGTAAGTCATCTTGA
Protein sequenceShow/hide protein sequence
MLAEPPPFLEAARCEVCKCSFNTFQRRHHCRCHEHSSYQMVLCAPCLAAFIPLLEFVRTVSITPRSKSS